| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471594
Identifier: 13471594
GI number: 13471594
Start: 1341416
End: 1342345
Strand: Direct
Name: 13471594
Synonym: mlr1612
Alternate gene names: NA
Gene position: 1341416-1342345 (Clockwise)
Preceding gene: 13471592
Following gene: 13471595
Centisome position: 19.06
GC content: 63.44
Gene sequence:
>930_bases ATGCCTTTCAATCAACAACGCATGGTCCGTTCACCGACCGGCGCCGATCTCAATCTCCTCGTCAGCCAGGCTGAAGACGA ACCACGCGCGGTCGTCCAGATCAACCACGGCCTGGCCGAGCACGCCGCGCGCTATGCCCGCTTTGCCGATTTTCTCTCCG CGCGCGGCTTCCACGTCTATGTCCATGACCATCGCGGTCACGGCGCGACCAAGGCGCCTGACGCACCGCTCGGCAAATTC GCCGACGAGGATGGCCCGGCCAAGGTGATCGCCGATGTCGACGCCATCCATGATCTCATCGCCAGCGAATGCCCAGGCCT GCCGGTCATCCTCTTCGGTCATTCGATGGGCGCGTCGGTGGCGCTGAACTACCTTTTGGGCCACTCGCCGCGCATCCATG CCGCCGCGATCTGGAACGGCAATTTTTCGCAAGGGCGGCTTGGGCAGGTGGCGCTCGGCATCCTCGCGTGGGAACGGATG CGGCTGGGCTCCGACGTCCCGTCCCGCTTGTTGCCGAAACTCACCTTTCAGGCCTGGGGCAAGGCGGTGCCCAACCACCG CACGCTGTTCGACTGGCTGTCGCGCGACGAGGCCGAGGTTGCGAAATACATCGCCGACCCGCTGTGCGGCTGGGATGCAT CCGTGTCGATGTGGCGCGACGTTGTCTCGATGGCAATCAACGGCGGCAAGGATGCCACCTTCGCCGGCGTCCGGCGCGAC CTTCCCGTCGCCGTCGTCGGCGGCGAGAAAGATCCCGCCTCGGACTATGGCAAGGGCATCATCCACCTTGCCAATCGCAT GCGTGGGATGGGCTTTTCGAATCTCGTTTCAAAGGTTTACGCCGACACCCGCCACGAAAGCCTGAACGAGCTGAACCGCG ATATCATCATGAACGATTTCGCCACCTGGGCCGACAGCGTGCTGAAATAG
Upstream 100 bases:
>100_bases AAACATCGTCGCGCAAAAGCAATTGCTGTGGATTGACGCAAAACCGGCGCCGGCGCAAGAAAAGCCAACAACGATAAAAT GAGGGAGAGAGCGGGCGGCC
Downstream 100 bases:
>100_bases CGACCTGAATCCTTTTCGAACCGGCCCGTTGGCCTATTGCAAGGGCCGTGACAGCCGATGCCGGGCTTGATAGAGGCTCT GCTTTCGCGGCAATCATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Acylglycerol Lipase; Lipase; Hydrolase; Hydrolase Alpha/Beta Fold Family; Lysophospholipase Protein; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Hydrolase Fold Family; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Carboxylic Ester Hydrolase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Monoacylglycerol Lipase; Monoglyceride Lipase; Alpha/Beta Hydrolase Family Protein; S33 Family Lysophospholipase; Alpha/Beta Fold Family Protein Hydrolase; Aminopeptidase; Hydrolase Alpha/Beta Domain-Containing Protein; Lysophospholipase/Monoglyceride Lipase
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPFNQQRMVRSPTGADLNLLVSQAEDEPRAVVQINHGLAEHAARYARFADFLSARGFHVYVHDHRGHGATKAPDAPLGKF ADEDGPAKVIADVDAIHDLIASECPGLPVILFGHSMGASVALNYLLGHSPRIHAAAIWNGNFSQGRLGQVALGILAWERM RLGSDVPSRLLPKLTFQAWGKAVPNHRTLFDWLSRDEAEVAKYIADPLCGWDASVSMWRDVVSMAINGGKDATFAGVRRD LPVAVVGGEKDPASDYGKGIIHLANRMRGMGFSNLVSKVYADTRHESLNELNRDIIMNDFATWADSVLK
Sequences:
>Translated_309_residues MPFNQQRMVRSPTGADLNLLVSQAEDEPRAVVQINHGLAEHAARYARFADFLSARGFHVYVHDHRGHGATKAPDAPLGKF ADEDGPAKVIADVDAIHDLIASECPGLPVILFGHSMGASVALNYLLGHSPRIHAAAIWNGNFSQGRLGQVALGILAWERM RLGSDVPSRLLPKLTFQAWGKAVPNHRTLFDWLSRDEAEVAKYIADPLCGWDASVSMWRDVVSMAINGGKDATFAGVRRD LPVAVVGGEKDPASDYGKGIIHLANRMRGMGFSNLVSKVYADTRHESLNELNRDIIMNDFATWADSVLK >Mature_308_residues PFNQQRMVRSPTGADLNLLVSQAEDEPRAVVQINHGLAEHAARYARFADFLSARGFHVYVHDHRGHGATKAPDAPLGKFA DEDGPAKVIADVDAIHDLIASECPGLPVILFGHSMGASVALNYLLGHSPRIHAAAIWNGNFSQGRLGQVALGILAWERMR LGSDVPSRLLPKLTFQAWGKAVPNHRTLFDWLSRDEAEVAKYIADPLCGWDASVSMWRDVVSMAINGGKDATFAGVRRDL PVAVVGGEKDPASDYGKGIIHLANRMRGMGFSNLVSKVYADTRHESLNELNRDIIMNDFATWADSVLK
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI6005786, Length=188, Percent_Identity=30.3191489361702, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI51242953, Length=188, Percent_Identity=30.3191489361702, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33753; Mature: 33621
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNQQRMVRSPTGADLNLLVSQAEDEPRAVVQINHGLAEHAARYARFADFLSARGFHVY CCCCCCHHHCCCCCCCHHHEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEE VHDHRGHGATKAPDAPLGKFADEDGPAKVIADVDAIHDLIASECPGLPVILFGHSMGASV EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH ALNYLLGHSPRIHAAAIWNGNFSQGRLGQVALGILAWERMRLGSDVPSRLLPKLTFQAWG HHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KAVPNHRTLFDWLSRDEAEVAKYIADPLCGWDASVSMWRDVVSMAINGGKDATFAGVRRD CCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCC LPVAVVGGEKDPASDYGKGIIHLANRMRGMGFSNLVSKVYADTRHESLNELNRDIIMNDF CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATWADSVLK HHHHHHHCC >Mature Secondary Structure PFNQQRMVRSPTGADLNLLVSQAEDEPRAVVQINHGLAEHAARYARFADFLSARGFHVY CCCCCHHHCCCCCCCHHHEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEE VHDHRGHGATKAPDAPLGKFADEDGPAKVIADVDAIHDLIASECPGLPVILFGHSMGASV EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH ALNYLLGHSPRIHAAAIWNGNFSQGRLGQVALGILAWERMRLGSDVPSRLLPKLTFQAWG HHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KAVPNHRTLFDWLSRDEAEVAKYIADPLCGWDASVSMWRDVVSMAINGGKDATFAGVRRD CCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCC LPVAVVGGEKDPASDYGKGIIHLANRMRGMGFSNLVSKVYADTRHESLNELNRDIIMNDF CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATWADSVLK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA