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The map label for this gene is virR [H]

Identifier: 13471577

GI number: 13471577

Start: 1327362

End: 1327817

Strand: Direct

Name: virR [H]

Synonym: mlr1590

Alternate gene names: 13471577

Gene position: 1327362-1327817 (Clockwise)

Preceding gene: 13471574

Following gene: 13471578

Centisome position: 18.87

GC content: 66.67

Gene sequence:

>456_bases
ATGCCGGCGGATGGCGGCGTCGTCTTCATCGGCCGCATCGCCTCGCCCTGGACGACACGGGAGAGCTGCCCGAAAAACAT
GCGCACGGCGCGCGAGACCGGGCAGCAGGCGGTGCTGACCATCGACGCGCCCTATCGTGAAGGCCTGCGCGGGCTGGAGC
GTGCCAGCCATGTCATCGTCCTGTCCTGGCTGCACCACGCGCCGCGCAATCTGATTGTGCAAAAACCCCGCCATGCGGCT
GAAGCCAAAGGCGTGTTCGGCCTGCGCTCCCCTGCCCGGCCGAACCCGATCGGCCTGCATGTGGCAAGGCTCATCGGATT
GGACATCGCCGCCGGGCGCATCGATCTCGACGCCATCGACGTGCTCGACGGCACGCCGGTCATCGACATCAAGCCCTACT
TCGCCTCGACCGACGCCATACCAGAGGCGATCATCGAAGGACGCGAGGAGCGATGA

Upstream 100 bases:

>100_bases
GATGACAGGCACCAGCACAGAGATGGGCAGAATGACCGGGCCGCGCGAAATGTTCGAGGCACGCGAAGGCGAGCAGAGGC
TGGAACAGGATCCGGCAACG

Downstream 100 bases:

>100_bases
CAGCACCGACCGGCCGCCGCCGCGCCATCGCCAAGGCGCTGACCGCACTTCTGCCGCTGGCGCCCTATGCCGACATGGAA
AAGATCCGCGCCGACGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPADGGVVFIGRIASPWTTRESCPKNMRTARETGQQAVLTIDAPYREGLRGLERASHVIVLSWLHHAPRNLIVQKPRHAA
EAKGVFGLRSPARPNPIGLHVARLIGLDIAAGRIDLDAIDVLDGTPVIDIKPYFASTDAIPEAIIEGREER

Sequences:

>Translated_151_residues
MPADGGVVFIGRIASPWTTRESCPKNMRTARETGQQAVLTIDAPYREGLRGLERASHVIVLSWLHHAPRNLIVQKPRHAA
EAKGVFGLRSPARPNPIGLHVARLIGLDIAAGRIDLDAIDVLDGTPVIDIKPYFASTDAIPEAIIEGREER
>Mature_150_residues
PADGGVVFIGRIASPWTTRESCPKNMRTARETGQQAVLTIDAPYREGLRGLERASHVIVLSWLHHAPRNLIVQKPRHAAE
AKGVFGLRSPARPNPIGLHVARLIGLDIAAGRIDLDAIDVLDGTPVIDIKPYFASTDAIPEAIIEGREER

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=102, Percent_Identity=45.0980392156863, Blast_Score=77, Evalue=6e-15,
Organism=Escherichia coli, GI1786393, Length=142, Percent_Identity=33.8028169014084, Blast_Score=72, Evalue=2e-14,
Organism=Drosophila melanogaster, GI45552503, Length=106, Percent_Identity=41.5094339622642, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 16453; Mature: 16322

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPADGGVVFIGRIASPWTTRESCPKNMRTARETGQQAVLTIDAPYREGLRGLERASHVIV
CCCCCCEEEEEECCCCCCCHHHCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCHHEE
LSWLHHAPRNLIVQKPRHAAEAKGVFGLRSPARPNPIGLHVARLIGLDIAAGRIDLDAID
EHHHHCCCCCCEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCEEE
VLDGTPVIDIKPYFASTDAIPEAIIEGREER
CCCCCCEEEEECCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
PADGGVVFIGRIASPWTTRESCPKNMRTARETGQQAVLTIDAPYREGLRGLERASHVIV
CCCCCEEEEEECCCCCCCHHHCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCHHEE
LSWLHHAPRNLIVQKPRHAAEAKGVFGLRSPARPNPIGLHVARLIGLDIAAGRIDLDAID
EHHHHCCCCCCEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCEEE
VLDGTPVIDIKPYFASTDAIPEAIIEGREER
CCCCCCEEEEECCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA