Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yoaV [H]

Identifier: 13471574

GI number: 13471574

Start: 1323720

End: 1324637

Strand: Direct

Name: yoaV [H]

Synonym: mlr1585

Alternate gene names: 13471574

Gene position: 1323720-1324637 (Clockwise)

Preceding gene: 13471572

Following gene: 13471577

Centisome position: 18.81

GC content: 65.69

Gene sequence:

>918_bases
ATGGCAATTGCCGCTACATCCGCACCACGCGGACCGATGACGCTCACCGACTGGGGGCAGTTGCTGTTGCTTGGCGCCAT
CTGGGGCGGTTCGTTCTTCTTCGCCCGCATCGCGGTGGCGGAGCTTCACCCGCTGGTGCTGGTGCTGTTTCGCGTCGCCA
TCGCGGCAATCGCGCTGCAGATCTATCTCGGCCTGCGCGGTCCGTCCTTCCGCCTTGCCTTTCCCCATGCCGGCCTGTTC
TTCCTGCTGGCCTTCACCAACAATGTCGTCCCCTTCTCGCTGATCTTCGCCGGCCAGACCGAGCTTGGCGCCGGCGTCGC
CTCTGTGCTCAACGCGACGACGCCGTTCTGGACGCTGATCCTCGCCAACGCGCTGACATCGGACGAAAAGCTCTCCTGGA
ACAAGCTCGCCGGCATCGGGCTCGGCGTCGCCGGCACCGCCGTCATGATCGGTCCCGGCCTGCTCGCCGGGCTCGGCGGC
CCGGTCTGGGCAAAATTCGCGCTGATCGGCGCGTCTTTGTCCTATGGCGTCGCGCTGATGGTCGCCCGCCGCTTCAAGGG
CGTGCCCTCGCCGGTCATCGCCACCGGCCAGTTGACCGCCTCGACCATCATCATGATACCGATCGTGCTGCTCACGCACG
GCCCCGCCGACCTGTTCTCGGCCTCGCCGTCAGTCTGGGCGGCGGTGCTGGCGCTGGCGCTTTTGTCCACCGCCTTCGCC
TACATCCTCTACTTCAACCTCGTCGCCTCGGCCGGCGCCACCAACGCCTCGCTGGTCACACTGATCGTGCCGGCCAGCGC
CATGCTGCTCGGTTTTCTTTTCCTGGGCGAACGGCTGGAACTGTTCGAGATTGGTGGCGTGGTGCTGATCGGCCTCGGTC
TCCTCACAATCGACGGACGTGTCCTTGGAAGACGTTAG

Upstream 100 bases:

>100_bases
CCGGCGATCAGGTTTCGGGTGGCGCTTGTCGCCGGACCCGATATGCCTGTGTCTGGCCGGGTGACATTCGAGCCGGCATG
TCGGGGGGAGGACGATCCGC

Downstream 100 bases:

>100_bases
GCGCGAAAATCGAAGTCGATTTTCGCGGCGGTAGCGCTGCCATGACACAGCATCGACACCTCCCCGCCACAATTTATTCA
CAGGTCGGAAGCGGGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAIAATSAPRGPMTLTDWGQLLLLGAIWGGSFFFARIAVAELHPLVLVLFRVAIAAIALQIYLGLRGPSFRLAFPHAGLF
FLLAFTNNVVPFSLIFAGQTELGAGVASVLNATTPFWTLILANALTSDEKLSWNKLAGIGLGVAGTAVMIGPGLLAGLGG
PVWAKFALIGASLSYGVALMVARRFKGVPSPVIATGQLTASTIIMIPIVLLTHGPADLFSASPSVWAAVLALALLSTAFA
YILYFNLVASAGATNASLVTLIVPASAMLLGFLFLGERLELFEIGGVVLIGLGLLTIDGRVLGRR

Sequences:

>Translated_305_residues
MAIAATSAPRGPMTLTDWGQLLLLGAIWGGSFFFARIAVAELHPLVLVLFRVAIAAIALQIYLGLRGPSFRLAFPHAGLF
FLLAFTNNVVPFSLIFAGQTELGAGVASVLNATTPFWTLILANALTSDEKLSWNKLAGIGLGVAGTAVMIGPGLLAGLGG
PVWAKFALIGASLSYGVALMVARRFKGVPSPVIATGQLTASTIIMIPIVLLTHGPADLFSASPSVWAAVLALALLSTAFA
YILYFNLVASAGATNASLVTLIVPASAMLLGFLFLGERLELFEIGGVVLIGLGLLTIDGRVLGRR
>Mature_304_residues
AIAATSAPRGPMTLTDWGQLLLLGAIWGGSFFFARIAVAELHPLVLVLFRVAIAAIALQIYLGLRGPSFRLAFPHAGLFF
LLAFTNNVVPFSLIFAGQTELGAGVASVLNATTPFWTLILANALTSDEKLSWNKLAGIGLGVAGTAVMIGPGLLAGLGGP
VWAKFALIGASLSYGVALMVARRFKGVPSPVIATGQLTASTIIMIPIVLLTHGPADLFSASPSVWAAVLALALLSTAFAY
ILYFNLVASAGATNASLVTLIVPASAMLLGFLFLGERLELFEIGGVVLIGLGLLTIDGRVLGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31627; Mature: 31496

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAATSAPRGPMTLTDWGQLLLLGAIWGGSFFFARIAVAELHPLVLVLFRVAIAAIALQ
CCEECCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLGLRGPSFRLAFPHAGLFFLLAFTNNVVPFSLIFAGQTELGAGVASVLNATTPFWTLI
HHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHH
LANALTSDEKLSWNKLAGIGLGVAGTAVMIGPGLLAGLGGPVWAKFALIGASLSYGVALM
HHHHHCCCCCCCHHHHHCCCCCHHCHHEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VARRFKGVPSPVIATGQLTASTIIMIPIVLLTHGPADLFSASPSVWAAVLALALLSTAFA
HHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
YILYFNLVASAGATNASLVTLIVPASAMLLGFLFLGERLELFEIGGVVLIGLGLLTIDGR
HHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHEECCE
VLGRR
EECCC
>Mature Secondary Structure 
AIAATSAPRGPMTLTDWGQLLLLGAIWGGSFFFARIAVAELHPLVLVLFRVAIAAIALQ
CEECCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLGLRGPSFRLAFPHAGLFFLLAFTNNVVPFSLIFAGQTELGAGVASVLNATTPFWTLI
HHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHH
LANALTSDEKLSWNKLAGIGLGVAGTAVMIGPGLLAGLGGPVWAKFALIGASLSYGVALM
HHHHHCCCCCCCHHHHHCCCCCHHCHHEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VARRFKGVPSPVIATGQLTASTIIMIPIVLLTHGPADLFSASPSVWAAVLALALLSTAFA
HHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
YILYFNLVASAGATNASLVTLIVPASAMLLGFLFLGERLELFEIGGVVLIGLGLLTIDGR
HHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHEECCE
VLGRR
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]