| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471528
Identifier: 13471528
GI number: 13471528
Start: 1267927
End: 1268352
Strand: Reverse
Name: 13471528
Synonym: mll1528
Alternate gene names: NA
Gene position: 1268352-1267927 (Counterclockwise)
Preceding gene: 13471529
Following gene: 13471526
Centisome position: 18.03
GC content: 58.69
Gene sequence:
>426_bases ATGGAAAAGCTCTTCACCAGGATCGCCAATTGGGTCGCTCACATAACCGGCCTGCCGCTGACATTCGCCGGCTGCTGCCT GATCGTTGTCGTCTGGGCGACGAGCGGGCCGTTTTTCGGCTTCTCGGATACCTGGCAATTGGTGATCAACACCGGCACGA CCATCATCACTTTCCTGATGGTGTTCCTGATCCAGAACACCCAGAACCGCGATGGCGCGGCGATCCAGGCCAAGCTCGAT GAACTGATCCGGGTCAGCGAGGGCCATAACAATTTCATCGGCATCGAGCACCTGACGGAATCCGAAGTCGAGGAAATCCG CGACAAGTGTGAGCGGGCGGCACGGCGGCATGACGAAAAAATCGCCGCCATGGCCGCTAAGAAGGCCGTGGCGCAAAAGC GAGCTCCGAAAAAGCACGCGGCTTGA
Upstream 100 bases:
>100_bases TGCGTGTGCCCAATTGCACCCGATGTATTTGTTGCCGGCGGGAACCCGAGACGGTCGCCGGTTGTTTTCTTGTCGCGGCG TTCATTGAGGATCTCGACAG
Downstream 100 bases:
>100_bases GGGCTTTCGGATCAACCTTTGATGAAGGCCGCGAACGCATCCTTGTGATCGGGGTGCCAGCGCGACAGAGCAGGGCGGTT CTGGATGATGTCGCCAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MEKLFTRIANWVAHITGLPLTFAGCCLIVVVWATSGPFFGFSDTWQLVINTGTTIITFLMVFLIQNTQNRDGAAIQAKLD ELIRVSEGHNNFIGIEHLTESEVEEIRDKCERAARRHDEKIAAMAAKKAVAQKRAPKKHAA
Sequences:
>Translated_141_residues MEKLFTRIANWVAHITGLPLTFAGCCLIVVVWATSGPFFGFSDTWQLVINTGTTIITFLMVFLIQNTQNRDGAAIQAKLD ELIRVSEGHNNFIGIEHLTESEVEEIRDKCERAARRHDEKIAAMAAKKAVAQKRAPKKHAA >Mature_141_residues MEKLFTRIANWVAHITGLPLTFAGCCLIVVVWATSGPFFGFSDTWQLVINTGTTIITFLMVFLIQNTQNRDGAAIQAKLD ELIRVSEGHNNFIGIEHLTESEVEEIRDKCERAARRHDEKIAAMAAKKAVAQKRAPKKHAA
Specific function: Unknown
COG id: COG5478
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15720; Mature: 15720
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLFTRIANWVAHITGLPLTFAGCCLIVVVWATSGPFFGFSDTWQLVINTGTTIITFLM CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCHHHHHHHH VFLIQNTQNRDGAAIQAKLDELIRVSEGHNNFIGIEHLTESEVEEIRDKCERAARRHDEK HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHH IAAMAAKKAVAQKRAPKKHAA HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEKLFTRIANWVAHITGLPLTFAGCCLIVVVWATSGPFFGFSDTWQLVINTGTTIITFLM CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCHHHHHHHH VFLIQNTQNRDGAAIQAKLDELIRVSEGHNNFIGIEHLTESEVEEIRDKCERAARRHDEK HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHH IAAMAAKKAVAQKRAPKKHAA HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA