Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yetM [H]

Identifier: 13471440

GI number: 13471440

Start: 1177269

End: 1178534

Strand: Reverse

Name: yetM [H]

Synonym: mll1411

Alternate gene names: 13471440

Gene position: 1178534-1177269 (Counterclockwise)

Preceding gene: 13471441

Following gene: 13471437

Centisome position: 16.75

GC content: 67.38

Gene sequence:

>1266_bases
TTGTCCCGGCCAGTTCGGCTTGGGGGCATCGGCATTTCCTACGACATCGCAATTGCGGGCGCCGGTCCGGCGGGGTTGGC
CGTGGCGCTCTATCTCAAGCGTGCCGGCCACAGGGTCACCATTTTCGAGCGCTTCAACGAGCCGAAGCCTGTCGGTTCCG
GGCTGATCCTGCAGCCGACCGGCTTGACCGTTCTGGCCGATCTCGGACTGCTCGACGATATACTGGCGCTCGGCGCCCGC
ATCGACCGGCTGCATGGCGCCGATGCCTCGACCGGCCGCACCGTGCTCGACGTCCGCTACGACGCCCAGCGCCGCCGCCG
TTTCGGCCTGGCCGTGCACCGTGCGGCGCTGTTCGGCGTGCTTTTCCGCGCCGCCGGGCGTGAGGCCATCGCCATCGAGA
CCGGCGTCGAAATCGAGACGGTGGAAACCGGCGAACGGGCGGTTCTGCTTTGTGGCAATGGACGAAGGGCAGGGCCGTTC
GACCTGGTCGTCGACGCCAGCGGTTCGCGCTCGAAACTGCGGCAGGGCGTGGCCAATGCAGGCGCGCCACGGCCACTCGC
ATATGGCGCCTTCTGGGCATCGCTCGGCTGGCGTGGCGAAGGCTTTGACGAACACGCGCTGCTGCAGCGCTACGACAGGG
CCAGCGTGATGATCGGGGTGCTGCCGATCGGCAGGCCTGAACCGGGCGCCGAAAAGATGGCGGCCTTCTTCTGGAGCCTG
AAGCCTGATGATGCCGACGCGGTGCGCGCTGTCGGCATCGACGCCTGGAAGGAGAGGGTGGTGCGGCTGTGGCCGCAAAG
CGAGGCGTTCACCAGCCAGATCGACAGTTTCGACCAGCTGTCGCTGGCGCGCTACGGCCACCATACGATGGAGCTGCCGG
TTGGCCGCAGGCTAGCCGTCATCGGCGATGCCGCGCATTCGACCAGCCCGCAGCTCGGGCAAGGGGCCAATATGGCACTG
CTAGACGCTGCCGCACTCAGCCACGCGCTGGCGCGCACGCAGAGCATCGAGGCAGCGCTCGAAGCCTATGCCAGGGCGCG
GCGCTGGCATGTGCGTGTCTTCCAGGCGCTGTCATTGGCGTTCACGCCGTTCTACCAGTCGGATTCCGCGGCGCTGCCCT
TCATCCGCGACAGGCTGGTGGCGACCATCGCAAAGATTCCGCCGGCACCGCAGTTTCTGGCCTCGATGGTCGCCGGCACG
GTGATCGATCCGTTCAGGCGGGCAGGGCTTGTCGAAGCGCAGTGGCCGGATCGTTTCGGCGGATAA

Upstream 100 bases:

>100_bases
ATGCGGTGCGCGAGGCACGTGCCGGTTTCGACGCAGCGCAGACTTGAGCGGCCGGGCAGCGTCCGGGGCAGCGACTTGAT
TTCATCCGGCGGCTGAAGGA

Downstream 100 bases:

>100_bases
GGCTCGACAGAAAGGATCCCTTTGCTTGCAGGAAAGCATGGAGGCGCTGCGGATAATCCGGCGCGACGGCGTGTCTGATC
GACGGACGATCATTCAACGC

Product: FAD-dependent monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MSRPVRLGGIGISYDIAIAGAGPAGLAVALYLKRAGHRVTIFERFNEPKPVGSGLILQPTGLTVLADLGLLDDILALGAR
IDRLHGADASTGRTVLDVRYDAQRRRRFGLAVHRAALFGVLFRAAGREAIAIETGVEIETVETGERAVLLCGNGRRAGPF
DLVVDASGSRSKLRQGVANAGAPRPLAYGAFWASLGWRGEGFDEHALLQRYDRASVMIGVLPIGRPEPGAEKMAAFFWSL
KPDDADAVRAVGIDAWKERVVRLWPQSEAFTSQIDSFDQLSLARYGHHTMELPVGRRLAVIGDAAHSTSPQLGQGANMAL
LDAAALSHALARTQSIEAALEAYARARRWHVRVFQALSLAFTPFYQSDSAALPFIRDRLVATIAKIPPAPQFLASMVAGT
VIDPFRRAGLVEAQWPDRFGG

Sequences:

>Translated_421_residues
MSRPVRLGGIGISYDIAIAGAGPAGLAVALYLKRAGHRVTIFERFNEPKPVGSGLILQPTGLTVLADLGLLDDILALGAR
IDRLHGADASTGRTVLDVRYDAQRRRRFGLAVHRAALFGVLFRAAGREAIAIETGVEIETVETGERAVLLCGNGRRAGPF
DLVVDASGSRSKLRQGVANAGAPRPLAYGAFWASLGWRGEGFDEHALLQRYDRASVMIGVLPIGRPEPGAEKMAAFFWSL
KPDDADAVRAVGIDAWKERVVRLWPQSEAFTSQIDSFDQLSLARYGHHTMELPVGRRLAVIGDAAHSTSPQLGQGANMAL
LDAAALSHALARTQSIEAALEAYARARRWHVRVFQALSLAFTPFYQSDSAALPFIRDRLVATIAKIPPAPQFLASMVAGT
VIDPFRRAGLVEAQWPDRFGG
>Mature_420_residues
SRPVRLGGIGISYDIAIAGAGPAGLAVALYLKRAGHRVTIFERFNEPKPVGSGLILQPTGLTVLADLGLLDDILALGARI
DRLHGADASTGRTVLDVRYDAQRRRRFGLAVHRAALFGVLFRAAGREAIAIETGVEIETVETGERAVLLCGNGRRAGPFD
LVVDASGSRSKLRQGVANAGAPRPLAYGAFWASLGWRGEGFDEHALLQRYDRASVMIGVLPIGRPEPGAEKMAAFFWSLK
PDDADAVRAVGIDAWKERVVRLWPQSEAFTSQIDSFDQLSLARYGHHTMELPVGRRLAVIGDAAHSTSPQLGQGANMALL
DAAALSHALARTQSIEAALEAYARARRWHVRVFQALSLAFTPFYQSDSAALPFIRDRLVATIAKIPPAPQFLASMVAGTV
IDPFRRAGLVEAQWPDRFGG

Specific function: Not Yet Known. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789273, Length=409, Percent_Identity=24.6943765281174, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45342; Mature: 45210

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPVRLGGIGISYDIAIAGAGPAGLAVALYLKRAGHRVTIFERFNEPKPVGSGLILQPT
CCCCEEECCEEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCC
GLTVLADLGLLDDILALGARIDRLHGADASTGRTVLDVRYDAQRRRRFGLAVHRAALFGV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
LFRAAGREAIAIETGVEIETVETGERAVLLCGNGRRAGPFDLVVDASGSRSKLRQGVANA
HHHHCCCCEEEEECCCEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCC
GAPRPLAYGAFWASLGWRGEGFDEHALLQRYDRASVMIGVLPIGRPEPGAEKMAAFFWSL
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHCC
KPDDADAVRAVGIDAWKERVVRLWPQSEAFTSQIDSFDQLSLARYGHHTMELPVGRRLAV
CCCCCHHHHHHCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCCCEEEE
IGDAAHSTSPQLGQGANMALLDAAALSHALARTQSIEAALEAYARARRWHVRVFQALSLA
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTPFYQSDSAALPFIRDRLVATIAKIPPAPQFLASMVAGTVIDPFRRAGLVEAQWPDRFG
HCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
G
C
>Mature Secondary Structure 
SRPVRLGGIGISYDIAIAGAGPAGLAVALYLKRAGHRVTIFERFNEPKPVGSGLILQPT
CCCEEECCEEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCC
GLTVLADLGLLDDILALGARIDRLHGADASTGRTVLDVRYDAQRRRRFGLAVHRAALFGV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
LFRAAGREAIAIETGVEIETVETGERAVLLCGNGRRAGPFDLVVDASGSRSKLRQGVANA
HHHHCCCCEEEEECCCEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCC
GAPRPLAYGAFWASLGWRGEGFDEHALLQRYDRASVMIGVLPIGRPEPGAEKMAAFFWSL
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHCC
KPDDADAVRAVGIDAWKERVVRLWPQSEAFTSQIDSFDQLSLARYGHHTMELPVGRRLAV
CCCCCHHHHHHCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCEEECCCCCEEEE
IGDAAHSTSPQLGQGANMALLDAAALSHALARTQSIEAALEAYARARRWHVRVFQALSLA
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTPFYQSDSAALPFIRDRLVATIAKIPPAPQFLASMVAGTVIDPFRRAGLVEAQWPDRFG
HCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]