| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471431
Identifier: 13471431
GI number: 13471431
Start: 1171143
End: 1171859
Strand: Reverse
Name: 13471431
Synonym: mll1399
Alternate gene names: NA
Gene position: 1171859-1171143 (Counterclockwise)
Preceding gene: 13471433
Following gene: 13471426
Centisome position: 16.66
GC content: 63.88
Gene sequence:
>717_bases ATGAGTTTCGACCTGCCACGCAATGTCATCCTGCCGGTCGATGCAATCGACGTCCGGCTTGATTCCGGCCCACATCCTTT CGCCAGGGAAAATGCGGAGGCGATCGCCGAGAACTGGCAGCGCGAGATAGCGGTCAAGCCGGCGCTGTTCGACGGCACGG TGGTGCTGCTGTCGCAACTCGCGTACCGCGACAACCGTCTGGTCGGGCGCTGCCATGCGGTCAACTACTCCACCTTCATG CTTTGGCGGAAGCGGCGCGAGAATTCAGGCGCCGAGCACGCCTATGCCCATGCCATGCTGGTGGCCGGCGACAGTGCGCT GGTGGCGATCCGCATGGGCTCACACACGGTCAATGCCGGGCGCGTCTATTTCGCCGCCGGTTCGTTCGAGCCGGACGACT TTCGCGACGGTCAGGTCGATGTCGACTTCAACATGATCCGCGAGGTTCGCGAGGAGACAGGCCTCGACCTCTCGGCCGCC AGGCGCGGCGTGCGCTGGCACGCCCTGTCAACCACGCGTGGGACCGTCATCTTCCGTCGCTATCATGTCGACGAGCCAGC CGATGAGATCGCGCGGCGAATCTCAGCCTTCGTCGCCAGCGAAACCGATCCGGAGATCGACGGGCCGGTGATCATCCGCC ATGCCGGCGACCTGCCGGACGGGCTGGCATTGCATATGAAGCCGCTGATCGAGTGGCATTTTTCCGGCGTTGACTAA
Upstream 100 bases:
>100_bases TCGGCCGAAAGCGTCGGACCATTGCCCGGTGGCGATCACGCTGGACATGGCTCGATAGGCAAGATTTGGCCTCGATAGGC AGGATTGGGACCTGATACGC
Downstream 100 bases:
>100_bases CGGCGCGCCTTGTCCTGTGCCGCCTTGCGATCGTTGCGGGCCGCGACGAAGAACATGATAAAGCCGATACCCAGCAAGCC GCCCATGGCCATTCCCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; NUDIX Hydrolase Family Protein; Nudix Hydrolase; NTP Pyrophosphohydrolase Protein
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQLAYRDNRLVGRCHAVNYSTFM LWRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAGRVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAA RRGVRWHALSTTRGTVIFRRYHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD
Sequences:
>Translated_238_residues MSFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQLAYRDNRLVGRCHAVNYSTFM LWRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAGRVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAA RRGVRWHALSTTRGTVIFRRYHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD >Mature_237_residues SFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQLAYRDNRLVGRCHAVNYSTFML WRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAGRVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAAR RGVRWHALSTTRGTVIFRRYHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26630; Mature: 26499
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQL CCCCCCCCEEEECCEEEEEECCCCCCCHHCHHHHHHHHHHHHEEECCCCCCCHHHHHHHH AYRDNRLVGRCHAVNYSTFMLWRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAG HHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHEEEEEECCCEEEEEEECCEEECCC RVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAARRGVRWHALSTTRGTVIFRR EEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCEEEEEE YHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD ECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHEECCCCC >Mature Secondary Structure SFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQL CCCCCCCEEEECCEEEEEECCCCCCCHHCHHHHHHHHHHHHEEECCCCCCCHHHHHHHH AYRDNRLVGRCHAVNYSTFMLWRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAG HHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHEEEEEECCCEEEEEEECCEEECCC RVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAARRGVRWHALSTTRGTVIFRR EEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCEEEEEE YHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD ECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA