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The map label for this gene is ycaK [C]

Identifier: 13471345

GI number: 13471345

Start: 1087473

End: 1088060

Strand: Reverse

Name: ycaK [C]

Synonym: mll1286

Alternate gene names: 13471345

Gene position: 1088060-1087473 (Counterclockwise)

Preceding gene: 13471346

Following gene: 13471341

Centisome position: 15.46

GC content: 65.14

Gene sequence:

>588_bases
ATGCGTGTCCTCGTGGTCTATTGCCATCCGGTGCCGGAAAGCTTTTGCGCGGCAATCCGCGACACCGCTCTGGATGTGCT
CAAGGCCAGGGGCTGCCAGGTGCGGCTGCTCGACCTCTATGCCGAGAAATTCGACCCGGTGATGGGCTGCGACGAGCGGC
GCACTTACAACAATCAGGCGCCGCAGGACCCGGCGCTGAAGCCGCATTTCGAACTGCTGGCATGGGCCGAAGCGATCCTG
TTCGTCTATCCGACCTGGTGGTACGGGCTGCCGGCGATGCTGAAGGGCTGGCTCGACCGGGTGTGGGCGACGGACGTCGC
CTTCAAACTGCCGGCGGGCAAGGGGCGGATCAAATCGCTGATGACGCATGTCACCAAGGTCGGCGTCATCACCACTTGCG
GCGCGCCGACCTGGTGGAGCGTCGTCGTCGGCCAGCCCGGGCGCAAGACCTTGCTGCGCGGCATGCGGGCATTGTGCGCG
CGACGCTGCAGCACGTTCTTCCTGGCGCACTATCTGATGGACGCCTCGACGCCAAAGACGCGGGCGGCGTTTCTGGCGAA
GGTGCGGACGAGGTTGGAGCGGTTTTGA

Upstream 100 bases:

>100_bases
CGCCGGTGACTTATCTCGCGCATTACGCGATGAACCTGTCGACCGACCAAACGCGAAAATCCTTCATGACGAAGGTTGCG
GCGAGCATGGATGCATTCTG

Downstream 100 bases:

>100_bases
GCGATGCGCGACTTTCCCTTCTCCCCTTGTGGGAGAAGGTGGCCTCGCGAAGCGAGGTCGGATGAGGGGTGCGTGAAGGA
TCTCTGCTTTGCAGTAATAA

Product: NAD(P)H dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MRVLVVYCHPVPESFCAAIRDTALDVLKARGCQVRLLDLYAEKFDPVMGCDERRTYNNQAPQDPALKPHFELLAWAEAIL
FVYPTWWYGLPAMLKGWLDRVWATDVAFKLPAGKGRIKSLMTHVTKVGVITTCGAPTWWSVVVGQPGRKTLLRGMRALCA
RRCSTFFLAHYLMDASTPKTRAAFLAKVRTRLERF

Sequences:

>Translated_195_residues
MRVLVVYCHPVPESFCAAIRDTALDVLKARGCQVRLLDLYAEKFDPVMGCDERRTYNNQAPQDPALKPHFELLAWAEAIL
FVYPTWWYGLPAMLKGWLDRVWATDVAFKLPAGKGRIKSLMTHVTKVGVITTCGAPTWWSVVVGQPGRKTLLRGMRALCA
RRCSTFFLAHYLMDASTPKTRAAFLAKVRTRLERF
>Mature_195_residues
MRVLVVYCHPVPESFCAAIRDTALDVLKARGCQVRLLDLYAEKFDPVMGCDERRTYNNQAPQDPALKPHFELLAWAEAIL
FVYPTWWYGLPAMLKGWLDRVWATDVAFKLPAGKGRIKSLMTHVTKVGVITTCGAPTWWSVVVGQPGRKTLLRGMRALCA
RRCSTFFLAHYLMDASTPKTRAAFLAKVRTRLERF

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=127, Percent_Identity=30.7086614173228, Blast_Score=74, Evalue=9e-14,
Organism=Escherichia coli, GI1787129, Length=120, Percent_Identity=35.8333333333333, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22134; Mature: 22134

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVVYCHPVPESFCAAIRDTALDVLKARGCQVRLLDLYAEKFDPVMGCDERRTYNNQA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCC
PQDPALKPHFELLAWAEAILFVYPTWWYGLPAMLKGWLDRVWATDVAFKLPAGKGRIKSL
CCCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHH
MTHVTKVGVITTCGAPTWWSVVVGQPGRKTLLRGMRALCARRCSTFFLAHYLMDASTPKT
HHHHHHHHHEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RAAFLAKVRTRLERF
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVLVVYCHPVPESFCAAIRDTALDVLKARGCQVRLLDLYAEKFDPVMGCDERRTYNNQA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCC
PQDPALKPHFELLAWAEAILFVYPTWWYGLPAMLKGWLDRVWATDVAFKLPAGKGRIKSL
CCCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHH
MTHVTKVGVITTCGAPTWWSVVVGQPGRKTLLRGMRALCARRCSTFFLAHYLMDASTPKT
HHHHHHHHHEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RAAFLAKVRTRLERF
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]