| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471308
Identifier: 13471308
GI number: 13471308
Start: 1044569
End: 1046638
Strand: Direct
Name: 13471308
Synonym: mlr1245
Alternate gene names: NA
Gene position: 1044569-1046638 (Clockwise)
Preceding gene: 13471306
Following gene: 13471309
Centisome position: 14.85
GC content: 64.49
Gene sequence:
>2070_bases ATGAACTCGCCTGCCAACATTACCGATCCACTCGTGCTGTTCATGCCGTCGGGCAAGCGCGGGCGGTTTCCTGTCGGCAC GCCGGTGCTCGATGCCGCGCGCCAGCTCGGCGTCTATGTCGAGAGCGTGTGCGGCGGCCGCGCCACGTGCGGGCGCTGCC AGATCGAGGTGCAGGAAGGCAATTTCGCCAAGCACAAGATCGTCTCCTCCAACGACCACATCTCGCCCAAGGGGCCCAAG GAAGAGCGCTACGAGCGCGTGCGCGGCCTGCCTGAGCGGCGTCGCCTCTCCTGCTCTGCGCAGATCCTCGGTGACCTCGT CATCGACGTGCCGCAGGACACGGTCATCAACGCACAGACCATCCGCAAGGATGCCGACACCAGGGTGATCGCCCGCGATA CGGCGATCCGCATGTGCTATGTCGAGATCGAAGAGCCCGACATGCACAAGCCGCTCGGCGACCTTGACCGGCTGAAGATC GCATTGATGAAGGATTGGGGTTTTAAAAACCTCGAATTCGATTTCTACCTGCTGCCGCAGGTGCAAGGCATATTGCGCAA GGGCAACTGGACCGCCACCGCCGCCATCCACAAGGATGCCGACAGCGACATCGCGCGTGTCATCGCGCTGTGGCCTGGCC TCAAGAACGAGGCCTATGGGCTGGCCTGCGATATCGGCTCGACCACCATTGCCATGCATCTGGTGTCGCTGCTGTCAGGC CGCGTCGCCGCTTCGTCCGGCACATCGAACCCGCAGATTCGCTTCGGCGAGGATCTGATGAGCCGCGTCTCCTATGTGAT GATGAATCCGGACGGCCGCGAAGGCATGACGGTGGCCGTGCGCGAGGCGATCTCCAGCCTTGTCGACAAGGTCTGCGCGG AGGGCAATGTCCAGCGCAACGACATCCTGGATTCCGTCTTCGTCGGCAATCCAATCATGCACCATCTGTTCCTCGGCATC GATCCGACCGAACTCGGGGGCGCCCCCTTCGCGCTCGCCGTCTCGGGCGCAGTGCGTATCAAGGCCTCCGACATCGGCCT CAAGCTCAACCAGGGTGCGCGCCTCTATATGCTGCCCTGCATCGCCGGCCATGTCGGCGCCGACGCGGCGGCGGTGACGC TGTCCGAAGGCCCGCATCGCCAGGACGAGATGATGCTGATTGTCGACGTCGGCACCAATGCCGAGATCGTGCTCGGCAAC CGTGCGCGGGTCGTGGCGGCCTCCTCTCCGACCGGTCCGGCTTTCGAAGGCGCCGAAATCTCCGGCGGCCAGCGTGCCGC GCCCGGCGCCATCGAGCGCGTGCGCATCGATCCCGACACGCTGGAACCCAAATACCGCGTCATCGGCTCGGAACTGTGGT CCGATGAGCCCGGCTTCCTCGACAGCGTGCAGGCGACCGGCGTCACCGGCATCTGCGGCTCCGGCATCATCGAGATCGTG GCGGAGATGTATCTCGCCGGCATCATCTCGGAGGATGGCGTCGTCGACGGATCGCTTGCCGCGCGCTCTCCGCGCGTCAC CGCCAATGGCCGTACCTTCTCCTATGTGCTGAAGGAAGGCGAACCGAAGATCACCATCACCCAGACCGATGTGCGCGCCA TCCAGCTCGCCAAGGCAGCCCTCTATGCCGGCACCAAGCTTTTGATGGAAAAGCAGAACACCGAGCATGTCGACCGCATC CACTTCGCCGGCGCCTTCGGCTCCTTCATCGATCCGAAATACGCCATGGTGCTGGGACTGATCCCCGATTGCGACCTCGA CAAGGTCTCGGCCGTCGGCAACGCCGCCGGTGCAGGTGCGCGCATGGCGCTCCTGAACCGTGGTTATCGCCGCGAGATCG AGGAGACGGTGAGCCAGATCGAGAAGATCGAGACCGCGCTGGAACCGAAATTCCAGGAGCATTTCGTCTACGCGATGGCG CTGCCCAACAAGGTCGATCCGTTCCCGAAACTGTCGGCGGCGGTGAAATTGCCACCACGCAAGACGGTCAGCGAGGACGG CATCGCCGGCGACGCCACGCCGCGCCGGCGCTCGCGCGAAGGCCACGCGGCCAGGCGTAGCCGCGAATAG
Upstream 100 bases:
>100_bases AGATCGGACATGATTGGCCTCTGGACCATCAGACAGTCCGCCCAATAGTGAAACGATCCGTTAAACGGTATCGACAATCC CTTCCGAGACACGTGTACGC
Downstream 100 bases:
>100_bases ACGCGACCTTCACAGATCGCCTCAAATCTCAAACTCATTTGCATACGAATGTTTCCGGATCGAACCGATCCGGAAACCGA AACGCTGTTTTCGCGAAATC
Product: electron transfer protein
Products: NA
Alternate protein names: Electron Transfer Protein; Corrinoid Activation/Regeneration Protein; Flavoprotein; Vitamin; Ferredoxin Domain-Containing Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; ATP Synthase F0 A Subunit; Methyltransferase Activation Protein MapA; Activating; Methylamine Methyltransferase Corrinoid Activation Protein
Number of amino acids: Translated: 689; Mature: 689
Protein sequence:
>689_residues MNSPANITDPLVLFMPSGKRGRFPVGTPVLDAARQLGVYVESVCGGRATCGRCQIEVQEGNFAKHKIVSSNDHISPKGPK EERYERVRGLPERRRLSCSAQILGDLVIDVPQDTVINAQTIRKDADTRVIARDTAIRMCYVEIEEPDMHKPLGDLDRLKI ALMKDWGFKNLEFDFYLLPQVQGILRKGNWTATAAIHKDADSDIARVIALWPGLKNEAYGLACDIGSTTIAMHLVSLLSG RVAASSGTSNPQIRFGEDLMSRVSYVMMNPDGREGMTVAVREAISSLVDKVCAEGNVQRNDILDSVFVGNPIMHHLFLGI DPTELGGAPFALAVSGAVRIKASDIGLKLNQGARLYMLPCIAGHVGADAAAVTLSEGPHRQDEMMLIVDVGTNAEIVLGN RARVVAASSPTGPAFEGAEISGGQRAAPGAIERVRIDPDTLEPKYRVIGSELWSDEPGFLDSVQATGVTGICGSGIIEIV AEMYLAGIISEDGVVDGSLAARSPRVTANGRTFSYVLKEGEPKITITQTDVRAIQLAKAALYAGTKLLMEKQNTEHVDRI HFAGAFGSFIDPKYAMVLGLIPDCDLDKVSAVGNAAGAGARMALLNRGYRREIEETVSQIEKIETALEPKFQEHFVYAMA LPNKVDPFPKLSAAVKLPPRKTVSEDGIAGDATPRRRSREGHAARRSRE
Sequences:
>Translated_689_residues MNSPANITDPLVLFMPSGKRGRFPVGTPVLDAARQLGVYVESVCGGRATCGRCQIEVQEGNFAKHKIVSSNDHISPKGPK EERYERVRGLPERRRLSCSAQILGDLVIDVPQDTVINAQTIRKDADTRVIARDTAIRMCYVEIEEPDMHKPLGDLDRLKI ALMKDWGFKNLEFDFYLLPQVQGILRKGNWTATAAIHKDADSDIARVIALWPGLKNEAYGLACDIGSTTIAMHLVSLLSG RVAASSGTSNPQIRFGEDLMSRVSYVMMNPDGREGMTVAVREAISSLVDKVCAEGNVQRNDILDSVFVGNPIMHHLFLGI DPTELGGAPFALAVSGAVRIKASDIGLKLNQGARLYMLPCIAGHVGADAAAVTLSEGPHRQDEMMLIVDVGTNAEIVLGN RARVVAASSPTGPAFEGAEISGGQRAAPGAIERVRIDPDTLEPKYRVIGSELWSDEPGFLDSVQATGVTGICGSGIIEIV AEMYLAGIISEDGVVDGSLAARSPRVTANGRTFSYVLKEGEPKITITQTDVRAIQLAKAALYAGTKLLMEKQNTEHVDRI HFAGAFGSFIDPKYAMVLGLIPDCDLDKVSAVGNAAGAGARMALLNRGYRREIEETVSQIEKIETALEPKFQEHFVYAMA LPNKVDPFPKLSAAVKLPPRKTVSEDGIAGDATPRRRSREGHAARRSRE >Mature_689_residues MNSPANITDPLVLFMPSGKRGRFPVGTPVLDAARQLGVYVESVCGGRATCGRCQIEVQEGNFAKHKIVSSNDHISPKGPK EERYERVRGLPERRRLSCSAQILGDLVIDVPQDTVINAQTIRKDADTRVIARDTAIRMCYVEIEEPDMHKPLGDLDRLKI ALMKDWGFKNLEFDFYLLPQVQGILRKGNWTATAAIHKDADSDIARVIALWPGLKNEAYGLACDIGSTTIAMHLVSLLSG RVAASSGTSNPQIRFGEDLMSRVSYVMMNPDGREGMTVAVREAISSLVDKVCAEGNVQRNDILDSVFVGNPIMHHLFLGI DPTELGGAPFALAVSGAVRIKASDIGLKLNQGARLYMLPCIAGHVGADAAAVTLSEGPHRQDEMMLIVDVGTNAEIVLGN RARVVAASSPTGPAFEGAEISGGQRAAPGAIERVRIDPDTLEPKYRVIGSELWSDEPGFLDSVQATGVTGICGSGIIEIV AEMYLAGIISEDGVVDGSLAARSPRVTANGRTFSYVLKEGEPKITITQTDVRAIQLAKAALYAGTKLLMEKQNTEHVDRI HFAGAFGSFIDPKYAMVLGLIPDCDLDKVSAVGNAAGAGARMALLNRGYRREIEETVSQIEKIETALEPKFQEHFVYAMA LPNKVDPFPKLSAAVKLPPRKTVSEDGIAGDATPRRRSREGHAARRSRE
Specific function: Unknown
COG id: COG3894
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74397; Mature: 74397
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPANITDPLVLFMPSGKRGRFPVGTPVLDAARQLGVYVESVCGGRATCGRCQIEVQEG CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC NFAKHKIVSSNDHISPKGPKEERYERVRGLPERRRLSCSAQILGDLVIDVPQDTVINAQT CCCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCEECHHH IRKDADTRVIARDTAIRMCYVEIEEPDMHKPLGDLDRLKIALMKDWGFKNLEFDFYLLPQ HHCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCHHHEEEEEECCCCCCCCCEEEEECCH VQGILRKGNWTATAAIHKDADSDIARVIALWPGLKNEAYGLACDIGSTTIAMHLVSLLSG HHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCC RVAASSGTSNPQIRFGEDLMSRVSYVMMNPDGREGMTVAVREAISSLVDKVCAEGNVQRN CEEECCCCCCCCEEECHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH DILDSVFVGNPIMHHLFLGIDPTELGGAPFALAVSGAVRIKASDIGLKLNQGARLYMLPC HHHHHHHCCCHHHHHHEECCCHHHCCCCCEEEEECCEEEEEEECCCEEECCCCEEEEEEE IAGHVGADAAAVTLSEGPHRQDEMMLIVDVGTNAEIVLGNRARVVAASSPTGPAFEGAEI HHCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCC SGGQRAAPGAIERVRIDPDTLEPKYRVIGSELWSDEPGFLDSVQATGVTGICGSGIIEIV CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHH AEMYLAGIISEDGVVDGSLAARSPRVTANGRTFSYVLKEGEPKITITQTDVRAIQLAKAA HHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEEEECHHHHHHHHHHH LYAGTKLLMEKQNTEHVDRIHFAGAFGSFIDPKYAMVLGLIPDCDLDKVSAVGNAAGAGA HHHHHHHHHCCCCCCHHHHEEECCHHCCCCCCCHHEEEECCCCCCHHHHHHCCCCCCCCH RMALLNRGYRREIEETVSQIEKIETALEPKFQEHFVYAMALPNKVDPFPKLSAAVKLPPR HHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCCCCCCCCCEEECCCC KTVSEDGIAGDATPRRRSREGHAARRSRE CCCCCCCCCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MNSPANITDPLVLFMPSGKRGRFPVGTPVLDAARQLGVYVESVCGGRATCGRCQIEVQEG CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC NFAKHKIVSSNDHISPKGPKEERYERVRGLPERRRLSCSAQILGDLVIDVPQDTVINAQT CCCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCEECHHH IRKDADTRVIARDTAIRMCYVEIEEPDMHKPLGDLDRLKIALMKDWGFKNLEFDFYLLPQ HHCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCHHHEEEEEECCCCCCCCCEEEEECCH VQGILRKGNWTATAAIHKDADSDIARVIALWPGLKNEAYGLACDIGSTTIAMHLVSLLSG HHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCC RVAASSGTSNPQIRFGEDLMSRVSYVMMNPDGREGMTVAVREAISSLVDKVCAEGNVQRN CEEECCCCCCCCEEECHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH DILDSVFVGNPIMHHLFLGIDPTELGGAPFALAVSGAVRIKASDIGLKLNQGARLYMLPC HHHHHHHCCCHHHHHHEECCCHHHCCCCCEEEEECCEEEEEEECCCEEECCCCEEEEEEE IAGHVGADAAAVTLSEGPHRQDEMMLIVDVGTNAEIVLGNRARVVAASSPTGPAFEGAEI HHCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCC SGGQRAAPGAIERVRIDPDTLEPKYRVIGSELWSDEPGFLDSVQATGVTGICGSGIIEIV CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHH AEMYLAGIISEDGVVDGSLAARSPRVTANGRTFSYVLKEGEPKITITQTDVRAIQLAKAA HHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEEEECHHHHHHHHHHH LYAGTKLLMEKQNTEHVDRIHFAGAFGSFIDPKYAMVLGLIPDCDLDKVSAVGNAAGAGA HHHHHHHHHCCCCCCHHHHEEECCHHCCCCCCCHHEEEECCCCCCHHHHHHCCCCCCCCH RMALLNRGYRREIEETVSQIEKIETALEPKFQEHFVYAMALPNKVDPFPKLSAAVKLPPR HHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCCCCCCCCCEEECCCC KTVSEDGIAGDATPRRRSREGHAARRSRE CCCCCCCCCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA