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The map label for this gene is agmR [H]

Identifier: 13471221

GI number: 13471221

Start: 949774

End: 950457

Strand: Reverse

Name: agmR [H]

Synonym: mll1133

Alternate gene names: 13471221

Gene position: 950457-949774 (Counterclockwise)

Preceding gene: 13471225

Following gene: 13471218

Centisome position: 13.51

GC content: 64.04

Gene sequence:

>684_bases
ATGACAGCACCCAACGATCGCGCCCGGTTCCTGATCATCGACGACCATCCGCTGTTTCGCGAGGCGCTGCACAGCGCCGT
TCAGATGGCCTATCCCGAGGTCGATACGGTCGAGGCGCGCTCGATCGCCGAGGCTCTCGATCTCCTGGCCGACGCCAAGC
CTTTCGACCTTGCGCTGCTCGACCTCTCGATGCCCGACGTGCACGGCTTCGACGGGCTGCTGCAGCTCAGGACCCGCTAT
CCGCGCCTGCCAGTGGTGATCGTTTCGGGCCACGAGGAGCCGCGGATCATTTCCGAGGCCTTGTCCTATGGTGCTGCCGG
CTTCATCCCGAAATCGGCGCGCAAGAGCGATCTCGCCGCCGCCATCCGCTCGGTGATGGACGGCGCCATCTATGTGCCGG
AAACCTATGAAGGCCAGCCGGCCGACGCCGACAGCATCGACCGCGCCGACATGGTCCAGCGGCTGTCCAAGCTGACGCCG
CAGCAGCTGCGTGTGCTGCAAATGCTGCGCCAGGGCCTGCTCAACAAGCAGATCGCCTACGAGCTGCAGGTCGGCGAGAC
CACGGTGAAGGCGCATGTCTCGGAGATATTGCGCAAGCTCAACGTCTACAGCCGCACGCAGGCGGTGATCGAGGTTTCGA
AGCTGGACAATGCAGAGCTGTTTCGCGATCAGGCGGGGTTTTGA

Upstream 100 bases:

>100_bases
CCCACTTTGCAGCGGCCTATCAACTCGCGATAGACTATTTGCTAATAATCCGGCCATGGTCGCGGGGCTATGGTGTGGCC
AATAAACCGGAACGAGCCAC

Downstream 100 bases:

>100_bases
GGGATGAAAAGTGCACCGTCACTGCAATTAGCTCACTTTAGAGTTCCTTCGCACGCAATCTGAACACATGCTCTGGATCA
ATATCTTCGTGTTCAGCCCA

Product: two-component response regulator

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTAPNDRARFLIIDDHPLFREALHSAVQMAYPEVDTVEARSIAEALDLLADAKPFDLALLDLSMPDVHGFDGLLQLRTRY
PRLPVVIVSGHEEPRIISEALSYGAAGFIPKSARKSDLAAAIRSVMDGAIYVPETYEGQPADADSIDRADMVQRLSKLTP
QQLRVLQMLRQGLLNKQIAYELQVGETTVKAHVSEILRKLNVYSRTQAVIEVSKLDNAELFRDQAGF

Sequences:

>Translated_227_residues
MTAPNDRARFLIIDDHPLFREALHSAVQMAYPEVDTVEARSIAEALDLLADAKPFDLALLDLSMPDVHGFDGLLQLRTRY
PRLPVVIVSGHEEPRIISEALSYGAAGFIPKSARKSDLAAAIRSVMDGAIYVPETYEGQPADADSIDRADMVQRLSKLTP
QQLRVLQMLRQGLLNKQIAYELQVGETTVKAHVSEILRKLNVYSRTQAVIEVSKLDNAELFRDQAGF
>Mature_226_residues
TAPNDRARFLIIDDHPLFREALHSAVQMAYPEVDTVEARSIAEALDLLADAKPFDLALLDLSMPDVHGFDGLLQLRTRYP
RLPVVIVSGHEEPRIISEALSYGAAGFIPKSARKSDLAAAIRSVMDGAIYVPETYEGQPADADSIDRADMVQRLSKLTPQ
QLRVLQMLRQGLLNKQIAYELQVGETTVKAHVSEILRKLNVYSRTQAVIEVSKLDNAELFRDQAGF

Specific function: Positive activator for glycerol metabolism [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787473, Length=209, Percent_Identity=34.9282296650718, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788521, Length=202, Percent_Identity=33.1683168316832, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786747, Length=212, Percent_Identity=25.9433962264151, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790102, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789937, Length=202, Percent_Identity=24.2574257425743, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788222, Length=194, Percent_Identity=23.1958762886598, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788712, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25225; Mature: 25094

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPNDRARFLIIDDHPLFREALHSAVQMAYPEVDTVEARSIAEALDLLADAKPFDLALL
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
DLSMPDVHGFDGLLQLRTRYPRLPVVIVSGHEEPRIISEALSYGAAGFIPKSARKSDLAA
ECCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
AIRSVMDGAIYVPETYEGQPADADSIDRADMVQRLSKLTPQQLRVLQMLRQGLLNKQIAY
HHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHE
ELQVGETTVKAHVSEILRKLNVYSRTQAVIEVSKLDNAELFRDQAGF
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
>Mature Secondary Structure 
TAPNDRARFLIIDDHPLFREALHSAVQMAYPEVDTVEARSIAEALDLLADAKPFDLALL
CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
DLSMPDVHGFDGLLQLRTRYPRLPVVIVSGHEEPRIISEALSYGAAGFIPKSARKSDLAA
ECCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
AIRSVMDGAIYVPETYEGQPADADSIDRADMVQRLSKLTPQQLRVLQMLRQGLLNKQIAY
HHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHE
ELQVGETTVKAHVSEILRKLNVYSRTQAVIEVSKLDNAELFRDQAGF
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]