Click here to switch to the map view.

The map label for this gene is ydeK [H]

Identifier: 13471225

GI number: 13471225

Start: 953697

End: 954572

Strand: Reverse

Name: ydeK [H]

Synonym: mll1137

Alternate gene names: 13471225

Gene position: 954572-953697 (Counterclockwise)

Preceding gene: 13471227

Following gene: 13471221

Centisome position: 13.57

GC content: 65.64

Gene sequence:

>876_bases
ATGGAGCCTGGAATGGACAAGACAGCGAGCGGCTGGGTGAACGGATTTATCGGCGTGCTGATTTTCAGCGGCTCACTGCC
GGCGACGCGTGTGGCGGTCATGGATTTCGACCCGACCTTCGTGACATCAGCCCGGGCCGCGATTGCCGGACTGCTTGGAC
TTGCGATGCTGCTGCTGTTCCGGGAAAAACGTCCGGATCGCGGCGATCTGGTGTCGCTGGTGATCGTGGCGCTGGGTGTG
GTCGTCGGCTTTCCCCTGCTGACGGCTTTGGCGCTCAAGCACATCACCTCGGCGCATTCGATCATCTTCATCGGCCTGCT
GCCGCTGGCGACCGCGATCTTCGGTGTGCTGCGCGGCGGCGATCGTCCTCGCCCGGCGTTATGGCTGTTTTCGTGCATCG
GTAGCGCACTCGTCGCCGGTTTCGCGCTGACGCAGGGCGTAACCGCCTCGCCGGTCGGCGATGGCCTGATGCTCGCCGCC
GTCATCGTCTGCGGCCTGGGCTATGCCGAGGGCGCCGCGCTGTCGCGCAGGCTCGGCGGCTGGCAAGTGATCTGCTGGGC
GCTGACCCTGTCGCTGCCGGTCATGCTGGTGCTGAGCTTCGCGACGCTTCCGCCATCCTTTGCCGCCGTCGGCTCCCACG
CCTGGATCGGGCTTGGCTATGTCTCGCTGTTCAGCATGCTGATCGGCTTCGTCTTTTGGTATCGCGGCCTGGCGCAAGGC
GGCATTGCGGCGGTCGGCCAGTTGCAGCTGCTGCAGCCCTTCTTCGGCCTGGCGCTCGCGGCGAGCCTGCTACACGAACA
GGTCAGCCCGCTGATGGTGGTCGTCACGTTGGGCGTGGTGGCCTGCGTGTTCGGTGCGAAGAAGTTTGCGCGGTAG

Upstream 100 bases:

>100_bases
CGGTCATCTGTATTGCTCGATATGCCATTACAGTTTCGTGTAATTGTACCGCATTGTCTCTGGCTGCACCATGGCATCTG
CCCGATAGAGGGCGAAAGCA

Downstream 100 bases:

>100_bases
GATTGGCTGACTCGGCCGCGAACTCATTAATGTGAAATGACAGAACTTAGTGGACGCAGTCACTCCGCGATCAGGTTGGG
CCACGAGTCGGAAAGCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MEPGMDKTASGWVNGFIGVLIFSGSLPATRVAVMDFDPTFVTSARAAIAGLLGLAMLLLFREKRPDRGDLVSLVIVALGV
VVGFPLLTALALKHITSAHSIIFIGLLPLATAIFGVLRGGDRPRPALWLFSCIGSALVAGFALTQGVTASPVGDGLMLAA
VIVCGLGYAEGAALSRRLGGWQVICWALTLSLPVMLVLSFATLPPSFAAVGSHAWIGLGYVSLFSMLIGFVFWYRGLAQG
GIAAVGQLQLLQPFFGLALAASLLHEQVSPLMVVVTLGVVACVFGAKKFAR

Sequences:

>Translated_291_residues
MEPGMDKTASGWVNGFIGVLIFSGSLPATRVAVMDFDPTFVTSARAAIAGLLGLAMLLLFREKRPDRGDLVSLVIVALGV
VVGFPLLTALALKHITSAHSIIFIGLLPLATAIFGVLRGGDRPRPALWLFSCIGSALVAGFALTQGVTASPVGDGLMLAA
VIVCGLGYAEGAALSRRLGGWQVICWALTLSLPVMLVLSFATLPPSFAAVGSHAWIGLGYVSLFSMLIGFVFWYRGLAQG
GIAAVGQLQLLQPFFGLALAASLLHEQVSPLMVVVTLGVVACVFGAKKFAR
>Mature_291_residues
MEPGMDKTASGWVNGFIGVLIFSGSLPATRVAVMDFDPTFVTSARAAIAGLLGLAMLLLFREKRPDRGDLVSLVIVALGV
VVGFPLLTALALKHITSAHSIIFIGLLPLATAIFGVLRGGDRPRPALWLFSCIGSALVAGFALTQGVTASPVGDGLMLAA
VIVCGLGYAEGAALSRRLGGWQVICWALTLSLPVMLVLSFATLPPSFAAVGSHAWIGLGYVSLFSMLIGFVFWYRGLAQG
GIAAVGQLQLLQPFFGLALAASLLHEQVSPLMVVVTLGVVACVFGAKKFAR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30295; Mature: 30295

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPGMDKTASGWVNGFIGVLIFSGSLPATRVAVMDFDPTFVTSARAAIAGLLGLAMLLLF
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
REKRPDRGDLVSLVIVALGVVVGFPLLTALALKHITSAHSIIFIGLLPLATAIFGVLRGG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRPRPALWLFSCIGSALVAGFALTQGVTASPVGDGLMLAAVIVCGLGYAEGAALSRRLGG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
WQVICWALTLSLPVMLVLSFATLPPSFAAVGSHAWIGLGYVSLFSMLIGFVFWYRGLAQG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GIAAVGQLQLLQPFFGLALAASLLHEQVSPLMVVVTLGVVACVFGAKKFAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPGMDKTASGWVNGFIGVLIFSGSLPATRVAVMDFDPTFVTSARAAIAGLLGLAMLLLF
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
REKRPDRGDLVSLVIVALGVVVGFPLLTALALKHITSAHSIIFIGLLPLATAIFGVLRGG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRPRPALWLFSCIGSALVAGFALTQGVTASPVGDGLMLAAVIVCGLGYAEGAALSRRLGG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
WQVICWALTLSLPVMLVLSFATLPPSFAAVGSHAWIGLGYVSLFSMLIGFVFWYRGLAQG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GIAAVGQLQLLQPFFGLALAASLLHEQVSPLMVVVTLGVVACVFGAKKFAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]