Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13470898

Identifier: 13470898

GI number: 13470898

Start: 567429

End: 568865

Strand: Reverse

Name: 13470898

Synonym: mll0717

Alternate gene names: NA

Gene position: 568865-567429 (Counterclockwise)

Preceding gene: 13470899

Following gene: 13470897

Centisome position: 8.08

GC content: 61.59

Gene sequence:

>1437_bases
ATGGCGTCACAGGGGAGTATGCGATTGGCAGCGTTCGATGAAATGCTTCCGGAAGTTTCCGGATTGAGAAGACCGTATTC
GGCTTATGATCGCTGGCTGAAGGAGCAGGATCCAGCCAGACTTACCGAGAAGATGCAGGACGCCGAACGCGTCTTCCGCA
AGACCGGCATCACCTTCGCCGTCTATGGCGAGCAGGAAGCTTCCGAGCGGCTGATCCCCTTCGACATCGTCCCGCGCATC
ATTTCAGGCAATGAGTGGCGGCGCCTGACGCAAGGCATCGAGCAGCGCGTGCAGGCGCTGAACGCCTTCCTCGACGACAT
CTACCATCGCCAGGAGATCCTGCGCGCCGGCCGCGTTCCCAGGGACCTGATCGCCAAGAACGAAGCTTTCCTGCCGGAGA
TGATCGGGGTGCGGCCGCCGGCCGGTGTCTACACCCATATCATCGGCGTCGATATCGTGCGCATCAGCGAGGACGAGTTC
TACGTATTGGAGGACAATGCGCGCACCCCGTCCGGTGTCTCCTACATGCTGGAGAACCGCGAAACGATGATGCAGCTGTT
CCCCGAGCTGTTCCAGAAGATCAAGGTGCGGCCGGTGGAGAACTACCCGCAGCTGCTGCGTCAATCGCTGGCTGCGGTTC
GGCCGCAAAGCACCAAGGGCGCGCCGACCATCGCCGTGCTGACCCCCGGCAGCTTCAATTCCGCCTATTTCGAACACGCC
TTCCTTGCCGACCAGATGGGCGTGCAACTGGTCGAGGGCCAGGATCTGCGCGTTGTCGACGGCCATGTGGCGATGCGCAC
GACCGAAGGCTACAAGCAGATCGACGTGCTCTACCGCCGCGTCGACGATTCCTTCCTCGACCCGCTGACCTTCCGGCCGG
ATTCGGCCCTCGGCATACCCGGCATCATGGATGTCTATCGCGCCGGAAACATCACCATCGCCAATGCGCCGGGAACCGGC
ATCGCCGACGACAAGGCGATCTATTCCTACATGCCCGAGATTGTGGAATTCTACACCGGCCGCAAGGCGATCCTCGGCAA
CATCCCGACCTGGCGCTGTTCGGAGCCGGACAGCCTGAAATATGTGCTCGAGCACATCCATGAACTGGTGATCAAGGAAG
TGCACGGCTCCGGCGGCTACGGCATGCTGGTCGGACCGGCGGCGACCAAGAAAGAGTGCGAAGCCTTCGCCAAGAAACTG
GCGGCGAAGCCTTCGAACTATATCGCCCAACCGACACTGGCGCTGTCGACTTGCCCGATCCTGACCGACAAGGGACTGGC
GCCGCGCCACGTCGACCTCAGGCCCTACGTGCTGGTTTCCGACCGCATCCAGATCGTGCCCGGCGGCCTGACGCGCGTGG
CGTTGAAGGAAGGCTCTCTGGTCGTGAACTCATCGCAGGGTGGCGGAACGAAAGATACTTGGGTGTTGGATGATTGA

Upstream 100 bases:

>100_bases
GTATTTCGACTGCCTCAATTTTAGGCAGCCGCAACATACTGATCGTCCGCATCTCCCAAATCACCGATTGCGCTTGATTT
TCTTCGGCGACGCCAGTGAA

Downstream 100 bases:

>100_bases
GACGAGCAGGGGGACGCAGCAACCATGAGACGTATTCTTCCCTATTCGCCACTCGCTATTCGCTATTCGCCCGACACCGG
AGCAAGCTGACATGCTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFAVYGEQEASERLIPFDIVPRI
ISGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVPRDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEF
YVLEDNARTPSGVSYMLENRETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHA
FLADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIPGIMDVYRAGNITIANAPGTG
IADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLKYVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKL
AAKPSNYIAQPTLALSTCPILTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD

Sequences:

>Translated_478_residues
MASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFAVYGEQEASERLIPFDIVPRI
ISGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVPRDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEF
YVLEDNARTPSGVSYMLENRETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHA
FLADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIPGIMDVYRAGNITIANAPGTG
IADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLKYVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKL
AAKPSNYIAQPTLALSTCPILTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD
>Mature_477_residues
ASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFAVYGEQEASERLIPFDIVPRII
SGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVPRDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEFY
VLEDNARTPSGVSYMLENRETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHAF
LADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIPGIMDVYRAGNITIANAPGTGI
ADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLKYVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKLA
AKPSNYIAQPTLALSTCPILTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 53331; Mature: 53200

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFA
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE
VYGEQEASERLIPFDIVPRIISGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVP
EECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEFYVLEDNARTPSGVSYMLENR
HHHHHCCCCCCHHHHCCCCCCCHHHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHH
ETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHH
FLADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIP
HHHHHHCCEEECCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GIMDVYRAGNITIANAPGTGIADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLK
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHH
YVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKLAAKPSNYIAQPTLALSTCPI
HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEECCC
LTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD
CCCCCCCCCCCCCCCEEEECCCEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
ASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFA
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE
VYGEQEASERLIPFDIVPRIISGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVP
EECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEFYVLEDNARTPSGVSYMLENR
HHHHHCCCCCCHHHHCCCCCCCHHHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHH
ETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHH
FLADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIP
HHHHHHCCEEECCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GIMDVYRAGNITIANAPGTGIADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLK
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHH
YVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKLAAKPSNYIAQPTLALSTCPI
HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEECCC
LTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD
CCCCCCCCCCCCCCCEEEECCCEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]