| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470899
Identifier: 13470899
GI number: 13470899
Start: 569012
End: 569248
Strand: Reverse
Name: 13470899
Synonym: msl0718
Alternate gene names: NA
Gene position: 569248-569012 (Counterclockwise)
Preceding gene: 13470901
Following gene: 13470898
Centisome position: 8.09
GC content: 54.85
Gene sequence:
>237_bases ATGAAGGCGTTTTTCGTGCAGATCAAATGCGAGTTGGGCAAATCCTATGAGGTTGCCAGCGCGCTTGCCGATGCCGAGAT CGCCTCGGAGATCTACTCCACCGCCGGCAATTACGATCTGCTCGCCAAATTCTATGTCGATGACGAGGAAGACGTCGGCC ATTTCGTCAACGAGAAGGTGCAGATTCTCCCCGGCATCAAGGACACGTTTACGGTCGTCACCTTCCGCGCCTTCTAG
Upstream 100 bases:
>100_bases CAGGGGCCACGCCGGCTAAGTGCGGATTCCAGTGCTTGAAAGGCCGCCTCCAGTCTGCCAGAAGGGCCGCTTGGACTTGG ACGTTTAGCGGGACGAAGCC
Downstream 100 bases:
>100_bases CCGGCAAGGCATTTGCCCGGGCACGAGGCAAAGCCTGATCAAGGTCGTATTTCGACTGCCTCAATTTTAGGCAGCCGCAA CATACTGATCGTCCGCATCT
Product: transcription regulator
Products: NA
Alternate protein names: Transcriptional Regulator AsnC Family; Transcriptional Regulator; Conserved Domain Protein; AsnC/Lrp Family Transcriptional Regulator; Transcription Regulator AsnC-Type-Like Protein; Transcriptional Regulator Protein AsnC Family; Transcriptional Regulator Protein; Transcription Regulator; Regulatory Proteins AsnC/Lrp; Transcriptional Regulator Lrp Family; Transcriptional Regulator AsnC Family Protein; Lpr Family Transcriptional Regulator; Regulatory Protein AsnC/Lrp
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MKAFFVQIKCELGKSYEVASALADAEIASEIYSTAGNYDLLAKFYVDDEEDVGHFVNEKVQILPGIKDTFTVVTFRAF
Sequences:
>Translated_78_residues MKAFFVQIKCELGKSYEVASALADAEIASEIYSTAGNYDLLAKFYVDDEEDVGHFVNEKVQILPGIKDTFTVVTFRAF >Mature_78_residues MKAFFVQIKCELGKSYEVASALADAEIASEIYSTAGNYDLLAKFYVDDEEDVGHFVNEKVQILPGIKDTFTVVTFRAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8719; Mature: 8719
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFFVQIKCELGKSYEVASALADAEIASEIYSTAGNYDLLAKFYVDDEEDVGHFVNEKV CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCE QILPGIKDTFTVVTFRAF EECCCCCCCEEEEEEEEC >Mature Secondary Structure MKAFFVQIKCELGKSYEVASALADAEIASEIYSTAGNYDLLAKFYVDDEEDVGHFVNEKV CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCE QILPGIKDTFTVVTFRAF EECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA