| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470870
Identifier: 13470870
GI number: 13470870
Start: 533786
End: 534334
Strand: Reverse
Name: 13470870
Synonym: mll0683
Alternate gene names: NA
Gene position: 534334-533786 (Counterclockwise)
Preceding gene: 13470871
Following gene: 13470867
Centisome position: 7.59
GC content: 65.94
Gene sequence:
>549_bases ATGCGACACGTACTGACCTCCTTTCTGTCTGTGCACTGGGCGATTGTCTTCGCCCTGCTGGCGCTGATCTGCATCGATGG AGACCGCGGTGTGACGGCTGCCCTCGGCGTGCTCGGAGTGACCGTCGAGAGCGCCCGGTTCGTCGATCTGCAGAACGTCG TCGTGGTCGCGCCGCTGGCGATCGCCTTGCTGGTCGTGGCCGTGCTGTTCTTCTGGGCCTTTGTCGATACGCTGATCAAC GATGCGGCCAGCCCAGGCGCCGACAGCGTCGTTCGCATCGCCTTCATTTCCGCGTCCGGCGTCCTGTCGATGATCCTGAT CGGTGGCGCCGCGCAAGGCATCAACGGGCTGTTCATGGTCGTTGCGGTGCAATTGGCGGCGCTTCTGGCCTCCTATGTCG CGATGCTCGCCGAGCGGCGCTCCGCGGCCGCGTCGGATGACGCCGATTTTCGCGCCACGGCGCACAGCATGGCGAAGGCG GCGGCCCATAATTCGCTGCTTTCCCTGATATCGGGCCGGGCCGGGCCGAACGGGAGGGGAGGCCGCTGA
Upstream 100 bases:
>100_bases TGGGTGCGTCCTGTGGATCGCCGTTAACCTTAACAAATGGTTTCCATTGCGGCGGCGGGCGGCAAAGCCCACTGTCATTC CTGCCGAAGCAGGAACCACG
Downstream 100 bases:
>100_bases TGCGCTATATCTTCGCATTGTGGGCGGCCCCGATGGCGCTGTTCTGGGGCTGGTTCTACCTGTCGCTCAACGACATGAAT TTCGGCTATGTGATGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRHVLTSFLSVHWAIVFALLALICIDGDRGVTAALGVLGVTVESARFVDLQNVVVVAPLAIALLVVAVLFFWAFVDTLIN DAASPGADSVVRIAFISASGVLSMILIGGAAQGINGLFMVVAVQLAALLASYVAMLAERRSAAASDDADFRATAHSMAKA AAHNSLLSLISGRAGPNGRGGR
Sequences:
>Translated_182_residues MRHVLTSFLSVHWAIVFALLALICIDGDRGVTAALGVLGVTVESARFVDLQNVVVVAPLAIALLVVAVLFFWAFVDTLIN DAASPGADSVVRIAFISASGVLSMILIGGAAQGINGLFMVVAVQLAALLASYVAMLAERRSAAASDDADFRATAHSMAKA AAHNSLLSLISGRAGPNGRGGR >Mature_182_residues MRHVLTSFLSVHWAIVFALLALICIDGDRGVTAALGVLGVTVESARFVDLQNVVVVAPLAIALLVVAVLFFWAFVDTLIN DAASPGADSVVRIAFISASGVLSMILIGGAAQGINGLFMVVAVQLAALLASYVAMLAERRSAAASDDADFRATAHSMAKA AAHNSLLSLISGRAGPNGRGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18699; Mature: 18699
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVLTSFLSVHWAIVFALLALICIDGDRGVTAALGVLGVTVESARFVDLQNVVVVAPLA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALLVVAVLFFWAFVDTLINDAASPGADSVVRIAFISASGVLSMILIGGAAQGINGLFMV HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH VAVQLAALLASYVAMLAERRSAAASDDADFRATAHSMAKAAAHNSLLSLISGRAGPNGRG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GR CC >Mature Secondary Structure MRHVLTSFLSVHWAIVFALLALICIDGDRGVTAALGVLGVTVESARFVDLQNVVVVAPLA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALLVVAVLFFWAFVDTLINDAASPGADSVVRIAFISASGVLSMILIGGAAQGINGLFMV HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH VAVQLAALLASYVAMLAERRSAAASDDADFRATAHSMAKAAAHNSLLSLISGRAGPNGRG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA