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The map label for this gene is dppC [H]

Identifier: 13470801

GI number: 13470801

Start: 464204

End: 465220

Strand: Reverse

Name: dppC [H]

Synonym: mll0598

Alternate gene names: 13470801

Gene position: 465220-464204 (Counterclockwise)

Preceding gene: 13470802

Following gene: 13470800

Centisome position: 6.61

GC content: 65.0

Gene sequence:

>1017_bases
GTGTCGAACCAAGCCGTCGCCATGTCGCGCAAGACGCGAGGGCCCTGGGCCGTCGCGTTCGCGAAGCTGGCAAGGGACAG
GGCTGCCATGGCATCCTTGGCCGTGTTCCTCCTCATCGTGCTGGCCTGCCTCAGCGCGCCTCTCTACGCGAAATGGGCAG
GCACGGACCCATTCGCTTCGACGCTCGACGCCGTCATCCAGATCGACGGCGCCGACGTCCCGGTGATGGAACAGTCGACC
GAAGGGCTCGGGCTTGGCTACACGCCGCTGGGGCCGACCTGGCGGCTCGGTAATTATTTCCTTGGCGCCGACAGCCAGGG
GCGCGATGTCATGGCCCGAATGCTCTATGGCGGGCTGAGCTCGCTGCTGATCTCCGGGGCGGCCACCATCTTCACCCTGA
TTATCGGCACGGCGGCGGGATTGATCGCAGGCTATTTCGGCGGCATCACCGATACGGTGCTGTCGCGCCTGCTGGATGTG
CTGTGGGCGTTCCCGATCTATCTGCTGGCGATTTCGCTTTCCATCGTCACCATCGCGCAAGGCATCAGGATCGGGCCGAT
CGATATCGAGTCCGGCAGCCTATGGTTGCCAGTCATCATCATCGGCATCGTCTATGTGCCCTATGTGGCGCGCCCGATAC
GCGGGCAGGTGCTGTCGCTGCGCCACAGCGAATTCGTGCTGGCCGCAATCAATCTCGGCGTGCCGGGATGGCGCATCCTG
TGGCGCGATATCCTGCCCAACATCACCACCACGCTCATCGTCTTCGTGCCGCTGATGATGGCGCTGAACATGCTGACGGA
ATCGGCACTTTCCTTTCTGTCGATCGGCGTGCAGCCGCCCGCCGCGAGCTGGGGCACCATCATCCAGGACGGGCAGGCGC
TGCTCTACACCAGGCCGCTGGTGGCGCTGGTGCCAGGCCTGGCGATCGCAGTGTCCGTCATGGCGCTCAATGTCTTCGGC
GACGGGCTGCGCGACGCGCTCGACCCGCGCTCCAAGGTTCGGCTGGGGCGCGACTGA

Upstream 100 bases:

>100_bases
TTCGTCAGCAAACGGGTTGGCAACTTCAAGTTCAACCGGCAGTTCAACTGGATGATCACCCAGTCCTGGGTGCAGTAACG
ACCTTTGGAGGGGCACGCCC

Downstream 100 bases:

>100_bases
TGTTTTATGCCATCCTGCGCCGTTTCGGTCAGATGCTGTTCGTGATGTTCGGCATCTCGGTCATCGTCTTCCTGATCTTC
TTCGCGACGCCGGGCGCTGA

Product: permease of oligopeptide ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSNQAVAMSRKTRGPWAVAFAKLARDRAAMASLAVFLLIVLACLSAPLYAKWAGTDPFASTLDAVIQIDGADVPVMEQST
EGLGLGYTPLGPTWRLGNYFLGADSQGRDVMARMLYGGLSSLLISGAATIFTLIIGTAAGLIAGYFGGITDTVLSRLLDV
LWAFPIYLLAISLSIVTIAQGIRIGPIDIESGSLWLPVIIIGIVYVPYVARPIRGQVLSLRHSEFVLAAINLGVPGWRIL
WRDILPNITTTLIVFVPLMMALNMLTESALSFLSIGVQPPAASWGTIIQDGQALLYTRPLVALVPGLAIAVSVMALNVFG
DGLRDALDPRSKVRLGRD

Sequences:

>Translated_338_residues
MSNQAVAMSRKTRGPWAVAFAKLARDRAAMASLAVFLLIVLACLSAPLYAKWAGTDPFASTLDAVIQIDGADVPVMEQST
EGLGLGYTPLGPTWRLGNYFLGADSQGRDVMARMLYGGLSSLLISGAATIFTLIIGTAAGLIAGYFGGITDTVLSRLLDV
LWAFPIYLLAISLSIVTIAQGIRIGPIDIESGSLWLPVIIIGIVYVPYVARPIRGQVLSLRHSEFVLAAINLGVPGWRIL
WRDILPNITTTLIVFVPLMMALNMLTESALSFLSIGVQPPAASWGTIIQDGQALLYTRPLVALVPGLAIAVSVMALNVFG
DGLRDALDPRSKVRLGRD
>Mature_337_residues
SNQAVAMSRKTRGPWAVAFAKLARDRAAMASLAVFLLIVLACLSAPLYAKWAGTDPFASTLDAVIQIDGADVPVMEQSTE
GLGLGYTPLGPTWRLGNYFLGADSQGRDVMARMLYGGLSSLLISGAATIFTLIIGTAAGLIAGYFGGITDTVLSRLLDVL
WAFPIYLLAISLSIVTIAQGIRIGPIDIESGSLWLPVIIIGIVYVPYVARPIRGQVLSLRHSEFVLAAINLGVPGWRILW
RDILPNITTTLIVFVPLMMALNMLTESALSFLSIGVQPPAASWGTIIQDGQALLYTRPLVALVPGLAIAVSVMALNVFGD
GLRDALDPRSKVRLGRD

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=323, Percent_Identity=34.0557275541796, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1787498, Length=332, Percent_Identity=33.433734939759, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789964, Length=244, Percent_Identity=36.8852459016393, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1787549, Length=250, Percent_Identity=35.6, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787760, Length=233, Percent_Identity=30.9012875536481, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789889, Length=233, Percent_Identity=32.618025751073, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1788505, Length=234, Percent_Identity=29.4871794871795, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36019; Mature: 35888

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQAVAMSRKTRGPWAVAFAKLARDRAAMASLAVFLLIVLACLSAPLYAKWAGTDPFAS
CCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH
TLDAVIQIDGADVPVMEQSTEGLGLGYTPLGPTWRLGNYFLGADSQGRDVMARMLYGGLS
HHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH
SLLISGAATIFTLIIGTAAGLIAGYFGGITDTVLSRLLDVLWAFPIYLLAISLSIVTIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIRIGPIDIESGSLWLPVIIIGIVYVPYVARPIRGQVLSLRHSEFVLAAINLGVPGWRIL
CCEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCHHHHH
WRDILPNITTTLIVFVPLMMALNMLTESALSFLSIGVQPPAASWGTIIQDGQALLYTRPL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHCCH
VALVPGLAIAVSVMALNVFGDGLRDALDPRSKVRLGRD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
>Mature Secondary Structure 
SNQAVAMSRKTRGPWAVAFAKLARDRAAMASLAVFLLIVLACLSAPLYAKWAGTDPFAS
CCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH
TLDAVIQIDGADVPVMEQSTEGLGLGYTPLGPTWRLGNYFLGADSQGRDVMARMLYGGLS
HHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH
SLLISGAATIFTLIIGTAAGLIAGYFGGITDTVLSRLLDVLWAFPIYLLAISLSIVTIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIRIGPIDIESGSLWLPVIIIGIVYVPYVARPIRGQVLSLRHSEFVLAAINLGVPGWRIL
CCEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCHHHHH
WRDILPNITTTLIVFVPLMMALNMLTESALSFLSIGVQPPAASWGTIIQDGQALLYTRPL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHCCH
VALVPGLAIAVSVMALNVFGDGLRDALDPRSKVRLGRD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]