| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is gsiB [H]
Identifier: 13470802
GI number: 13470802
Start: 465243
End: 466904
Strand: Reverse
Name: gsiB [H]
Synonym: mll0599
Alternate gene names: 13470802
Gene position: 466904-465243 (Counterclockwise)
Preceding gene: 13470803
Following gene: 13470801
Centisome position: 6.64
GC content: 61.43
Gene sequence:
>1662_bases ATGAAGAAACTGCTTTTGGCAGCATCCGCCGCGGCACTGCTGGCCGGCACGTGGCTCGCTCCGGCACAGGCTGAGTATCT CAAGGAGCACCGAGGCGGCACCATCCGCCTTCTGGCCCGCTCTGCGGCGGGAACGCTCGATCCGCACATCAACTACACCG ATCAGGGCTGGCAGATGTACCAGCCGATCTATGACGGCCTGGTGGCCTTCCGCAAGGCCGAGGGCATGGACGGCTTCACC ATCGTCCCCGATCTGGCCGAGGCGCTGCCGCAGGTCAGCAATGACGGCAAGACCTTCACGTTCAAGCTGCGCAAGGGCAT CAAGTTCTCCAGTGGCCAGGATATGGGCGTGAAGGACGTCGTCGCCTCCTTCCAGCGCATCTTCAAGGTTTCCGGGCCGA CTTCCGGCACCTTCTATGCCGGCATCGTCGGCGCCGACAAATGCCTGGCCGACACCAAGAACTGCACGCTCGAAGGCGGC GTTGTCGGCGACGAGGCGGCCGGCACCATCACGCTCAATCTCACCAAGCCCGACGCCGAGATCCTCTACAAGCTTGCCTT GCCGCACGCCGTGGTACTGCCGGCGGATACGCCCGCCGAAGACATGGGCTCCAAGCCCATTCCCAGCACCGGTGCCTACA TGATCTCCGCCTTCGACCCCAACAAGGGCATGACGGTGTCGCGCAACCCGAACTTCAAGCAGTGGAGCGAGGAAGCGCAG CCGGACGGCTATCCGGATGTCGTCCAGTATGATTTCGGCCTGTCCGAGGAAGCGGCCGTGACGGCGATCCAGAACGGCGA AGCGGACTGGATGTTCGATGCGCTGCCGAGCGACCGCCTGGGCGAACTTGGCAGCAAGTCGATGGACCAGTTGCACATCT CGCCGCTTTCGGCGTGGTGGTATGCGCCGCTGAACAACCGTCTGGCACCCTTCGACAACGAAAAGGCGCGCCAGGCCGTT GCCTATGCGATCGATCGCAACACGCTGGTCAAGCTGTTCGGCGGCAAGGTGCTGGCCTCGCCGGTCTGCCAGGTCCTGCC GCCGGACTTCCCGGGCCATGAGGACTATTGCCCGTTCACCAAAAACCCCGGCGCCAAATGGTCGGCACCCGATCTCGACA AGGCAAAGCAGCTTGTCGAGGAATCCGGCACCAAGGGCCAGAAGGTGACCATCATCGCCGAGGACACAGCCATCTCACGC TCCATCGGCGTCTATCTGCAGAGCGTGCTGACCAGCATCGGCTATGTCGCCGACGTCAAGCCGATCTCGCCCAATATCCA GTTCACCTACATTCAGAACACCAACAACAAAGTGCAGATGTCCATTACCCAGTGGTACAAGGACTATCCCGCAGCGTCGG ACTTCCTCAACATCCTGTTCAGCTGCTCCTCCTTCCGTGAAGGTTCGGACGCTTCGATCAACATCGCCGGCTTCTGCGAC AAGGACATCGACGCCAAGATGCAAAAGGCGCTGGACCTCGGCGTGACCGACCAGAAAGCCGCCGACAAAATGTGGGCCGA AATCGACAAGCAGGTCACGGACAAGGCGCCGGCAGTCGGCCTCTTTACCCCGAAGCGGCTTGATTTCGTCAGCAAACGGG TTGGCAACTTCAAGTTCAACCGGCAGTTCAACTGGATGATCACCCAGTCCTGGGTGCAGTAA
Upstream 100 bases:
>100_bases TTCCAGCCACATGCCGCATGTCGAAGAGCAGGACGCGTGCATGCGGGTGGTGGGCGACTTTCTGGACGACAACGACAACT GAGAAAAGGGGAACCAAGAC
Downstream 100 bases:
>100_bases CGACCTTTGGAGGGGCACGCCCGTGTCGAACCAAGCCGTCGCCATGTCGCGCAAGACGCGAGGGCCCTGGGCCGTCGCGT TCGCGAAGCTGGCAAGGGAC
Product: hypothetical protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKKLLLAASAAALLAGTWLAPAQAEYLKEHRGGTIRLLARSAAGTLDPHINYTDQGWQMYQPIYDGLVAFRKAEGMDGFT IVPDLAEALPQVSNDGKTFTFKLRKGIKFSSGQDMGVKDVVASFQRIFKVSGPTSGTFYAGIVGADKCLADTKNCTLEGG VVGDEAAGTITLNLTKPDAEILYKLALPHAVVLPADTPAEDMGSKPIPSTGAYMISAFDPNKGMTVSRNPNFKQWSEEAQ PDGYPDVVQYDFGLSEEAAVTAIQNGEADWMFDALPSDRLGELGSKSMDQLHISPLSAWWYAPLNNRLAPFDNEKARQAV AYAIDRNTLVKLFGGKVLASPVCQVLPPDFPGHEDYCPFTKNPGAKWSAPDLDKAKQLVEESGTKGQKVTIIAEDTAISR SIGVYLQSVLTSIGYVADVKPISPNIQFTYIQNTNNKVQMSITQWYKDYPAASDFLNILFSCSSFREGSDASINIAGFCD KDIDAKMQKALDLGVTDQKAADKMWAEIDKQVTDKAPAVGLFTPKRLDFVSKRVGNFKFNRQFNWMITQSWVQ
Sequences:
>Translated_553_residues MKKLLLAASAAALLAGTWLAPAQAEYLKEHRGGTIRLLARSAAGTLDPHINYTDQGWQMYQPIYDGLVAFRKAEGMDGFT IVPDLAEALPQVSNDGKTFTFKLRKGIKFSSGQDMGVKDVVASFQRIFKVSGPTSGTFYAGIVGADKCLADTKNCTLEGG VVGDEAAGTITLNLTKPDAEILYKLALPHAVVLPADTPAEDMGSKPIPSTGAYMISAFDPNKGMTVSRNPNFKQWSEEAQ PDGYPDVVQYDFGLSEEAAVTAIQNGEADWMFDALPSDRLGELGSKSMDQLHISPLSAWWYAPLNNRLAPFDNEKARQAV AYAIDRNTLVKLFGGKVLASPVCQVLPPDFPGHEDYCPFTKNPGAKWSAPDLDKAKQLVEESGTKGQKVTIIAEDTAISR SIGVYLQSVLTSIGYVADVKPISPNIQFTYIQNTNNKVQMSITQWYKDYPAASDFLNILFSCSSFREGSDASINIAGFCD KDIDAKMQKALDLGVTDQKAADKMWAEIDKQVTDKAPAVGLFTPKRLDFVSKRVGNFKFNRQFNWMITQSWVQ >Mature_553_residues MKKLLLAASAAALLAGTWLAPAQAEYLKEHRGGTIRLLARSAAGTLDPHINYTDQGWQMYQPIYDGLVAFRKAEGMDGFT IVPDLAEALPQVSNDGKTFTFKLRKGIKFSSGQDMGVKDVVASFQRIFKVSGPTSGTFYAGIVGADKCLADTKNCTLEGG VVGDEAAGTITLNLTKPDAEILYKLALPHAVVLPADTPAEDMGSKPIPSTGAYMISAFDPNKGMTVSRNPNFKQWSEEAQ PDGYPDVVQYDFGLSEEAAVTAIQNGEADWMFDALPSDRLGELGSKSMDQLHISPLSAWWYAPLNNRLAPFDNEKARQAV AYAIDRNTLVKLFGGKVLASPVCQVLPPDFPGHEDYCPFTKNPGAKWSAPDLDKAKQLVEESGTKGQKVTIIAEDTAISR SIGVYLQSVLTSIGYVADVKPISPNIQFTYIQNTNNKVQMSITQWYKDYPAASDFLNILFSCSSFREGSDASINIAGFCD KDIDAKMQKALDLGVTDQKAADKMWAEIDKQVTDKAPAVGLFTPKRLDFVSKRVGNFKFNRQFNWMITQSWVQ
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787495, Length=569, Percent_Identity=23.9015817223199, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1787052, Length=506, Percent_Identity=24.703557312253, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789966, Length=512, Percent_Identity=25, Blast_Score=93, Evalue=6e-20, Organism=Escherichia coli, GI1789397, Length=547, Percent_Identity=23.0347349177331, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1787762, Length=509, Percent_Identity=24.1650294695481, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1787551, Length=433, Percent_Identity=23.5565819861432, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 60430; Mature: 60430
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS01040 SBP_BACTERIAL_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLAASAAALLAGTWLAPAQAEYLKEHRGGTIRLLARSAAGTLDPHINYTDQGWQMY CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHH QPIYDGLVAFRKAEGMDGFTIVPDLAEALPQVSNDGKTFTFKLRKGIKFSSGQDMGVKDV HHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCHHHH VASFQRIFKVSGPTSGTFYAGIVGADKCLADTKNCTLEGGVVGDEAAGTITLNLTKPDAE HHHHHHHHCCCCCCCCCEEEEEECCHHHHCCCCCCEEECCEECCCCCCEEEEEEECCHHH ILYKLALPHAVVLPADTPAEDMGSKPIPSTGAYMISAFDPNKGMTVSRNPNFKQWSEEAQ HHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHCC PDGYPDVVQYDFGLSEEAAVTAIQNGEADWMFDALPSDRLGELGSKSMDQLHISPLSAWW CCCCCCCEEECCCCCCCHHEEEEECCCCCEEEECCCCHHHHHHCCCCHHHEECCEEEEEE YAPLNNRLAPFDNEKARQAVAYAIDRNTLVKLFGGKVLASPVCQVLPPDFPGHEDYCPFT ECCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHCCHHHHCCHHHHCCCCCCCCCCCCCCC KNPGAKWSAPDLDKAKQLVEESGTKGQKVTIIAEDTAISRSIGVYLQSVLTSIGYVADVK CCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEECC PISPNIQFTYIQNTNNKVQMSITQWYKDYPAASDFLNILFSCSSFREGSDASINIAGFCD CCCCCEEEEEEECCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCC KDIDAKMQKALDLGVTDQKAADKMWAEIDKQVTDKAPAVGLFTPKRLDFVSKRVGNFKFN CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCEEEC RQFNWMITQSWVQ CEEEEEEEHHHCC >Mature Secondary Structure MKKLLLAASAAALLAGTWLAPAQAEYLKEHRGGTIRLLARSAAGTLDPHINYTDQGWQMY CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHH QPIYDGLVAFRKAEGMDGFTIVPDLAEALPQVSNDGKTFTFKLRKGIKFSSGQDMGVKDV HHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCHHHH VASFQRIFKVSGPTSGTFYAGIVGADKCLADTKNCTLEGGVVGDEAAGTITLNLTKPDAE HHHHHHHHCCCCCCCCCEEEEEECCHHHHCCCCCCEEECCEECCCCCCEEEEEEECCHHH ILYKLALPHAVVLPADTPAEDMGSKPIPSTGAYMISAFDPNKGMTVSRNPNFKQWSEEAQ HHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHCC PDGYPDVVQYDFGLSEEAAVTAIQNGEADWMFDALPSDRLGELGSKSMDQLHISPLSAWW CCCCCCCEEECCCCCCCHHEEEEECCCCCEEEECCCCHHHHHHCCCCHHHEECCEEEEEE YAPLNNRLAPFDNEKARQAVAYAIDRNTLVKLFGGKVLASPVCQVLPPDFPGHEDYCPFT ECCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHCCHHHHCCHHHHCCCCCCCCCCCCCCC KNPGAKWSAPDLDKAKQLVEESGTKGQKVTIIAEDTAISRSIGVYLQSVLTSIGYVADVK CCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEECC PISPNIQFTYIQNTNNKVQMSITQWYKDYPAASDFLNILFSCSSFREGSDASINIAGFCD CCCCCEEEEEEECCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCC KDIDAKMQKALDLGVTDQKAADKMWAEIDKQVTDKAPAVGLFTPKRLDFVSKRVGNFKFN CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCEEEC RQFNWMITQSWVQ CEEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA