| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470748
Identifier: 13470748
GI number: 13470748
Start: 396903
End: 397649
Strand: Reverse
Name: 13470748
Synonym: mll0537
Alternate gene names: NA
Gene position: 397649-396903 (Counterclockwise)
Preceding gene: 13470750
Following gene: 13470745
Centisome position: 5.65
GC content: 68.54
Gene sequence:
>747_bases ATGACCGAGGCGCGCCATCATCGGCTGAAGACGGCAACCGGCTGCGTCATGGTGCACGAATTCCGGCCGGAGCCGGGCAG GGCGGCGCTCGGCACCGTGCTTGTCGTTCATGGCTGGCGTTCGCGTACCGAATATATGCGCGCCTTGATCGAGGGCTACC GCGCGGCCGGCTACAGGGTCGTTTCCCTGGACCTGCCGGGGCATGGCCATTCGCAGGGCCGACACCTGAACATGGCGAAT GCGGTCGACGCAGTGCGGGTCGCCGGCGAATGGTTCGGCCCGTTCGTCGCGGCGGTGGGGCATTCCTTCGGTGGCGCCGT CGCCGCCAATGCGATCGCCGGTTCCATCAAGAACATTCCGCCGCTGGCGGCCGGACGTCTCGTGCTGATCGCAGCACCGA GCTCCTTGCCGGTGATCTTCGCCGACTTCAGCCGCATGCTCAATGTCGGGCCGCGCTCGCAGGTGGCGATGGCGGACTGC GTCCAGCACCTGTCCGGCCGGCCGCTGCATGAATTCACTGGCGACCGCCAGCTTGCCCAGGCGCCCGTGCCGACGCTGGT CATCCACGCGCAGGACGATCGCGAGGTGCCGGCCGAGCATGCAAAGCGCTATGCCGGCGCCGGCGGTCATGTGCGGCTGC ATTGGGCCGACGGTCTCGGCCACCGCCGCATTCTTGCGGACAAGGGCGTGGTCGAACGCGCAGTCGCCTTCGTCGCGGAA CACCGCGAGCCGTCGCGGCTGCATTGA
Upstream 100 bases:
>100_bases CATCACCGGGCGCGCGGCTTTCGAACTGTTCTGCCGCACGCCGAGCGCCAGGGCGCTGACCGACGGCGAGCGCCGCGCCA TCGGCCGGGCCGCGGAGTTC
Downstream 100 bases:
>100_bases GCCGCTGTCCTCGTGCTAAGCATGCCGTTGTCTCAAAACCGCGACCACTTTTGAGCGACATGCATTGGGTTATTTCTTCT TCTCGCCGGGCTCGACAGGC
Product: hydrolase
Products: NA
Alternate protein names: Hydrolase Protein; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Fold Protein; Lysophospholipase
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTEARHHRLKTATGCVMVHEFRPEPGRAALGTVLVVHGWRSRTEYMRALIEGYRAAGYRVVSLDLPGHGHSQGRHLNMAN AVDAVRVAGEWFGPFVAAVGHSFGGAVAANAIAGSIKNIPPLAAGRLVLIAAPSSLPVIFADFSRMLNVGPRSQVAMADC VQHLSGRPLHEFTGDRQLAQAPVPTLVIHAQDDREVPAEHAKRYAGAGGHVRLHWADGLGHRRILADKGVVERAVAFVAE HREPSRLH
Sequences:
>Translated_248_residues MTEARHHRLKTATGCVMVHEFRPEPGRAALGTVLVVHGWRSRTEYMRALIEGYRAAGYRVVSLDLPGHGHSQGRHLNMAN AVDAVRVAGEWFGPFVAAVGHSFGGAVAANAIAGSIKNIPPLAAGRLVLIAAPSSLPVIFADFSRMLNVGPRSQVAMADC VQHLSGRPLHEFTGDRQLAQAPVPTLVIHAQDDREVPAEHAKRYAGAGGHVRLHWADGLGHRRILADKGVVERAVAFVAE HREPSRLH >Mature_247_residues TEARHHRLKTATGCVMVHEFRPEPGRAALGTVLVVHGWRSRTEYMRALIEGYRAAGYRVVSLDLPGHGHSQGRHLNMANA VDAVRVAGEWFGPFVAAVGHSFGGAVAANAIAGSIKNIPPLAAGRLVLIAAPSSLPVIFADFSRMLNVGPRSQVAMADCV QHLSGRPLHEFTGDRQLAQAPVPTLVIHAQDDREVPAEHAKRYAGAGGHVRLHWADGLGHRRILADKGVVERAVAFVAEH REPSRLH
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26745; Mature: 26614
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEARHHRLKTATGCVMVHEFRPEPGRAALGTVLVVHGWRSRTEYMRALIEGYRAAGYRV CCCCHHHHHHHHCCEEEEEECCCCCCCHHHCEEEEEECCHHHHHHHHHHHHHHHHCCEEE VSLDLPGHGHSQGRHLNMANAVDAVRVAGEWFGPFVAAVGHSFGGAVAANAIAGSIKNIP EEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC PLAAGRLVLIAAPSSLPVIFADFSRMLNVGPRSQVAMADCVQHLSGRPLHEFTGDRQLAQ CCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCCHHHH APVPTLVIHAQDDREVPAEHAKRYAGAGGHVRLHWADGLGHRRILADKGVVERAVAFVAE CCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHH HREPSRLH CCCCCCCC >Mature Secondary Structure TEARHHRLKTATGCVMVHEFRPEPGRAALGTVLVVHGWRSRTEYMRALIEGYRAAGYRV CCCHHHHHHHHCCEEEEEECCCCCCCHHHCEEEEEECCHHHHHHHHHHHHHHHHCCEEE VSLDLPGHGHSQGRHLNMANAVDAVRVAGEWFGPFVAAVGHSFGGAVAANAIAGSIKNIP EEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC PLAAGRLVLIAAPSSLPVIFADFSRMLNVGPRSQVAMADCVQHLSGRPLHEFTGDRQLAQ CCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCCHHHH APVPTLVIHAQDDREVPAEHAKRYAGAGGHVRLHWADGLGHRRILADKGVVERAVAFVAE CCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCEEECCCHHHHHHHHHHHH HREPSRLH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA