| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470677
Identifier: 13470677
GI number: 13470677
Start: 327678
End: 329264
Strand: Reverse
Name: 13470677
Synonym: mll0452
Alternate gene names: NA
Gene position: 329264-327678 (Counterclockwise)
Preceding gene: 13470678
Following gene: 13470676
Centisome position: 4.68
GC content: 62.07
Gene sequence:
>1587_bases ATGAGGGCCGGTTTCCGCCGCGTACCGGTGCAGGCGCAAGCCCAGCAACGGCATAGCACGATGACATTCCCCGCGCCGAC GCGCGGCAAGATTTCCAATGAGAACCTTGCCGCCGCCGGGCCAAAGGGTGCCAAGGTGCTGGAGAACTGGTTCCCGACCA GCACCGGTATCCGCTTGCGCGGCGGTGCGGCGAGGCATGCGACGATAGGGACAATCCCTGTCGTCAGCATGATGTCGTAC GACGGGCCGGCCGGCAGCTTCATGTTCGCTGCCGACGGCACCAATATTTTCGATGTCACGACGCCGGCCAGCCCAACCGT TCCACCGACGGCGGTCGTTACCAGCCTCACCAGTGGCTATTTTTCCTATGTGCAGATGCCGACGCCGGGCGGTTATTACC TCTCAGCGCTCAACGGCACGGACAGCATGCGCCAGTTCGATGGCACGACGTGGACGACGGTTGCCGCGCTCGGGCCTTCG ATCAACACCAACCAGCTGTCCTTCATCTGGACCTATCGAAACCGGCAGTTCTTCGTTCAGAAAAACACCCTGAATGTCTG GTTTCTGCCTGTCGACAGCATTTCGGGCACTGCCCAGGCCTATTCATTGGCCGGCGTCTTCCAGGACGGCGGATCAGTGC TGTGTGGTGGAACCTGGTCGCTTGAGACTGGCGGTGGCATCGACGCCAAATGCGTGATCATCTCCGATCGCGGCGAGGTT GCTGTTTTCCAGGGGACCAACCCCGCCGATGCAACGGCATGGTCGCTCGTCGGTCGCTATGCCATGTCACCGCTGCTTGG TCCGCGCGCCCTGATGCAGGCCGGTGGTGATCTGTTGATGGGCATGGCCGACGGCATTGTCCCGATCTCGCAGGCGATCC AGAAGGACGCTGCGGCACTTGCGCTGATCAGCGTGACGCGGGCCATCGAGCCAGATTGGCGCAAGGAAGTCGCCGCGCGC ACCGTCCTGCCATGGGAGCTGCTGAAATGGCCGCAATTCAACATGGGCATCGTGGCGCTGCCTGCCAGCCCGGGACAGGA CAGAAAGGTCTTCGTCGTCAACCTGCAAACCGGGGCATGGGCGGATTACACCGGCTGGGATGCGTGTTGCCTGGTCCTGC ACGCTGGCTGGGCCTATTTCGGCACCTCGGATGGCAAGATCATGCAATGCGAGGTAGGCGGCATCGACGACGGAATGCCC TACGTCTGCACCTATGTTGGCCTGTTCGACCATATGAAGGCGGTCGCGCGGACCAAGATCATCCACATGGCCAGGACCGT GTTCATCGCCAGCCGCAAGTTCGTTCCGAAGCTGTCGGTGTCGACGAACTATCAGGTTTCCTTGCCATCGCCACCGCCAT CGGCGCCCGATGACGTCACCTTGGACACTTGGGACAGCGGGCTTTGGGACAAGGCCGTCTGGGATGCCGGGTGGGTCAAG GCCGTGACGACCAAATGGACGTCGGTGGGCCAATCCGGGTTCATCATCGCCCCACAGGTTCAGGTGACGAGCGGCGTCAC GCCAACGCCCGATGCCGAACTGGTGGAGATCGACATGACCTATGAAGTTGGCGCGGTGGTCGTTTGA
Upstream 100 bases:
>100_bases CCGTCTACGCCGGTGCCGACAAGGGCTCGAACATCATCGCTGTCGGTCGCGGGCGCACACCAGTCGACACCGACCTGGCA TTTCCTGGGATCATCACGCC
Downstream 100 bases:
>100_bases AACTGCTGTTCGACCATAGCGATGAAGTCGCGCGGTTCGTCGCCGATATGACGCCTGGCTGTGAAGCCGGCTTTGGCAAC TGCAAGGCCATTGGCGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MRAGFRRVPVQAQAQQRHSTMTFPAPTRGKISNENLAAAGPKGAKVLENWFPTSTGIRLRGGAARHATIGTIPVVSMMSY DGPAGSFMFAADGTNIFDVTTPASPTVPPTAVVTSLTSGYFSYVQMPTPGGYYLSALNGTDSMRQFDGTTWTTVAALGPS INTNQLSFIWTYRNRQFFVQKNTLNVWFLPVDSISGTAQAYSLAGVFQDGGSVLCGGTWSLETGGGIDAKCVIISDRGEV AVFQGTNPADATAWSLVGRYAMSPLLGPRALMQAGGDLLMGMADGIVPISQAIQKDAAALALISVTRAIEPDWRKEVAAR TVLPWELLKWPQFNMGIVALPASPGQDRKVFVVNLQTGAWADYTGWDACCLVLHAGWAYFGTSDGKIMQCEVGGIDDGMP YVCTYVGLFDHMKAVARTKIIHMARTVFIASRKFVPKLSVSTNYQVSLPSPPPSAPDDVTLDTWDSGLWDKAVWDAGWVK AVTTKWTSVGQSGFIIAPQVQVTSGVTPTPDAELVEIDMTYEVGAVVV
Sequences:
>Translated_528_residues MRAGFRRVPVQAQAQQRHSTMTFPAPTRGKISNENLAAAGPKGAKVLENWFPTSTGIRLRGGAARHATIGTIPVVSMMSY DGPAGSFMFAADGTNIFDVTTPASPTVPPTAVVTSLTSGYFSYVQMPTPGGYYLSALNGTDSMRQFDGTTWTTVAALGPS INTNQLSFIWTYRNRQFFVQKNTLNVWFLPVDSISGTAQAYSLAGVFQDGGSVLCGGTWSLETGGGIDAKCVIISDRGEV AVFQGTNPADATAWSLVGRYAMSPLLGPRALMQAGGDLLMGMADGIVPISQAIQKDAAALALISVTRAIEPDWRKEVAAR TVLPWELLKWPQFNMGIVALPASPGQDRKVFVVNLQTGAWADYTGWDACCLVLHAGWAYFGTSDGKIMQCEVGGIDDGMP YVCTYVGLFDHMKAVARTKIIHMARTVFIASRKFVPKLSVSTNYQVSLPSPPPSAPDDVTLDTWDSGLWDKAVWDAGWVK AVTTKWTSVGQSGFIIAPQVQVTSGVTPTPDAELVEIDMTYEVGAVVV >Mature_528_residues MRAGFRRVPVQAQAQQRHSTMTFPAPTRGKISNENLAAAGPKGAKVLENWFPTSTGIRLRGGAARHATIGTIPVVSMMSY DGPAGSFMFAADGTNIFDVTTPASPTVPPTAVVTSLTSGYFSYVQMPTPGGYYLSALNGTDSMRQFDGTTWTTVAALGPS INTNQLSFIWTYRNRQFFVQKNTLNVWFLPVDSISGTAQAYSLAGVFQDGGSVLCGGTWSLETGGGIDAKCVIISDRGEV AVFQGTNPADATAWSLVGRYAMSPLLGPRALMQAGGDLLMGMADGIVPISQAIQKDAAALALISVTRAIEPDWRKEVAAR TVLPWELLKWPQFNMGIVALPASPGQDRKVFVVNLQTGAWADYTGWDACCLVLHAGWAYFGTSDGKIMQCEVGGIDDGMP YVCTYVGLFDHMKAVARTKIIHMARTVFIASRKFVPKLSVSTNYQVSLPSPPPSAPDDVTLDTWDSGLWDKAVWDAGWVK AVTTKWTSVGQSGFIIAPQVQVTSGVTPTPDAELVEIDMTYEVGAVVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56537; Mature: 56537
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGFRRVPVQAQAQQRHSTMTFPAPTRGKISNENLAAAGPKGAKVLENWFPTSTGIRLR CCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCCCCEECCCCCCHHHHHHCCCCCCCEEEE GGAARHATIGTIPVVSMMSYDGPAGSFMFAADGTNIFDVTTPASPTVPPTAVVTSLTSGY CCCCCCEEECCCCEEHEEECCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCC FSYVQMPTPGGYYLSALNGTDSMRQFDGTTWTTVAALGPSINTNQLSFIWTYRNRQFFVQ EEEEEECCCCCEEEEEECCCCHHHHCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEE KNTLNVWFLPVDSISGTAQAYSLAGVFQDGGSVLCGGTWSLETGGGIDAKCVIISDRGEV ECCEEEEEEEECCCCCCHHHEEEEEEEECCCCEEECCEEEECCCCCCCEEEEEEECCCCE AVFQGTNPADATAWSLVGRYAMSPLLGPRALMQAGGDLLMGMADGIVPISQAIQKDAAAL EEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEHHCCCHHHHHHHHHHHHHH ALISVTRAIEPDWRKEVAARTVLPWELLKWPQFNMGIVALPASPGQDRKVFVVNLQTGAW HHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCCCCEEEEEEECCCCC ADYTGWDACCLVLHAGWAYFGTSDGKIMQCEVGGIDDGMPYVCTYVGLFDHMKAVARTKI CCCCCHHHHHHHHHCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH IHMARTVFIASRKFVPKLSVSTNYQVSLPSPPPSAPDDVTLDTWDSGLWDKAVWDAGWVK HHHHHHHEEECCCCCCEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCHHHHCCCCHHE AVTTKWTSVGQSGFIIAPQVQVTSGVTPTPDAELVEIDMTYEVGAVVV EEEHHHHHCCCCCEEEECCEEEECCCCCCCCCEEEEEEEEEECCEEEC >Mature Secondary Structure MRAGFRRVPVQAQAQQRHSTMTFPAPTRGKISNENLAAAGPKGAKVLENWFPTSTGIRLR CCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCCCCEECCCCCCHHHHHHCCCCCCCEEEE GGAARHATIGTIPVVSMMSYDGPAGSFMFAADGTNIFDVTTPASPTVPPTAVVTSLTSGY CCCCCCEEECCCCEEHEEECCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCC FSYVQMPTPGGYYLSALNGTDSMRQFDGTTWTTVAALGPSINTNQLSFIWTYRNRQFFVQ EEEEEECCCCCEEEEEECCCCHHHHCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEE KNTLNVWFLPVDSISGTAQAYSLAGVFQDGGSVLCGGTWSLETGGGIDAKCVIISDRGEV ECCEEEEEEEECCCCCCHHHEEEEEEEECCCCEEECCEEEECCCCCCCEEEEEEECCCCE AVFQGTNPADATAWSLVGRYAMSPLLGPRALMQAGGDLLMGMADGIVPISQAIQKDAAAL EEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEHHCCCHHHHHHHHHHHHHH ALISVTRAIEPDWRKEVAARTVLPWELLKWPQFNMGIVALPASPGQDRKVFVVNLQTGAW HHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCCCCEEEEEEECCCCC ADYTGWDACCLVLHAGWAYFGTSDGKIMQCEVGGIDDGMPYVCTYVGLFDHMKAVARTKI CCCCCHHHHHHHHHCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH IHMARTVFIASRKFVPKLSVSTNYQVSLPSPPPSAPDDVTLDTWDSGLWDKAVWDAGWVK HHHHHHHEEECCCCCCEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCHHHHCCCCHHE AVTTKWTSVGQSGFIIAPQVQVTSGVTPTPDAELVEIDMTYEVGAVVV EEEHHHHHCCCCCEEEECCEEEECCCCCCCCCEEEEEEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA