| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470678
Identifier: 13470678
GI number: 13470678
Start: 329261
End: 329962
Strand: Reverse
Name: 13470678
Synonym: mll0453
Alternate gene names: NA
Gene position: 329962-329261 (Counterclockwise)
Preceding gene: 13470679
Following gene: 13470677
Centisome position: 4.69
GC content: 58.12
Gene sequence:
>702_bases ATGACGATCCTCAGCGTCATCCAGCAGGTATGCCCGGTCATCGGCCTGAATGTGCCGACGGCCGTTTTTTCGGCGACCGA CCGCGAACTGGTCGAGTTGCAGGCGCTTTCGAATGAGATGGCGCAGAGGATCGCTTTCGACACGAGGGACTGGACCAAGT TCAAGACCCTCTGCACGCTGACAGGCGATGGCTCAACGGTCGGGTTCAATTTCCCGTCCGATTACAAGCGCATGCTGAAG AAAGCACGCGTCTGGCCGTCTGCAAGTCCGTTCGCGCCTTACACACACTATTCCGATACTGACCAATGGCTTGGCATCAC AGTGCAGAATTTCCGCAGCATCATTGGTGCCTGGACGATGATCGGCGAGCAGATCCTGATCAAGCCGGCGATGGCCAATC TTTCGACGGCGCAATTCTACTACATCACCAACCAGATCATCAAAGACAAGGATGGCGCGCCGAAGGTCGCTTTCACCGCC GATGACGATGTTTTCCGGCTCGACGAGCGCGTGCTGAAGCTCGGCATGATCTGGCAGTGGAAGGCCAACAAGGGGCAGGC CTACGCTGAGGACATGACGAATTACGAGGACGCCTTGGCCGTCTACGCCGGTGCCGACAAGGGCTCGAACATCATCGCTG TCGGTCGCGGGCGCACACCAGTCGACACCGACCTGGCATTTCCTGGGATCATCACGCCATGA
Upstream 100 bases:
>100_bases GAAGGTCTACATCGCCAAGGAAACCGGCAGTCGTCCGCGCGGCAATCCAAACCGGGACACCTTGGTCGCTGCGGCCAAGG AACTGGCGTCGTAAGCCGCC
Downstream 100 bases:
>100_bases GGGCCGGTTTCCGCCGCGTACCGGTGCAGGCGCAAGCCCAGCAACGGCATAGCACGATGACATTCCCCGCGCCGACGCGC GGCAAGATTTCCAATGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTILSVIQQVCPVIGLNVPTAVFSATDRELVELQALSNEMAQRIAFDTRDWTKFKTLCTLTGDGSTVGFNFPSDYKRMLK KARVWPSASPFAPYTHYSDTDQWLGITVQNFRSIIGAWTMIGEQILIKPAMANLSTAQFYYITNQIIKDKDGAPKVAFTA DDDVFRLDERVLKLGMIWQWKANKGQAYAEDMTNYEDALAVYAGADKGSNIIAVGRGRTPVDTDLAFPGIITP
Sequences:
>Translated_233_residues MTILSVIQQVCPVIGLNVPTAVFSATDRELVELQALSNEMAQRIAFDTRDWTKFKTLCTLTGDGSTVGFNFPSDYKRMLK KARVWPSASPFAPYTHYSDTDQWLGITVQNFRSIIGAWTMIGEQILIKPAMANLSTAQFYYITNQIIKDKDGAPKVAFTA DDDVFRLDERVLKLGMIWQWKANKGQAYAEDMTNYEDALAVYAGADKGSNIIAVGRGRTPVDTDLAFPGIITP >Mature_232_residues TILSVIQQVCPVIGLNVPTAVFSATDRELVELQALSNEMAQRIAFDTRDWTKFKTLCTLTGDGSTVGFNFPSDYKRMLKK ARVWPSASPFAPYTHYSDTDQWLGITVQNFRSIIGAWTMIGEQILIKPAMANLSTAQFYYITNQIIKDKDGAPKVAFTAD DDVFRLDERVLKLGMIWQWKANKGQAYAEDMTNYEDALAVYAGADKGSNIIAVGRGRTPVDTDLAFPGIITP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25906; Mature: 25775
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILSVIQQVCPVIGLNVPTAVFSATDRELVELQALSNEMAQRIAFDTRDWTKFKTLCTL CCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE TGDGSTVGFNFPSDYKRMLKKARVWPSASPFAPYTHYSDTDQWLGITVQNFRSIIGAWTM ECCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHH IGEQILIKPAMANLSTAQFYYITNQIIKDKDGAPKVAFTADDDVFRLDERVLKLGMIWQW HHHHHEEEHHHCCCCCEEEEEEHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCEEEE KANKGQAYAEDMTNYEDALAVYAGADKGSNIIAVGRGRTPVDTDLAFPGIITP ECCCCCCHHHHHCCHHHHEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TILSVIQQVCPVIGLNVPTAVFSATDRELVELQALSNEMAQRIAFDTRDWTKFKTLCTL CHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE TGDGSTVGFNFPSDYKRMLKKARVWPSASPFAPYTHYSDTDQWLGITVQNFRSIIGAWTM ECCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHH IGEQILIKPAMANLSTAQFYYITNQIIKDKDGAPKVAFTADDDVFRLDERVLKLGMIWQW HHHHHEEEHHHCCCCCEEEEEEHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCEEEE KANKGQAYAEDMTNYEDALAVYAGADKGSNIIAVGRGRTPVDTDLAFPGIITP ECCCCCCHHHHHCCHHHHEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA