| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470673
Identifier: 13470673
GI number: 13470673
Start: 321579
End: 323684
Strand: Reverse
Name: 13470673
Synonym: mll0446
Alternate gene names: NA
Gene position: 323684-321579 (Counterclockwise)
Preceding gene: 13470674
Following gene: 13470671
Centisome position: 4.6
GC content: 64.67
Gene sequence:
>2106_bases ATGGCCCAGCTTGTCCCGGTCGACACCGATCCCTTTGCAACGACACCGGCCGCCGCGGCGCCGGTAGCCGTGCCGGCGCA GGCTTCGCCGGCCCTTGTTCCGGTCGACCATGATCCGTTTGCCGGGACGAACCAGCCGCCGGGCGTGCCGGTCTATGTTC CGCCCGGCGTCAAAGGCTATGACCCGCAAACTGGGGAGGTCGCTCCGGGGCAGTACACGACGGGCAACGACCTTGGGCTT GCGTTCACGTCGTCAGTCCTCAACGGCGTCCCTATCGTCGGGCCATATCTGAAACAGGGAGCAGAAAGCCTTGGTGCCAA AGTCAACTCGGCGCTGTCTGGCAAGTCGGAGGCGGATGTTCGGTATGCATCCGATCAGGCCACAAACCGCGCTGTAAACG ACAATCCTTACACGGCCGGCAGCGGCAATATCGTGGGTGCTGTTGCAGGCACGTTGCCTGCCGTCGTCGCTGCTCCGGAG CTGTTCGGCGCGGGTGAAGCTGGGCTTGGTATGCGCTCAGTTGTCAGCGCGTTGACAGGCGGCACGATCAACGCCGCCGA TTCCGGGGTGCGCTCGGGCGGCGATCCTGCTGCGATGGAAAGGAGAGGTTTGATCGGTGCAGGTTTCGGCCTGATCGCCC CAGGCGGCGGCACTCTGATTGGAAAGGGCATCGGCAGCGCGGTCGACTATTTGACCCGGCCTGGTGCATCGGAGCTTGGC AACTTCTCGCGGGCGACACTTGCCAAGATCACCGGGGCGATGAACGCGGACGGGCTCACGCCTCAAGCCGTACAGCAGCG GCTTACCCGGCTTGGCCCTGACGCCATGCTTGCCGATGCTGGTCCGAACCTTCAGCAGACGGCCGCCGGCCTTGTGGCGA AGCCCGGAGAGGCGCGCGGCATTATCCAGGATGCTATCGCGCAGCGAGATGCAGGTGCGAACCAGCGCATCCGAAGCACG TTGGATAGCGAACTTGGCCCTGCGCCGGTTCCATCCCAGATCAACGCTGGCATCACTGCGAACCAGGCCGCGCTTTCGCC AGAGTACCGGGTCGCCCTTCAAAACGCTGGCCCGGTCGATACCTTGCCGATCGCGCGATATCTCGACCAGGACATTCAGA CGTTGCGGGGCGAACCGCAGCGCGTCTTGCAGCGCGTCCGTGCCATGCTGGACCATGTGCCGACCCCGCAAGAGATTGCC CAGGCTCGCGCCCTTGGCCAGCCGCCGCCCGGCAACTCTCTGGTGACTGATGCCGGCGAGTTGCTGAACGCCCGGCACGC TGTCGACGACATGTTACAGACCACCCAGGGGTCAAACGCCCTGAATGCGCTTTCGACCGCGCGACAGGCGATCGATGATG AGTTGCGCGCATCGGTTCCTGGCATCAAGGAAGTCGATGCGAAATATTCCGAGCTTGCCCGCCAGCGTGATGCGGTTCAG CGGGGCCAGACGGTGCTTTCCAGCGGCCGGGAGTCCCCAAGGCCGGCGGAACTCGCGCAAGAGGTCCAGCAGGGCGCTCA GCCTCAGGGAATGCAGGTCGGCCCCTCCGCAGTACCCGTCCGGCTCCGGGAGGGCGCGCGGGCCGAAATCGAGCGCATCG TTGGCACGAACCTGAACGACCGTGTTGCGCTTCAGGGCTTGATCAAGGGTCAAGGTGACTGGAACCCGCAAAGGCTGGCT ACGCTGTTCGGGCAAGACAAGGCGCAGCGCTTGCTCGATGTGCTCGACGCCGAAAGGACTTTCGCCAACACCAGCAACTT CGTCACGAAGAACTCGGCGACCGCCGCGCGTCTCCAGGCTGTGAAAAGCCTTGACGGCGGCGATGTGCCCGGGCTCGGCA TGGTCGACAGCTACAAGGCCGGCGGTCTGCTGGGATTGGGTCGCGCTGGCGCGCTGAAGGGCTTGGGCCCGGTGGTCGAA GCGATCCGCAGCAAGGGAGCAAACGCGGCCAATTCAGCGCTCGCTCGCGGTCTCGTTTCAGGAGATCACGACGCTGTGGT TAAGGCGCTGATCGCTGCGAGCCCGGTACCGATCCCGACAAAAGCGATTTCGAAGGTCGCAGAGGCTCTGTTGCTCGGTT CTGGGTCGGCGGCGATGCGTCCGTGA
Upstream 100 bases:
>100_bases GGGCGCGCCGCCGGTTTCTGGCGCTACCAAGGCACCAGACGGCAACTGGTACGTTCCGGACCCGGCGCGGCCCGGCAAGT ATCTGAAGGTGGTTCCGTAA
Downstream 100 bases:
>100_bases GGCTTCCGTTTCAGCGAACTTGAATGAAGGCCGGTCCAACGATAATGCCCAGCACAAACAGCAGGCTCACGAAGAGGATG TAGCCCGTCGACTTCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MAQLVPVDTDPFATTPAAAAPVAVPAQASPALVPVDHDPFAGTNQPPGVPVYVPPGVKGYDPQTGEVAPGQYTTGNDLGL AFTSSVLNGVPIVGPYLKQGAESLGAKVNSALSGKSEADVRYASDQATNRAVNDNPYTAGSGNIVGAVAGTLPAVVAAPE LFGAGEAGLGMRSVVSALTGGTINAADSGVRSGGDPAAMERRGLIGAGFGLIAPGGGTLIGKGIGSAVDYLTRPGASELG NFSRATLAKITGAMNADGLTPQAVQQRLTRLGPDAMLADAGPNLQQTAAGLVAKPGEARGIIQDAIAQRDAGANQRIRST LDSELGPAPVPSQINAGITANQAALSPEYRVALQNAGPVDTLPIARYLDQDIQTLRGEPQRVLQRVRAMLDHVPTPQEIA QARALGQPPPGNSLVTDAGELLNARHAVDDMLQTTQGSNALNALSTARQAIDDELRASVPGIKEVDAKYSELARQRDAVQ RGQTVLSSGRESPRPAELAQEVQQGAQPQGMQVGPSAVPVRLREGARAEIERIVGTNLNDRVALQGLIKGQGDWNPQRLA TLFGQDKAQRLLDVLDAERTFANTSNFVTKNSATAARLQAVKSLDGGDVPGLGMVDSYKAGGLLGLGRAGALKGLGPVVE AIRSKGANAANSALARGLVSGDHDAVVKALIAASPVPIPTKAISKVAEALLLGSGSAAMRP
Sequences:
>Translated_701_residues MAQLVPVDTDPFATTPAAAAPVAVPAQASPALVPVDHDPFAGTNQPPGVPVYVPPGVKGYDPQTGEVAPGQYTTGNDLGL AFTSSVLNGVPIVGPYLKQGAESLGAKVNSALSGKSEADVRYASDQATNRAVNDNPYTAGSGNIVGAVAGTLPAVVAAPE LFGAGEAGLGMRSVVSALTGGTINAADSGVRSGGDPAAMERRGLIGAGFGLIAPGGGTLIGKGIGSAVDYLTRPGASELG NFSRATLAKITGAMNADGLTPQAVQQRLTRLGPDAMLADAGPNLQQTAAGLVAKPGEARGIIQDAIAQRDAGANQRIRST LDSELGPAPVPSQINAGITANQAALSPEYRVALQNAGPVDTLPIARYLDQDIQTLRGEPQRVLQRVRAMLDHVPTPQEIA QARALGQPPPGNSLVTDAGELLNARHAVDDMLQTTQGSNALNALSTARQAIDDELRASVPGIKEVDAKYSELARQRDAVQ RGQTVLSSGRESPRPAELAQEVQQGAQPQGMQVGPSAVPVRLREGARAEIERIVGTNLNDRVALQGLIKGQGDWNPQRLA TLFGQDKAQRLLDVLDAERTFANTSNFVTKNSATAARLQAVKSLDGGDVPGLGMVDSYKAGGLLGLGRAGALKGLGPVVE AIRSKGANAANSALARGLVSGDHDAVVKALIAASPVPIPTKAISKVAEALLLGSGSAAMRP >Mature_700_residues AQLVPVDTDPFATTPAAAAPVAVPAQASPALVPVDHDPFAGTNQPPGVPVYVPPGVKGYDPQTGEVAPGQYTTGNDLGLA FTSSVLNGVPIVGPYLKQGAESLGAKVNSALSGKSEADVRYASDQATNRAVNDNPYTAGSGNIVGAVAGTLPAVVAAPEL FGAGEAGLGMRSVVSALTGGTINAADSGVRSGGDPAAMERRGLIGAGFGLIAPGGGTLIGKGIGSAVDYLTRPGASELGN FSRATLAKITGAMNADGLTPQAVQQRLTRLGPDAMLADAGPNLQQTAAGLVAKPGEARGIIQDAIAQRDAGANQRIRSTL DSELGPAPVPSQINAGITANQAALSPEYRVALQNAGPVDTLPIARYLDQDIQTLRGEPQRVLQRVRAMLDHVPTPQEIAQ ARALGQPPPGNSLVTDAGELLNARHAVDDMLQTTQGSNALNALSTARQAIDDELRASVPGIKEVDAKYSELARQRDAVQR GQTVLSSGRESPRPAELAQEVQQGAQPQGMQVGPSAVPVRLREGARAEIERIVGTNLNDRVALQGLIKGQGDWNPQRLAT LFGQDKAQRLLDVLDAERTFANTSNFVTKNSATAARLQAVKSLDGGDVPGLGMVDSYKAGGLLGLGRAGALKGLGPVVEA IRSKGANAANSALARGLVSGDHDAVVKALIAASPVPIPTKAISKVAEALLLGSGSAAMRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71475; Mature: 71344
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLVPVDTDPFATTPAAAAPVAVPAQASPALVPVDHDPFAGTNQPPGVPVYVPPGVKGY CCCEECCCCCCCCCCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCC DPQTGEVAPGQYTTGNDLGLAFTSSVLNGVPIVGPYLKQGAESLGAKVNSALSGKSEADV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE RYASDQATNRAVNDNPYTAGSGNIVGAVAGTLPAVVAAPELFGAGEAGLGMRSVVSALTG EECCCHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHCC GTINAADSGVRSGGDPAAMERRGLIGAGFGLIAPGGGTLIGKGIGSAVDYLTRPGASELG CCCCCCCCCCCCCCCHHHHHHCCCEECCCCEECCCCCCEEHHHHHHHHHHHHCCCHHHHC NFSRATLAKITGAMNADGLTPQAVQQRLTRLGPDAMLADAGPNLQQTAAGLVAKPGEARG CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCHHHH IIQDAIAQRDAGANQRIRSTLDSELGPAPVPSQINAGITANQAALSPEYRVALQNAGPVD HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCC TLPIARYLDQDIQTLRGEPQRVLQRVRAMLDHVPTPQEIAQARALGQPPPGNSLVTDAGE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHH LLNARHAVDDMLQTTQGSNALNALSTARQAIDDELRASVPGIKEVDAKYSELARQRDAVQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RGQTVLSSGRESPRPAELAQEVQQGAQPQGMQVGPSAVPVRLREGARAEIERIVGTNLND HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCC RVALQGLIKGQGDWNPQRLATLFGQDKAQRLLDVLDAERTFANTSNFVTKNSATAARLQA HHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHH VKSLDGGDVPGLGMVDSYKAGGLLGLGRAGALKGLGPVVEAIRSKGANAANSALARGLVS HHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC GDHDAVVKALIAASPVPIPTKAISKVAEALLLGSGSAAMRP CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AQLVPVDTDPFATTPAAAAPVAVPAQASPALVPVDHDPFAGTNQPPGVPVYVPPGVKGY CCEECCCCCCCCCCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCC DPQTGEVAPGQYTTGNDLGLAFTSSVLNGVPIVGPYLKQGAESLGAKVNSALSGKSEADV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE RYASDQATNRAVNDNPYTAGSGNIVGAVAGTLPAVVAAPELFGAGEAGLGMRSVVSALTG EECCCHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHCC GTINAADSGVRSGGDPAAMERRGLIGAGFGLIAPGGGTLIGKGIGSAVDYLTRPGASELG CCCCCCCCCCCCCCCHHHHHHCCCEECCCCEECCCCCCEEHHHHHHHHHHHHCCCHHHHC NFSRATLAKITGAMNADGLTPQAVQQRLTRLGPDAMLADAGPNLQQTAAGLVAKPGEARG CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCHHHH IIQDAIAQRDAGANQRIRSTLDSELGPAPVPSQINAGITANQAALSPEYRVALQNAGPVD HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCC TLPIARYLDQDIQTLRGEPQRVLQRVRAMLDHVPTPQEIAQARALGQPPPGNSLVTDAGE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHH LLNARHAVDDMLQTTQGSNALNALSTARQAIDDELRASVPGIKEVDAKYSELARQRDAVQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RGQTVLSSGRESPRPAELAQEVQQGAQPQGMQVGPSAVPVRLREGARAEIERIVGTNLND HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCC RVALQGLIKGQGDWNPQRLATLFGQDKAQRLLDVLDAERTFANTSNFVTKNSATAARLQA HHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHH VKSLDGGDVPGLGMVDSYKAGGLLGLGRAGALKGLGPVVEAIRSKGANAANSALARGLVS HHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC GDHDAVVKALIAASPVPIPTKAISKVAEALLLGSGSAAMRP CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA