| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470671
Identifier: 13470671
GI number: 13470671
Start: 320053
End: 321102
Strand: Reverse
Name: 13470671
Synonym: mll0443
Alternate gene names: NA
Gene position: 321102-320053 (Counterclockwise)
Preceding gene: 13470673
Following gene: 13470670
Centisome position: 4.56
GC content: 63.05
Gene sequence:
>1050_bases ATGCCAATGCCCCGTGACGGCTCTGGAGTTATGTCGTGGCCGCCGAACGGCAATGCCGTCACGGCAACGCCGATCGACAG CAGCAAATACAATGCCCGGTTTGCGGATTTGCTATCGGACCTGAATGCTGCCCGACCGATTACCGCAGGCGGCACCGGGG CGAATACCGCCATCGGCGGCAACGACAATCTGAACACCGCTGGCGCGAATATCGCCTCGGCATCGACCGTCAATCTGGCC AGTGCGACCGGGGTCGCGGTCACGATAACCGGGGTGGCTAGGATCAACAGCTTTGGCACGGCAGCGGCCGGCGTCGAGCG CGTTCTGACCTTCGCGGGCGTCCTTCCGCTGACCTACAATGCTACGTCCATGATTTTGCCAGGCGCCGCCGACATCGTCA CGGCTGTTGGCGATGTCGGCACCTTCCGCTCGCTTGGCGGCGGCAATTGGCGCTGCGTTTCCTACGAGACGGCGGACGGC CAGCCGATTTCGAGCACCTTCACCTCGTCGCAAACGTTCAATGCTGGTCTGGCGGCAAACAACAGCACCGGGCAGGCCAT TGGCGTTTTGGCGGGCCCAGCGGCGACGGCGACCCTGTTCTACGGCCACGCGCTTGCCGGGGCGGGTAACGCGGCCTTTA TCACTCTCGACCGACCGGGCTCCTTTGCCGCGAATTTCGGCATCGATACGGATAACAAGTGGAAGGTCGGCGGCTTTTCC ATGGGCGCGAACGCCTATGAAATCGTCCACATGGGCAACTACACGACCCTGCTCGACCCGCGCTATTTCCAGACAGCGAA CTTCGCCTCAACCCTTGCCGGCTTGGCGGTGGGTGCTGTCGGAACCTCAGCCCTTTTGGGTGCCAACCCCGCAGCGGACC TAAGCCCTGGCAACACTGTCGCTGGCAGCAATCTTCGCTTCACCCATGCTGGCGGTTTCGTCGGGTCGGGGGCGACCGCG CCGTCCGGCACTTGGCGGGCCATGGGTAACACCACCAGCGCCGGTTTCAACACCTCCGCTGGCGCTACAGTTTTCTTGAG GATTTCGTGA
Upstream 100 bases:
>100_bases TGGCGGATAGAGCTGAACTAGTGTCACAGCGTCACACATAAGCGAAAAGCGCTGCCGGTAAAAGGCTGACTAGTTCGCCG ATCTTCTATTTTGATGGAGA
Downstream 100 bases:
>100_bases TGGAGTACCGCAACGCAGCTTTTAATCAGTTCGGCACTGTCGACCTGGAAATCAACCACCCCGAATACGGGTGGATACCC TTCACGGCGTCACCAGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MPMPRDGSGVMSWPPNGNAVTATPIDSSKYNARFADLLSDLNAARPITAGGTGANTAIGGNDNLNTAGANIASASTVNLA SATGVAVTITGVARINSFGTAAAGVERVLTFAGVLPLTYNATSMILPGAADIVTAVGDVGTFRSLGGGNWRCVSYETADG QPISSTFTSSQTFNAGLAANNSTGQAIGVLAGPAATATLFYGHALAGAGNAAFITLDRPGSFAANFGIDTDNKWKVGGFS MGANAYEIVHMGNYTTLLDPRYFQTANFASTLAGLAVGAVGTSALLGANPAADLSPGNTVAGSNLRFTHAGGFVGSGATA PSGTWRAMGNTTSAGFNTSAGATVFLRIS
Sequences:
>Translated_349_residues MPMPRDGSGVMSWPPNGNAVTATPIDSSKYNARFADLLSDLNAARPITAGGTGANTAIGGNDNLNTAGANIASASTVNLA SATGVAVTITGVARINSFGTAAAGVERVLTFAGVLPLTYNATSMILPGAADIVTAVGDVGTFRSLGGGNWRCVSYETADG QPISSTFTSSQTFNAGLAANNSTGQAIGVLAGPAATATLFYGHALAGAGNAAFITLDRPGSFAANFGIDTDNKWKVGGFS MGANAYEIVHMGNYTTLLDPRYFQTANFASTLAGLAVGAVGTSALLGANPAADLSPGNTVAGSNLRFTHAGGFVGSGATA PSGTWRAMGNTTSAGFNTSAGATVFLRIS >Mature_348_residues PMPRDGSGVMSWPPNGNAVTATPIDSSKYNARFADLLSDLNAARPITAGGTGANTAIGGNDNLNTAGANIASASTVNLAS ATGVAVTITGVARINSFGTAAAGVERVLTFAGVLPLTYNATSMILPGAADIVTAVGDVGTFRSLGGGNWRCVSYETADGQ PISSTFTSSQTFNAGLAANNSTGQAIGVLAGPAATATLFYGHALAGAGNAAFITLDRPGSFAANFGIDTDNKWKVGGFSM GANAYEIVHMGNYTTLLDPRYFQTANFASTLAGLAVGAVGTSALLGANPAADLSPGNTVAGSNLRFTHAGGFVGSGATAP SGTWRAMGNTTSAGFNTSAGATVFLRIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34698; Mature: 34567
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMPRDGSGVMSWPPNGNAVTATPIDSSKYNARFADLLSDLNAARPITAGGTGANTAIGG CCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCEECC NDNLNTAGANIASASTVNLASATGVAVTITGVARINSFGTAAAGVERVLTFAGVLPLTYN CCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEC ATSMILPGAADIVTAVGDVGTFRSLGGGNWRCVSYETADGQPISSTFTSSQTFNAGLAAN CCEEECCCHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCEECC NSTGQAIGVLAGPAATATLFYGHALAGAGNAAFITLDRPGSFAANFGIDTDNKWKVGGFS CCCCCEEEEEECCCHHEEEEEHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCEEECCEE MGANAYEIVHMGNYTTLLDPRYFQTANFASTLAGLAVGAVGTSALLGANPAADLSPGNTV ECCCEEEEEEECCEEEEECCCHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEE AGSNLRFTHAGGFVGSGATAPSGTWRAMGNTTSAGFNTSAGATVFLRIS CCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure PMPRDGSGVMSWPPNGNAVTATPIDSSKYNARFADLLSDLNAARPITAGGTGANTAIGG CCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCEECC NDNLNTAGANIASASTVNLASATGVAVTITGVARINSFGTAAAGVERVLTFAGVLPLTYN CCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEC ATSMILPGAADIVTAVGDVGTFRSLGGGNWRCVSYETADGQPISSTFTSSQTFNAGLAAN CCEEECCCHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCEECC NSTGQAIGVLAGPAATATLFYGHALAGAGNAAFITLDRPGSFAANFGIDTDNKWKVGGFS CCCCCEEEEEECCCHHEEEEEHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCEEECCEE MGANAYEIVHMGNYTTLLDPRYFQTANFASTLAGLAVGAVGTSALLGANPAADLSPGNTV ECCCEEEEEEECCEEEEECCCHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEE AGSNLRFTHAGGFVGSGATAPSGTWRAMGNTTSAGFNTSAGATVFLRIS CCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA