| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is rpoC [H]
Identifier: 13470543
GI number: 13470543
Start: 197699
End: 201895
Strand: Direct
Name: rpoC [H]
Synonym: mlr0277
Alternate gene names: 13470543
Gene position: 197699-201895 (Clockwise)
Preceding gene: 13470542
Following gene: 13470544
Centisome position: 2.81
GC content: 62.71
Gene sequence:
>4197_bases ATGAACCAAGAGGTCATGAATCTCTTCAATCCGCAGGCGCCTGCGCAGGTGTTCGATTCCATCCGGATCTCACTGGCCAG CCCTGAGAAGATTCTGTCCTGGTCGTTCGGCGAGATCAAGAAGCCGGAGACCATCAACTACCGCACCTTCAAGCCGGAGC GTGACGGTCTGTTCTGCGCGCGCATTTTTGGCCCGATCAAGGACTATGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAG TACAAGGGCGTCATCTGCGAGAAGTGCGGCGTCGAAGTCACGCTGTCGCGCGTCCGTCGCGAGCGCATGGGCCATATCGA GCTCGCTGCGCCCGTCGCCCATATCTGGTTCCTGAAGTCGCTGCCCTCGCGCATCGGCACGCTGCTCGACATGACGCTGA AGGACATCGAGCGCGTCCTTTACTTCGAGAACTACATCGTCACCGAACCTGGCCTCACCGCGCTGAAGGAGCACCAGCTG CTCAGCGAGGAAGAGTACATGATCGCCGTCGACGAGTATGGCGAGGATTCGTTCACCGCCATGATTGGCGCGGAGGCCAT TCATGACCTTCTGGCCGGTATGGATCTGGAGAAGATCGCCGGCGACCTGCGTTCGGAACTGGCTTCGACCACGTCCGAGC TGAAGCAGAAGAAGTATCTGAAGCGGCTCAAGGTCGTCGAGAACTTCATGGAATCCGGCAACCGTCCGGAATGGATGATC ATGAAGGTGGTCCCGGTGATCCCGCCGGACCTGCGCCCGCTCGTCCCGTTGGACGGCGGCCGTTTCGCCACGTCCGACCT GAACGATCTCTATCGCCGCGTCATCAACCGCAACAACCGCTTGAAGCGGCTGATCGAGCTGCGCGCGCCTGGCATCATCG TGCGCAATGAAAAGCGCATGCTGCAGGAAGCCGTCGACGCACTGTTCGACAACGGCCGTCGCGGCCGCGTCATCACCGGC GCCAACAAGCGTCCGCTGAAGTCGCTGTCCGACATGCTGAAGGGCAAGCAGGGCAGGTTCCGTCAGAACCTGCTCGGCAA GCGCGTCGACTATTCCGGCCGCTCGGTCATCGTCACCGGTCCGGAGCTCAAGCTGCACCAGTGCGGCCTGCCGAAGAAGA TGGCGCTCGAACTGTTCAAGCCCTTCATCTACGCCCGTCTCGACGCCAAGGGTTACTCCTCGACCGTCAAGCAGGCCAAG AAGCTGGTCGAGAAGGAGCGTCCGGAAGTCTGGGATATTCTCGACGAGGTCATCCGCGAGCACCCGGTTCTGCTCAACCG CGCGCCGACGCTGCATCGCCTCGGCATCCAGGCGTTCGAGCCGATCCTGATCGAAGGCAAGGCGATCCAGCTGCACCCGC TGGTCTGCACGGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCGGTCCACGTGCCGCTGTCCCTGGAAGCGCAGCTT GAAGCCCGCGTGCTGATGATGTCGACCAACAACATCCTGCACCCGGCTTCCGGCGCGCCGATCATCGTGCCGTCGCAGGA CATGGTTCTGGGTCTCTACTATCTCTCGATCGTCAACCAGAACGAGCCGGGCGAGGGCATGGTGTTTGCCGACATGGGCG AACTCCAGCACGCGCTCGAGACCAAGGCGGTGACGCTGCACGCCAAGATCAAGGGCCGCTTCCGCACCGTCGACGCCGAA GGCAAGGTCGTGTCGAAGATCCACGACACCACGCCTGGCCGCATGATCATCGGCGAGCTTCTGCCGAAGAACGTCAATGT GCCTTACGAGACCGCCAACCAGGAGATGACCAAGAAGAACATCTCCAAGATGATCGACACCGTCTACCGCCATTGCGGTC AGAAGGAGACGGTCATTTTCTGCGACCGCATCATGGCGCTCGGCTTCGCTCACGCCTGCCGTGCCGGCATTTCGTTCGGC AAGGACGACATGCTGATCCCGGACAGCAAGATCAAGCTGGTCTCCGACACCGAGGCTTTGGCCAAGGAATACGAGCAGCA GTACAATGACGGCCTGATCACGCAGGGCGAGAAGTACAACAAGGTCGTCGACGCCTGGGCCAAGTGCTCGGAAAAGGTCG CCGACGAGATGATGGCCCGCATCAAGGCGGTCGAGTTCGAGGACAATGGCCGTCAGAAGCCGATGAACTCGATCTACATG ATGTCGCACTCCGGTGCGCGTGGCTCGCCCACCCAGATGCGTCAGCTTGCCGGCATGCGCGGCCTGATGGCGAAGCCCTC GGGTGAAATCATTGAGACGCCGATCATCTCGAACTTCAAGGAAGGCCTGACCGTGCTCGAGTACTTCAACTCGACCCACG GCGCCCGCAAGGGTCTGGCCGACACCGCCTTGAAGACGGCGAACTCGGGTTACCTCACTCGCCGTCTGGTCGACGTGGCG CAGGACTGCATCGTCAACTCCGTGGATTGCGGCACCGACAAGGGCCTCACCATGCAGCCGATCGTCGATGCCGGTCAGGT TGTCGCTTCGGTCGGCCAGCGCGTGCTGGGCCGCACCGCGCTCGACGACATCAACCATCCGGTGACCGGCGATCTGCTGG TCAAGGCCGGAACGCTGATGGACGAGCGTGACGTGGAGCAGATCGAAAAGGCCGGCGTCCAGTCGGTCCGCATCCGCTCG GCACTGACCTGCGAGGTCAGGGTCGGCGTGTGCGCGGTCTGCTACGGACGCGATCTGGCGCGCGGCACCCCGGTCAACCA GGGTGAAGCGGTCGGCGTCATCGCGGCGCAGTCGATCGGCGAGCCGGGCACCCAGCTCACCATGCGTACCTTCCACATGG GCGGTACCGCGCAGGTGGTGGATAGCTCGTTCCTTGAAGCCTCCTATGAGGGCAAGGTCGAGATCCGCAACCGCAACGTG GTGCGCAACTCGGACGGCCAGCAGATGGTCATGGGCCGCAACATGGCGGTGCTGATCCTCGACGAAGCCGGCAAGGAGCG CGCCACGCACCGTGTCACCTATGGTTCGCGTATCTTCGTGGACGATGGCGACAAGGTGAAGCGCGGCCAGCGTATCGCCG AGTGGGATCCCTACACCCGCCCGATCCTCACCGAAATCGAGGGCAGGGTGGCGTTCGAGGATCTGGTCGACGGCATTTCC GTCCAGGAAACGGCCGACGAGTCGACCGGCATCACCAAGCGTGAGGTCATCGACTGGCGTTCGACGCCGCGCGGCAACGA TCTGAAGCCGGCGATCGTCGTTCAGGACGCCAAGGGCAAGGTCGGCAAGCTGTCGAAGGGTGGCGATGCCCGCTTCCTGC TCTCGGTCGAGGCCATTCTCTCGGTCGAGCCGGGTGCGCAGGTTCGTCCCGGCGACGTGCTGGCGCGTATCCCGATGGAA AGCGCCAAGACCAAGGACATCACCGGCGGTCTGCCGCGTGTTGCCGAACTGTTCGAGGCACGTCGTCCGAAGGATCACGC CATCATCGCCGAGATCGATGGCACGATCCGCTTCGGCCGCGACTACAAGAACAAGCGCCGCATCATCATCGAGCCGCATG ACTCGACGCTCGAGCCGGTCGAATACCTGATCCCGAAGGGCAAGCCGTTCCATCTCCAGGACGGCGACGTCATCGAGAAG GGCGACTACATCCTCGACGGCAATCCGGCGCCGCACGACATCCTGGCGATCAAGGGCGTGGAGGCACTTGCTTCCTACCT CGTCAACGAGATCCAGGAAGTCTACCGCCTGCAGGGCGTGTCGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGA TGCTGCAGAAGGTCGAGATCACCACGCAGGGCGACTCGACCTACATTCCGGGCGACCACGTCGACGTGATCGAACTGGAA GAGGTCAACGAGCGCCTGATCGAGGACGGCAAGAAGCCGGCCGAAGGTCAGCCGGTGCTGCTCGGCATCACCAAGGCCTC GCTGCAGACGCCGTCCTTCATCTCGGCCGCCTCCTTCCAGGAGACGACCAGGGTGCTGACGGAAGCCGCGGTTGCCGGCA AGACCGACATGCTGCAGGGCTTGAAGGAAAACGTCATCGTCGGCCGGCTGATCCCGGCCGGTACGGGCGGCACGATGAGC CAGATCCGGCGCATCGCCACCTCGCGTGACGAATTGATCATCGACGAGCGCCGCAAGGCCTCCGGTGTGGAAGTCGCCGA GCCGATGCTGGCCGATATGACAACCGCCGCGCAGTAA
Upstream 100 bases:
>100_bases CGCAAAGGAATTCGACGGCCGGTGGCCGACAAAAGATGGCGGGCGTTTGGCCCGCGACTAGATGCAAGGGGTTTTCGAGG ACCCCGAAAAGGAGAACGGC
Downstream 100 bases:
>100_bases GCGCGGCGGGAGCAATCCCAGGAAAAGTGTAAAACGGTTTTCCCACGGGAATTGCGCCGGAAAAAGCAGTAAATCTCAGG CAACAAGGCCGTCGGGGTAA
Product: DNA-directed RNA polymerase subunit beta'
Products: NA
Alternate protein names: RNAP subunit beta'; RNA polymerase subunit beta'; Transcriptase subunit beta' [H]
Number of amino acids: Translated: 1398; Mature: 1398
Protein sequence:
>1398_residues MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMK YKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQL LSEEEYMIAVDEYGEDSFTAMIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRMLQEAVDALFDNGRRGRVITG ANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAK KLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALETKAVTLHAKIKGRFRTVDAE GKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKNISKMIDTVYRHCGQKETVIFCDRIMALGFAHACRAGISFG KDDMLIPDSKIKLVSDTEALAKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVA QDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTALDDINHPVTGDLLVKAGTLMDERDVEQIEKAGVQSVRIRS ALTCEVRVGVCAVCYGRDLARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTRPILTEIEGRVAFEDLVDGIS VQETADESTGITKREVIDWRSTPRGNDLKPAIVVQDAKGKVGKLSKGGDARFLLSVEAILSVEPGAQVRPGDVLARIPME SAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEITTQGDSTYIPGDHVDVIELE EVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMS QIRRIATSRDELIIDERRKASGVEVAEPMLADMTTAAQ
Sequences:
>Translated_1398_residues MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMK YKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQL LSEEEYMIAVDEYGEDSFTAMIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRMLQEAVDALFDNGRRGRVITG ANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAK KLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALETKAVTLHAKIKGRFRTVDAE GKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKNISKMIDTVYRHCGQKETVIFCDRIMALGFAHACRAGISFG KDDMLIPDSKIKLVSDTEALAKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVA QDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTALDDINHPVTGDLLVKAGTLMDERDVEQIEKAGVQSVRIRS ALTCEVRVGVCAVCYGRDLARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTRPILTEIEGRVAFEDLVDGIS VQETADESTGITKREVIDWRSTPRGNDLKPAIVVQDAKGKVGKLSKGGDARFLLSVEAILSVEPGAQVRPGDVLARIPME SAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEITTQGDSTYIPGDHVDVIELE EVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMS QIRRIATSRDELIIDERRKASGVEVAEPMLADMTTAAQ >Mature_1398_residues MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMK YKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQL LSEEEYMIAVDEYGEDSFTAMIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRMLQEAVDALFDNGRRGRVITG ANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAK KLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALETKAVTLHAKIKGRFRTVDAE GKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKNISKMIDTVYRHCGQKETVIFCDRIMALGFAHACRAGISFG KDDMLIPDSKIKLVSDTEALAKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVA QDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTALDDINHPVTGDLLVKAGTLMDERDVEQIEKAGVQSVRIRS ALTCEVRVGVCAVCYGRDLARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTRPILTEIEGRVAFEDLVDGIS VQETADESTGITKREVIDWRSTPRGNDLKPAIVVQDAKGKVGKLSKGGDARFLLSVEAILSVEPGAQVRPGDVLARIPME SAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEITTQGDSTYIPGDHVDVIELE EVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMS QIRRIATSRDELIIDERRKASGVEVAEPMLADMTTAAQ
Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]
COG id: COG0086
COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RNA polymerase beta' chain family [H]
Homologues:
Organism=Homo sapiens, GI4505939, Length=580, Percent_Identity=27.5862068965517, Blast_Score=152, Evalue=3e-36, Organism=Homo sapiens, GI39725938, Length=654, Percent_Identity=26.4525993883792, Blast_Score=146, Evalue=1e-34, Organism=Homo sapiens, GI103471997, Length=250, Percent_Identity=30.8, Blast_Score=91, Evalue=7e-18, Organism=Escherichia coli, GI2367335, Length=1400, Percent_Identity=59.9285714285714, Blast_Score=1682, Evalue=0.0, Organism=Caenorhabditis elegans, GI71987878, Length=935, Percent_Identity=24.8128342245989, Blast_Score=171, Evalue=2e-42, Organism=Caenorhabditis elegans, GI25145495, Length=310, Percent_Identity=31.9354838709677, Blast_Score=138, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6324690, Length=683, Percent_Identity=25.6222547584187, Blast_Score=150, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6320061, Length=551, Percent_Identity=25.2268602540835, Blast_Score=147, Evalue=9e-36, Organism=Drosophila melanogaster, GI281360912, Length=853, Percent_Identity=25.5568581477139, Blast_Score=166, Evalue=1e-40, Organism=Drosophila melanogaster, GI17530899, Length=487, Percent_Identity=26.4887063655031, Blast_Score=147, Evalue=4e-35, Organism=Drosophila melanogaster, GI17647875, Length=357, Percent_Identity=25.7703081232493, Blast_Score=101, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000722 - InterPro: IPR006592 - InterPro: IPR007080 - InterPro: IPR007066 - InterPro: IPR007083 - InterPro: IPR007081 - InterPro: IPR012754 [H]
Pfam domain/function: PF04997 RNA_pol_Rpb1_1; PF00623 RNA_pol_Rpb1_2; PF04983 RNA_pol_Rpb1_3; PF05000 RNA_pol_Rpb1_4; PF04998 RNA_pol_Rpb1_5 [H]
EC number: =2.7.7.6 [H]
Molecular weight: Translated: 155103; Mature: 155103
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA CCHHHHHHCCCCCHHHHHHHHHEEECCCHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEE RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS HHHCCCCHHHHHHHHHHHHHCCCEEHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHH LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDSFTA HHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCHHHH MIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECHHHH LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG HHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEC PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE CCEEEHHCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL CCEEECCCCCHHHHCHHHCCCEEEECCEEEEEEEEEEEECCCCCCCCEEEEECCEECCCC EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALE CEEEEEEECCCEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHH TKAVTLHAKIKGRFRTVDAEGKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKN HCEEEEEEEECCEEEEECCCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHH ISKMIDTVYRHCGQKETVIFCDRIMALGFAHACRAGISFGKDDMLIPDSKIKLVSDTEAL HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEECHHHH AKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEE MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA EECCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHCCHH DTALKTANSGYLTRRLVDVAQDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTA HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHH LDDINHPVTGDLLVKAGTLMDERDVEQIEKAGVQSVRIRSALTCEVRVGVCAVCYGRDLA HHHCCCCCCCCHHEECCCCCCHHHHHHHHHCCCHHEEHHHEEEEEEECCEEEEECCCHHH RGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV CCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCE VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTR EECCCCCEEEECCCEEEEEEECCCCCHHHEEEECCCEEEECCCHHHHHCCCCCCCCCCCC PILTEIEGRVAFEDLVDGISVQETADESTGITKREVIDWRSTPRGNDLKPAIVVQDAKGK HHHHHHCCCEEHHHHHCCCCCHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCC VGKLSKGGDARFLLSVEAILSVEPGAQVRPGDVLARIPMESAKTKDITGGLPRVAELFEA CCCCCCCCCCEEEEEEEEHEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH RRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK CCCCCCEEEEEECCCEEECCCCCCCCEEEECCCCCCCCHHHHHCCCCCEEECCCCCEEEC GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEI CCEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCEE TTQGDSTYIPGDHVDVIELEEVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQ EECCCCEECCCCCCCEEEHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCCCCCHHHHHHHH ETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMSQIRRIATSRDELIIDERRKA HHHHHHHHHHHCCCHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEECHHCC SGVEVAEPMLADMTTAAQ CCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA CCHHHHHHCCCCCHHHHHHHHHEEECCCHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEE RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS HHHCCCCHHHHHHHHHHHHHCCCEEHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHH LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDSFTA HHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCHHHH MIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECHHHH LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG HHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEC PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE CCEEEHHCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL CCEEECCCCCHHHHCHHHCCCEEEECCEEEEEEEEEEEECCCCCCCCEEEEECCEECCCC EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALE CEEEEEEECCCEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHH TKAVTLHAKIKGRFRTVDAEGKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKN HCEEEEEEEECCEEEEECCCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHH ISKMIDTVYRHCGQKETVIFCDRIMALGFAHACRAGISFGKDDMLIPDSKIKLVSDTEAL HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEECHHHH AKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEE MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA EECCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHCCHH DTALKTANSGYLTRRLVDVAQDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTA HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHH LDDINHPVTGDLLVKAGTLMDERDVEQIEKAGVQSVRIRSALTCEVRVGVCAVCYGRDLA HHHCCCCCCCCHHEECCCCCCHHHHHHHHHCCCHHEEHHHEEEEEEECCEEEEECCCHHH RGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV CCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCE VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTR EECCCCCEEEECCCEEEEEEECCCCCHHHEEEECCCEEEECCCHHHHHCCCCCCCCCCCC PILTEIEGRVAFEDLVDGISVQETADESTGITKREVIDWRSTPRGNDLKPAIVVQDAKGK HHHHHHCCCEEHHHHHCCCCCHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCC VGKLSKGGDARFLLSVEAILSVEPGAQVRPGDVLARIPMESAKTKDITGGLPRVAELFEA CCCCCCCCCCEEEEEEEEHEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH RRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK CCCCCCEEEEEECCCEEECCCCCCCCEEEECCCCCCCCHHHHHCCCCCEEECCCCCEEEC GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEI CCEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCEE TTQGDSTYIPGDHVDVIELEEVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQ EECCCCEECCCCCCCEEEHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCCCCCHHHHHHHH ETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMSQIRRIATSRDELIIDERRKA HHHHHHHHHHHCCCHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEECHHCC SGVEVAEPMLADMTTAAQ CCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA