| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ycbL [C]
Identifier: 13470505
GI number: 13470505
Start: 163117
End: 163878
Strand: Reverse
Name: ycbL [C]
Synonym: mll0231
Alternate gene names: 13470505
Gene position: 163878-163117 (Counterclockwise)
Preceding gene: 13470506
Following gene: 13470500
Centisome position: 2.33
GC content: 62.2
Gene sequence:
>762_bases ATGGGATCTCTTGCGGTCATCGACGCACCAGGCTGGTACGAGACCATCCGTATGGCCGACGGCGTCACGCTGATCCACGA GCCGTGGATCAAGCCGTTCTTCCGTTGCAACATCTGGCATGTGCGCGGCCGCGACCGCGACCTTCTGTTCGACACCGGCC TCGGCCATTTCAGCCTGCGCACACATGTGCCGCTGGTCACGGAACGCAAGCTGACCTGCGTCGCCAGCCATACGCATTTC GACCATATTGGCTGTCATCACGAATTTCCCGACCGCGGCGTGCACCCGGCGGAAGCAAAAATCCTCGCCGATCCGCGCAA CGAATGGACGGTGGCTGACCGCTATGCGACCGACGATATGTTCGATGGATTGCCGCAAGGCTGGGAGTCCTCCCGCTACC GGATCCTGCCTGCCCCGGCCGACCGCCTGCTCGACCATGGTGACGTCGTCGATCTCGGCGACCGCGCCTTCGAGGTCATA CACACACCGGGCCATTCACCCGGCGGCATCGCGCTCTACGAAAAGAAGACCGGCATACTGTTGTCCGGCGATATCATCTA TGACGGCCCGCTGATCGACGACGTCTACCATTCGGATATTCCAGACTACATGGCGACGCTGCTCGCCATGCGCGAGCTTG ACGTCTCTGTCGTGCATGGTGGCCATTTCCCGAGCTTCGGTAAGGTGCGCTATCGCCAGCTGATCGACGAGTATCTGGCG CAGAAACGCCGGGCCGGCTGCCATCTGCGGCAGCGGCCCTGA
Upstream 100 bases:
>100_bases CAGTTCATCGCCAAGCTGCCGGCGTCCGCCACCGTCCAGCCCGGCGACACGCTTGCCGTTTCGTGCGATACCGACCAGAT CATCGTTTTGGCGGACTGAA
Downstream 100 bases:
>100_bases GAACAGCTACGGCATCAGTTCAAAATGCCGCGGAAATGCCTGGTGCAGCAGGAGCAGCATGGTCTTGCGCAGCACATTGG TGTCACGGCTTGAAGGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Domain Protein; Zinc-Dependent Hydrolase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MGSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLRTHVPLVTERKLTCVASHTHF DHIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDMFDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVI HTPGHSPGGIALYEKKTGILLSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLA QKRRAGCHLRQRP
Sequences:
>Translated_253_residues MGSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLRTHVPLVTERKLTCVASHTHF DHIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDMFDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVI HTPGHSPGGIALYEKKTGILLSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLA QKRRAGCHLRQRP >Mature_252_residues GSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLRTHVPLVTERKLTCVASHTHFD HIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDMFDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVIH TPGHSPGGIALYEKKTGILLSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLAQ KRRAGCHLRQRP
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42822880, Length=260, Percent_Identity=38.0769230769231, Blast_Score=149, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28719; Mature: 28588
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLR CCCEEEEECCCHHHHHHHCCCEEEEECCCCCHHHEEEEEEECCCCCEEEEECCCCCEEEE THVPLVTERKLTCVASHTHFDHIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDM ECCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHH FDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVIHTPGHSPGGIALYEKKTGIL HCCCCCCCCCCCEEEEECCHHHHHCCCCEEECCCCEEEEEECCCCCCCCEEEEECCCCEE LSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLA EECCEEECCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHH QKRRAGCHLRQRP HHHHCCCCCCCCC >Mature Secondary Structure GSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLR CCEEEEECCCHHHHHHHCCCEEEEECCCCCHHHEEEEEEECCCCCEEEEECCCCCEEEE THVPLVTERKLTCVASHTHFDHIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDM ECCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHH FDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVIHTPGHSPGGIALYEKKTGIL HCCCCCCCCCCCEEEEECCHHHHHCCCCEEECCCCEEEEEECCCCCCCCEEEEECCCCEE LSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLA EECCEEECCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHH QKRRAGCHLRQRP HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA