Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is ycbL [C]

Identifier: 13470505

GI number: 13470505

Start: 163117

End: 163878

Strand: Reverse

Name: ycbL [C]

Synonym: mll0231

Alternate gene names: 13470505

Gene position: 163878-163117 (Counterclockwise)

Preceding gene: 13470506

Following gene: 13470500

Centisome position: 2.33

GC content: 62.2

Gene sequence:

>762_bases
ATGGGATCTCTTGCGGTCATCGACGCACCAGGCTGGTACGAGACCATCCGTATGGCCGACGGCGTCACGCTGATCCACGA
GCCGTGGATCAAGCCGTTCTTCCGTTGCAACATCTGGCATGTGCGCGGCCGCGACCGCGACCTTCTGTTCGACACCGGCC
TCGGCCATTTCAGCCTGCGCACACATGTGCCGCTGGTCACGGAACGCAAGCTGACCTGCGTCGCCAGCCATACGCATTTC
GACCATATTGGCTGTCATCACGAATTTCCCGACCGCGGCGTGCACCCGGCGGAAGCAAAAATCCTCGCCGATCCGCGCAA
CGAATGGACGGTGGCTGACCGCTATGCGACCGACGATATGTTCGATGGATTGCCGCAAGGCTGGGAGTCCTCCCGCTACC
GGATCCTGCCTGCCCCGGCCGACCGCCTGCTCGACCATGGTGACGTCGTCGATCTCGGCGACCGCGCCTTCGAGGTCATA
CACACACCGGGCCATTCACCCGGCGGCATCGCGCTCTACGAAAAGAAGACCGGCATACTGTTGTCCGGCGATATCATCTA
TGACGGCCCGCTGATCGACGACGTCTACCATTCGGATATTCCAGACTACATGGCGACGCTGCTCGCCATGCGCGAGCTTG
ACGTCTCTGTCGTGCATGGTGGCCATTTCCCGAGCTTCGGTAAGGTGCGCTATCGCCAGCTGATCGACGAGTATCTGGCG
CAGAAACGCCGGGCCGGCTGCCATCTGCGGCAGCGGCCCTGA

Upstream 100 bases:

>100_bases
CAGTTCATCGCCAAGCTGCCGGCGTCCGCCACCGTCCAGCCCGGCGACACGCTTGCCGTTTCGTGCGATACCGACCAGAT
CATCGTTTTGGCGGACTGAA

Downstream 100 bases:

>100_bases
GAACAGCTACGGCATCAGTTCAAAATGCCGCGGAAATGCCTGGTGCAGCAGGAGCAGCATGGTCTTGCGCAGCACATTGG
TGTCACGGCTTGAAGGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Domain Protein; Zinc-Dependent Hydrolase

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MGSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLRTHVPLVTERKLTCVASHTHF
DHIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDMFDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVI
HTPGHSPGGIALYEKKTGILLSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLA
QKRRAGCHLRQRP

Sequences:

>Translated_253_residues
MGSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLRTHVPLVTERKLTCVASHTHF
DHIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDMFDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVI
HTPGHSPGGIALYEKKTGILLSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLA
QKRRAGCHLRQRP
>Mature_252_residues
GSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLRTHVPLVTERKLTCVASHTHFD
HIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDMFDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVIH
TPGHSPGGIALYEKKTGILLSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLAQ
KRRAGCHLRQRP

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42822880, Length=260, Percent_Identity=38.0769230769231, Blast_Score=149, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28719; Mature: 28588

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLR
CCCEEEEECCCHHHHHHHCCCEEEEECCCCCHHHEEEEEEECCCCCEEEEECCCCCEEEE
THVPLVTERKLTCVASHTHFDHIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDM
ECCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHH
FDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVIHTPGHSPGGIALYEKKTGIL
HCCCCCCCCCCCEEEEECCHHHHHCCCCEEECCCCEEEEEECCCCCCCCEEEEECCCCEE
LSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLA
EECCEEECCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHH
QKRRAGCHLRQRP
HHHHCCCCCCCCC
>Mature Secondary Structure 
GSLAVIDAPGWYETIRMADGVTLIHEPWIKPFFRCNIWHVRGRDRDLLFDTGLGHFSLR
CCEEEEECCCHHHHHHHCCCEEEEECCCCCHHHEEEEEEECCCCCEEEEECCCCCEEEE
THVPLVTERKLTCVASHTHFDHIGCHHEFPDRGVHPAEAKILADPRNEWTVADRYATDDM
ECCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHH
FDGLPQGWESSRYRILPAPADRLLDHGDVVDLGDRAFEVIHTPGHSPGGIALYEKKTGIL
HCCCCCCCCCCCEEEEECCHHHHHCCCCEEECCCCEEEEEECCCCCCCCEEEEECCCCEE
LSGDIIYDGPLIDDVYHSDIPDYMATLLAMRELDVSVVHGGHFPSFGKVRYRQLIDEYLA
EECCEEECCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHH
QKRRAGCHLRQRP
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA