| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470469
Identifier: 13470469
GI number: 13470469
Start: 127524
End: 128195
Strand: Reverse
Name: 13470469
Synonym: mll0186
Alternate gene names: NA
Gene position: 128195-127524 (Counterclockwise)
Preceding gene: 13470472
Following gene: 13470468
Centisome position: 1.82
GC content: 60.57
Gene sequence:
>672_bases ATGGGACATCAGACGACAGAATGCGCGGAGCAGCATACCATGAACCAAAACGGATCGATCACGCTGTTCCATTATTGGAA TCGCCTGCGTGACGGACGCCCCGCTCCGAAGCGTTCGGAAGTCGAGCCGGCCGATATCAAGTCGCTTTTGGCCGACACGT TCATCCTGGAAAAGGACACACGCGGCCAACCTGTCTTCCGCCTGGCCGGCACCAGGCTTTGCGCCTGTTATGGCCGCGAA CTCAAGGGATTCTCCTTCCCGTCGCTGTGGCGCGAGAAGGATCAGCGTCTGGTCTCACGGCTGATTCACGGGGTTTTCGA CCAGAAATCGGTGGTGCTGATCAATTTCGAGGGCTTCAGCCGCAATGGCCGCTCCAACAAGTTCGAATTGCTTGCCTTGC CGCTTGACGGCGGCGTCGAGAACCCGCGTTGCCTTGGCGTGATCAGTGCCGCTGAGAAGCCGTTCTGGCTGGGCGCCGAC CCGATCACGGACGCAATGATCGATTCGATTCGTGTCATCGACCCGGAGAAAGAGATGCTCAACAACCGTCCGGCGATCGA CGTTCCCTCGCTTGTTCCAGCCGAACTCGAGGCGCCCGATACGATCTCGGCGCTTGGCCGGGCGCGCCGCATCCGCCATC TCGTCGTCTTCGACGGCGGGCGCGACGAATAG
Upstream 100 bases:
>100_bases ACCTTAACGGCCCCGACCCGTGAACAAGTGTTAACGACGCTGGCACGCTTCCTGCTCCGCAACGCATGTAGGTCATCGGA GGGCGCCCTTCTGTTCACCG
Downstream 100 bases:
>100_bases TTGATGATCGCACGGTCTCGCAGGCTCGTTTTTCCCCTTTGTTAACCCGCTTTGTTGTACTTCTGTGATGAAGTTCCTCG CATTGACGCGTGGGAATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGHQTTECAEQHTMNQNGSITLFHYWNRLRDGRPAPKRSEVEPADIKSLLADTFILEKDTRGQPVFRLAGTRLCACYGRE LKGFSFPSLWREKDQRLVSRLIHGVFDQKSVVLINFEGFSRNGRSNKFELLALPLDGGVENPRCLGVISAAEKPFWLGAD PITDAMIDSIRVIDPEKEMLNNRPAIDVPSLVPAELEAPDTISALGRARRIRHLVVFDGGRDE
Sequences:
>Translated_223_residues MGHQTTECAEQHTMNQNGSITLFHYWNRLRDGRPAPKRSEVEPADIKSLLADTFILEKDTRGQPVFRLAGTRLCACYGRE LKGFSFPSLWREKDQRLVSRLIHGVFDQKSVVLINFEGFSRNGRSNKFELLALPLDGGVENPRCLGVISAAEKPFWLGAD PITDAMIDSIRVIDPEKEMLNNRPAIDVPSLVPAELEAPDTISALGRARRIRHLVVFDGGRDE >Mature_222_residues GHQTTECAEQHTMNQNGSITLFHYWNRLRDGRPAPKRSEVEPADIKSLLADTFILEKDTRGQPVFRLAGTRLCACYGREL KGFSFPSLWREKDQRLVSRLIHGVFDQKSVVLINFEGFSRNGRSNKFELLALPLDGGVENPRCLGVISAAEKPFWLGADP ITDAMIDSIRVIDPEKEMLNNRPAIDVPSLVPAELEAPDTISALGRARRIRHLVVFDGGRDE
Specific function: Unknown
COG id: COG5388
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25038; Mature: 24907
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHQTTECAEQHTMNQNGSITLFHYWNRLRDGRPAPKRSEVEPADIKSLLADTFILEKDT CCCCHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC RGQPVFRLAGTRLCACYGRELKGFSFPSLWREKDQRLVSRLIHGVFDQKSVVLINFEGFS CCCCEEEHHHHHHEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC RNGRSNKFELLALPLDGGVENPRCLGVISAAEKPFWLGADPITDAMIDSIRVIDPEKEML CCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHEEEECCHHHHH NNRPAIDVPSLVPAELEAPDTISALGRARRIRHLVVFDGGRDE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCC >Mature Secondary Structure GHQTTECAEQHTMNQNGSITLFHYWNRLRDGRPAPKRSEVEPADIKSLLADTFILEKDT CCCHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC RGQPVFRLAGTRLCACYGRELKGFSFPSLWREKDQRLVSRLIHGVFDQKSVVLINFEGFS CCCCEEEHHHHHHEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC RNGRSNKFELLALPLDGGVENPRCLGVISAAEKPFWLGADPITDAMIDSIRVIDPEKEML CCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHEEEECCHHHHH NNRPAIDVPSLVPAELEAPDTISALGRARRIRHLVVFDGGRDE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA