| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470468
Identifier: 13470468
GI number: 13470468
Start: 126787
End: 127404
Strand: Reverse
Name: 13470468
Synonym: mll0185
Alternate gene names: NA
Gene position: 127404-126787 (Counterclockwise)
Preceding gene: 13470469
Following gene: 13470467
Centisome position: 1.81
GC content: 63.59
Gene sequence:
>618_bases ATGAGGTCAGCGGCGGTCGACTACGCGCCGTCCCAAGCTGAAAGGCGTAACTTTCAGCGCGTCCGGGTCAAGATATACGG GCGATTCATGCTGGAAGACCGCACCGAGCATCCTTGCCAGGTTGTCGACATGTCACCCGGCAATGTCGCGTTCCGCACCG ATCGCATCGGCATGCCCGGCGAAAAGGTGATCGCCTATATCGACCATATCGGCCGCATCGAAGGCGTTGTCACGCGCACG CTGCAGGACGGCTTCGCCATGACGGTGATCGCGTCCGACCGCAAGAAGGACAAGCTGGCGGCGCAGCTGACCTGGCTTGC CAACAAGCACGAACTCGACCTGCCGGAAGACCGCCGCCACGAGCGCGTCGCGCCGCGCAATCCGACCAGCGTGCTGCAGC TCACCGATGGCCGCCAATACCAGTGCCGGATCATCGACCTGTCGCTGTCCGGCGCCGCGATCGAGATCGACGTCAAGCCG GCGATAGGCGTCCAGGTCATGCTCGGCACCATGCGCGGGCAGATCGTTCGTCATTTCGAGGATGGCGTCGCCATCGAGTT CGCCGTCATCCAGCGCCCCGAAACGCTCGATTCCGAATTCAACACGCCGCGCGCCTGA
Upstream 100 bases:
>100_bases GCAGGCTCGTTTTTCCCCTTTGTTAACCCGCTTTGTTGTACTTCTGTGATGAAGTTCCTCGCATTGACGCGTGGGAATGC CAAACGGGGTGTAGGCAGTC
Downstream 100 bases:
>100_bases CCGGATCCAACGGACGCTGCAATCAAACCGGCCCTGCATGGCCGGTTTTTTATTTCCGGGCGACAGCGATCTGTCTCTTC GCAAGTGGGCGGGTTCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MRSAAVDYAPSQAERRNFQRVRVKIYGRFMLEDRTEHPCQVVDMSPGNVAFRTDRIGMPGEKVIAYIDHIGRIEGVVTRT LQDGFAMTVIASDRKKDKLAAQLTWLANKHELDLPEDRRHERVAPRNPTSVLQLTDGRQYQCRIIDLSLSGAAIEIDVKP AIGVQVMLGTMRGQIVRHFEDGVAIEFAVIQRPETLDSEFNTPRA
Sequences:
>Translated_205_residues MRSAAVDYAPSQAERRNFQRVRVKIYGRFMLEDRTEHPCQVVDMSPGNVAFRTDRIGMPGEKVIAYIDHIGRIEGVVTRT LQDGFAMTVIASDRKKDKLAAQLTWLANKHELDLPEDRRHERVAPRNPTSVLQLTDGRQYQCRIIDLSLSGAAIEIDVKP AIGVQVMLGTMRGQIVRHFEDGVAIEFAVIQRPETLDSEFNTPRA >Mature_205_residues MRSAAVDYAPSQAERRNFQRVRVKIYGRFMLEDRTEHPCQVVDMSPGNVAFRTDRIGMPGEKVIAYIDHIGRIEGVVTRT LQDGFAMTVIASDRKKDKLAAQLTWLANKHELDLPEDRRHERVAPRNPTSVLQLTDGRQYQCRIIDLSLSGAAIEIDVKP AIGVQVMLGTMRGQIVRHFEDGVAIEFAVIQRPETLDSEFNTPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23170; Mature: 23170
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAAVDYAPSQAERRNFQRVRVKIYGRFMLEDRTEHPCQVVDMSPGNVAFRTDRIGMPG CCCCCCCCCCCHHHHHHHHEEEEEEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCH EKVIAYIDHIGRIEGVVTRTLQDGFAMTVIASDRKKDKLAAQLTWLANKHELDLPEDRRH HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHEEEECCCCCCCCCCCCCC ERVAPRNPTSVLQLTDGRQYQCRIIDLSLSGAAIEIDVKPAIGVQVMLGTMRGQIVRHFE CCCCCCCCCEEEEECCCCEEEEEEEEEEECCEEEEEECCCCCCCEEEEHHHHHHHHHHHC DGVAIEFAVIQRPETLDSEFNTPRA CCEEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRSAAVDYAPSQAERRNFQRVRVKIYGRFMLEDRTEHPCQVVDMSPGNVAFRTDRIGMPG CCCCCCCCCCCHHHHHHHHEEEEEEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCH EKVIAYIDHIGRIEGVVTRTLQDGFAMTVIASDRKKDKLAAQLTWLANKHELDLPEDRRH HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHEEEECCCCCCCCCCCCCC ERVAPRNPTSVLQLTDGRQYQCRIIDLSLSGAAIEIDVKPAIGVQVMLGTMRGQIVRHFE CCCCCCCCCEEEEECCCCEEEEEEEEEEECCEEEEEECCCCCCCEEEEHHHHHHHHHHHC DGVAIEFAVIQRPETLDSEFNTPRA CCEEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA