| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470433
Identifier: 13470433
GI number: 13470433
Start: 98725
End: 99213
Strand: Reverse
Name: 13470433
Synonym: mll0140
Alternate gene names: NA
Gene position: 99213-98725 (Counterclockwise)
Preceding gene: 13470434
Following gene: 13470431
Centisome position: 1.41
GC content: 63.6
Gene sequence:
>489_bases ATGTTGACAAGGCCAACGACGCACAACCATCTGGCCGAAAGGGTCCGGCGACTCTTCGGCACCGCGCCGTGCCGTCTGCA GGTTGCCGCGCTGCCCTGGCGCGATACCGGTAATGGCGTCGAGATCATGCTGATCACCAGCCGCGACACGGGCCGCTGGG TGTTGCCGAAGGGTTGGCCAGAAGCCAAGGAGCCGCTCTGCGAGGCGGCGGCGCGAGAAGCCGGCGAGGAAGCCGGATTG CGCGGAACCGTCTCGCATCTCGAAGCCGGCCGCTACTTCTATGCCAAGGTTCTGGCTTCGGGTGAAGAAGTGCCCTGCGA GGTGCTGGTGTTTCCGCTGCACGTCGACAAGATCGCCGACCGCTGGAAGGAAAAGCACTCCCGCACCCGCAAGTGGGTGA GTTCCAGCGAAGCCGTGCGCATGATCAATGAGCCGGACCTTTGCCAGATCATCGCCTATTTCTGCGCCGACCCGCACAGA TTCTCCTAG
Upstream 100 bases:
>100_bases ATCGGCCAGGCTGATCAAAGTTTTTACTTTTATTGGTCAGAATTAGCCGTAAGATTCGTAAGGCGGCAAACGATTCTGGA GGCTGGGGCTAGCTTCTCCG
Downstream 100 bases:
>100_bases GTGACCTCCAGGGCATATTAACAACCCTGTGATGTGTCGAGCATGAAAGGTTTGCTAATCCTTCTTCGCTAAGAATCGAC CAATCTGGCGTTTGATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Nudix Hydrolase; Nudix Domain Protein; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; Hydrolase Nudix Family; Hydrolase NUDIX Family; NUDIX Family Hydrolase; MutT/NUDIX Family NTP Pyrophosphohydrolase; MutT Family NTP Pyrophosphatase; NTP Pyrophosphohydrolase Protein; NTP Pyrophosphohydrolase MutT Family; Hydrolase NUDIX Family Protein; NUDIX Domain-Containing Protein; Bis(5-Nucleosidyl)-Tetraphosphatase; NUDIX Superfamily Hydrolase; MutT/Nudix Family Phosphohydrolase; Orf_Bo; NUDIX Family Protein
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLTRPTTHNHLAERVRRLFGTAPCRLQVAALPWRDTGNGVEIMLITSRDTGRWVLPKGWPEAKEPLCEAAAREAGEEAGL RGTVSHLEAGRYFYAKVLASGEEVPCEVLVFPLHVDKIADRWKEKHSRTRKWVSSSEAVRMINEPDLCQIIAYFCADPHR FS
Sequences:
>Translated_162_residues MLTRPTTHNHLAERVRRLFGTAPCRLQVAALPWRDTGNGVEIMLITSRDTGRWVLPKGWPEAKEPLCEAAAREAGEEAGL RGTVSHLEAGRYFYAKVLASGEEVPCEVLVFPLHVDKIADRWKEKHSRTRKWVSSSEAVRMINEPDLCQIIAYFCADPHR FS >Mature_162_residues MLTRPTTHNHLAERVRRLFGTAPCRLQVAALPWRDTGNGVEIMLITSRDTGRWVLPKGWPEAKEPLCEAAAREAGEEAGL RGTVSHLEAGRYFYAKVLASGEEVPCEVLVFPLHVDKIADRWKEKHSRTRKWVSSSEAVRMINEPDLCQIIAYFCADPHR FS
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18338; Mature: 18338
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRPTTHNHLAERVRRLFGTAPCRLQVAALPWRDTGNGVEIMLITSRDTGRWVLPKGWP CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEECCCCCC EAKEPLCEAAAREAGEEAGLRGTVSHLEAGRYFYAKVLASGEEVPCEVLVFPLHVDKIAD HHHHHHHHHHHHHCHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHH RWKEKHSRTRKWVSSSEAVRMINEPDLCQIIAYFCADPHRFS HHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MLTRPTTHNHLAERVRRLFGTAPCRLQVAALPWRDTGNGVEIMLITSRDTGRWVLPKGWP CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEECCCCCC EAKEPLCEAAAREAGEEAGLRGTVSHLEAGRYFYAKVLASGEEVPCEVLVFPLHVDKIAD HHHHHHHHHHHHHCHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHH RWKEKHSRTRKWVSSSEAVRMINEPDLCQIIAYFCADPHRFS HHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA