| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470432
Identifier: 13470432
GI number: 13470432
Start: 98264
End: 98656
Strand: Direct
Name: 13470432
Synonym: mlr0138
Alternate gene names: NA
Gene position: 98264-98656 (Clockwise)
Preceding gene: 13470429
Following gene: 13470437
Centisome position: 1.4
GC content: 60.81
Gene sequence:
>393_bases GTGAGCAATCTGGTCGGCCTCGAAAAACCTGTCGGGCCGATATGCCAGATATCAGCCGTAATGCAGCTTCGGCTTCGGCT CGGTGCCGGTGAACTGCACGCCGACCCGGTCGTTGCGGCGCCAGCGGACCTCGCAGCGATAGGCGACGCCGTCGAGCGGC ACATAAAGCAGGAAACGATCGGGCACCCGCGCCTCGATCGGTATTTTCAATTCGGCGCCGCCCGCATGCTGGTTGCGCAG CGTCACGGCGATTTCCGAGTTTTGAATCCCGGTGATAACGGTTCCACCCTTGAGCACGCGTGGACGGTGCTCGCGCTCGG GCTCGCCGGTATGTTGCTGAATTGGGTCTACAGGATTCGCCATCGATCAAACGCCAGATTGGTCGATTCTTAG
Upstream 100 bases:
>100_bases TGTGTGCCACACATGTGGATAACGGGGATAGAAATGCGCCGCCGCGATTGCCGTTTCGAACGGTGGATCTGCGGCCTTTG ACCGCCGGGAGGCGTCGATC
Downstream 100 bases:
>100_bases CGAAGAAGGATTAGCAAACCTTTCATGCTCGACACATCACAGGGTTGTTAATATGCCCTGGAGGTCACCTAGGAGAATCT GTGCGGGTCGGCGCAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETIGHPRLDRYFQFGAARMLVAQ RHGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIRHRSNARLVDS
Sequences:
>Translated_130_residues MSNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETIGHPRLDRYFQFGAARMLVAQ RHGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIRHRSNARLVDS >Mature_129_residues SNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETIGHPRLDRYFQFGAARMLVAQR HGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIRHRSNARLVDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14239; Mature: 14108
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHC GHPRLDRYFQFGAARMLVAQRHGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIR CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HRSNARLVDS HCCCCCCCCC >Mature Secondary Structure SNLVGLEKPVGPICQISAVMQLRLRLGAGELHADPVVAAPADLAAIGDAVERHIKQETI CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHC GHPRLDRYFQFGAARMLVAQRHGDFRVLNPGDNGSTLEHAWTVLALGLAGMLLNWVYRIR CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HRSNARLVDS HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA