| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ygfJ [C]
Identifier: 13470396
GI number: 13470396
Start: 64231
End: 65841
Strand: Direct
Name: ygfJ [C]
Synonym: mlr0093
Alternate gene names: 13470396
Gene position: 64231-65841 (Clockwise)
Preceding gene: 13470395
Following gene: 13470397
Centisome position: 0.91
GC content: 66.73
Gene sequence:
>1611_bases GTGAAATTCGGTCCGATTGCGATTGAAGAGGCCGAAGGCGCGGTGCTGGCGCATTCCACCACCGCTGGTGAAAAGCGCTT TCGCAAGGCGCACAGGCTGAGCGCTGAAGACATCTCCGTACTCAAGCGGGCAGGCATCGTGCAGGTCGTTGCGGCCGTGC TTTCCCCCGATGATCTGGGCGAGGACGCCGCGGCGCAAAGAATTGCCGAGAGCATGAGGTTCAGCGGCATCGAGGCGAGG CCGGCCGCCACCGGCCGAGTCAATCTCCACGCCAAGGCATCAGGCATCTTCACGGTCGATGCTGCGATGATCGACGCCAT CAACGCCGTCGATCCCGCCATCACCCTTGCCACGCTGGCGCAGCATGCGCCGGTCGAAAAGGGTCAGATGGTGGCGACGG TGAAGATCATCCCCTTCGCGGTCGCCTCCACCTTGGTCGACACTGTTGTGAAAATCTGCGCCGGCGGCGAGATCCTTGCC GTCAACGCCTATCAGCCGGTGCGCGTCGGCGTCATCCAGACGGTCCTGCCGGGCATCAAACCCAGCGTGCTCGACAAGAC GCTGCGCGTCACCGAAGCGCGGCTGGCGCGTTCGGGCGGCAGGTTGACGGCGGAGCGCCGAACGCCGCATGAGATCGCAC CCGTGGCGGAGGCCGCCGCCTCGCTGGCGCGCGACAATGACCTGGTGGTGATCTTCGGCGCCTCGGCGATGAGCGATTTC GCCGATGTCGTTCCAGCGGCGATCGAGAGGGCGGGCGGAACAGTTGTCCGCGCCGGCATGCCGGTCGATCCCGGCAATCT GCTGGTGCTCGGTACACTCGGCGGCAAGCGCATCATCGGCGCGCCGGGCTGCGCCCGCAGTCCCAAGGAGAACGGCTTCG ACTGGGTCCTTGACCGTCTTGTTGCCGGCCTCGACGTCACCGCGAAGGATATCGCCGGCATGGGGGTCGGCGGGCTGCTG ATGGAAATCCCGACGCGACCGCAGCCGCGCGAACCGCTGCCGGCCAAGAGCCGGCTCAAGGTCGGCATCGTGCTTTTGGC AGCCGGCCGGTCGAGCCGCATGGGCGGGCCGAACAAACTGCTGGCGCTGTTCGACGGCAAGCCGCTGGTGCGCCGCACCG CCGAGCGCGCGCTCGGCTCGAAGGCGTCAGGCACGATCGTCGTCACCGGCCATCAGCGCGAGCGCGTACGCGCGGCTTTG TCTGGCCTCGACGTCACTTTCGCCGACAATCCCGATTTTGCCAATGGGTTGTCGACCTCGCTGAAGGCCGGCATTGCCTA TCTGCCCGAAGACACCGCCGGCGCGATGATCGTTCTGGGAGATATGCCTGGTGTTGTGTCAGGCGATCTCGACCGGCTGA TCGATGCCTTCCGCAAGGCCGGTGGCAATTCCGTCGTCCGCGCCTCGCATCAGGGCAAGCGCGGCAACCCGGTGCTCCTG CCGCGCGCGCTGTTCCCGGCCATCGCTCATCTCGAAGGCGATACCGGCGCACGCCATCTGGTCGAGGCCGAGGGGCTCGA CGTCGTCGATGTCGAGATTGGCGAGGGCGCCTCTGTCGATGTCGACACCCGTGAGGCGCTCGAAGGCGCCGGCGGCGTGC TGCAGGATTGA
Upstream 100 bases:
>100_bases ATCGGAATCGATTTTGGAGAAGCACGATGCGTAGATTCAAAGCAGCAGAGCGTCCTTTGCGCGTCCAAGTGGACGCGCGG CGCTCTGCGGGCGCGGTAGC
Downstream 100 bases:
>100_bases CAAACCCGGGCCGAATTACGCAAGCCTGCAATATGGCTTTTCGTTTCCTTTCTCCCCTCCACGGGTTTCTGGCTGCGGTA TCTGTTCTTTGCCTTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Molybdopterin Biosynthesis Protein; Formylmethanofuran Dehydrogenase Subunit E Region; Molybdenum Cofactor Cytidylyltransferase; MobA-Like Protein-Like Protein; Molybdopterin Biosynthesis; 4-Diphosphocytidyl-2C-Methyl-D-Erythritolsynthas E; Molybdenum Cofactor Biosynthesis Protein; Molybdenum Hydroxylase Accessory Protein YgfJ Family; MobA-Like Protein; Purine Catabolism Protein PucB; Molybdopterin-Guanine Dinucleotide Biosynthesis Protein A; Metal Dependent Phosphohydrolase; UDP-N-Acetylglucosamine Pyrophosphorylase; Molybdenum Cofactor Synthesis Domain Protein; Protein Family UPF; Xanthine Dehydrogenase Accessory Protein PucB; MobA-Like Molybdenum Cofactor Biosynthesis Protein; 4-Diphosphocytidyl-2c-Methyl-D-Erythritol Synthase; Molybdopterin Biosynthesis Protein MoeA; Nucleotide-Diphospho-Sugar Transferase; Transcriptional Regulator Fis Family; YgfJ Family Molybdenum Hydroxylase Accessory Protein; Nucleotidyl Transferase; Formylmethanofuran Dehydrogenase Subunit E; Molybdenum Cofactor Biosynthesis Family Protein; Conserved MobA-Related Protein; L-Seryl-TRNA(Ser) Selenium Transferase Protein; MobA-Like Protein-Like; Molybdopterin Molybdochelatase; MobA-Related Protein
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MKFGPIAIEEAEGAVLAHSTTAGEKRFRKAHRLSAEDISVLKRAGIVQVVAAVLSPDDLGEDAAAQRIAESMRFSGIEAR PAATGRVNLHAKASGIFTVDAAMIDAINAVDPAITLATLAQHAPVEKGQMVATVKIIPFAVASTLVDTVVKICAGGEILA VNAYQPVRVGVIQTVLPGIKPSVLDKTLRVTEARLARSGGRLTAERRTPHEIAPVAEAAASLARDNDLVVIFGASAMSDF ADVVPAAIERAGGTVVRAGMPVDPGNLLVLGTLGGKRIIGAPGCARSPKENGFDWVLDRLVAGLDVTAKDIAGMGVGGLL MEIPTRPQPREPLPAKSRLKVGIVLLAAGRSSRMGGPNKLLALFDGKPLVRRTAERALGSKASGTIVVTGHQRERVRAAL SGLDVTFADNPDFANGLSTSLKAGIAYLPEDTAGAMIVLGDMPGVVSGDLDRLIDAFRKAGGNSVVRASHQGKRGNPVLL PRALFPAIAHLEGDTGARHLVEAEGLDVVDVEIGEGASVDVDTREALEGAGGVLQD
Sequences:
>Translated_536_residues MKFGPIAIEEAEGAVLAHSTTAGEKRFRKAHRLSAEDISVLKRAGIVQVVAAVLSPDDLGEDAAAQRIAESMRFSGIEAR PAATGRVNLHAKASGIFTVDAAMIDAINAVDPAITLATLAQHAPVEKGQMVATVKIIPFAVASTLVDTVVKICAGGEILA VNAYQPVRVGVIQTVLPGIKPSVLDKTLRVTEARLARSGGRLTAERRTPHEIAPVAEAAASLARDNDLVVIFGASAMSDF ADVVPAAIERAGGTVVRAGMPVDPGNLLVLGTLGGKRIIGAPGCARSPKENGFDWVLDRLVAGLDVTAKDIAGMGVGGLL MEIPTRPQPREPLPAKSRLKVGIVLLAAGRSSRMGGPNKLLALFDGKPLVRRTAERALGSKASGTIVVTGHQRERVRAAL SGLDVTFADNPDFANGLSTSLKAGIAYLPEDTAGAMIVLGDMPGVVSGDLDRLIDAFRKAGGNSVVRASHQGKRGNPVLL PRALFPAIAHLEGDTGARHLVEAEGLDVVDVEIGEGASVDVDTREALEGAGGVLQD >Mature_536_residues MKFGPIAIEEAEGAVLAHSTTAGEKRFRKAHRLSAEDISVLKRAGIVQVVAAVLSPDDLGEDAAAQRIAESMRFSGIEAR PAATGRVNLHAKASGIFTVDAAMIDAINAVDPAITLATLAQHAPVEKGQMVATVKIIPFAVASTLVDTVVKICAGGEILA VNAYQPVRVGVIQTVLPGIKPSVLDKTLRVTEARLARSGGRLTAERRTPHEIAPVAEAAASLARDNDLVVIFGASAMSDF ADVVPAAIERAGGTVVRAGMPVDPGNLLVLGTLGGKRIIGAPGCARSPKENGFDWVLDRLVAGLDVTAKDIAGMGVGGLL MEIPTRPQPREPLPAKSRLKVGIVLLAAGRSSRMGGPNKLLALFDGKPLVRRTAERALGSKASGTIVVTGHQRERVRAAL SGLDVTFADNPDFANGLSTSLKAGIAYLPEDTAGAMIVLGDMPGVVSGDLDRLIDAFRKAGGNSVVRASHQGKRGNPVLL PRALFPAIAHLEGDTGARHLVEAEGLDVVDVEIGEGASVDVDTREALEGAGGVLQD
Specific function: Unknown
COG id: COG0303
COG function: function code H; Molybdopterin biosynthesis enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55483; Mature: 55483
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFGPIAIEEAEGAVLAHSTTAGEKRFRKAHRLSAEDISVLKRAGIVQVVAAVLSPDDLG CCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCC EDAAAQRIAESMRFSGIEARPAATGRVNLHAKASGIFTVDAAMIDAINAVDPAITLATLA HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHCCHHHHHHHHH QHAPVEKGQMVATVKIIPFAVASTLVDTVVKICAGGEILAVNAYQPVRVGVIQTVLPGIK HHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC PSVLDKTLRVTEARLARSGGRLTAERRTPHEIAPVAEAAASLARDNDLVVIFGASAMSDF HHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH ADVVPAAIERAGGTVVRAGMPVDPGNLLVLGTLGGKRIIGAPGCARSPKENGFDWVLDRL HHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHH VAGLDVTAKDIAGMGVGGLLMEIPTRPQPREPLPAKSRLKVGIVLLAAGRSSRMGGPNKL HHCCCCCHHHHCCCCCCHHEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEE LALFDGKPLVRRTAERALGSKASGTIVVTGHQRERVRAALSGLDVTFADNPDFANGLSTS EEEECCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCEEEECCCCCCCCCHHHH LKAGIAYLPEDTAGAMIVLGDMPGVVSGDLDRLIDAFRKAGGNSVVRASHQGKRGNPVLL HHCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEE PRALFPAIAHLEGDTGARHLVEAEGLDVVDVEIGEGASVDVDTREALEGAGGVLQD HHHHHHHHHHCCCCCCCHHEEECCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MKFGPIAIEEAEGAVLAHSTTAGEKRFRKAHRLSAEDISVLKRAGIVQVVAAVLSPDDLG CCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCC EDAAAQRIAESMRFSGIEARPAATGRVNLHAKASGIFTVDAAMIDAINAVDPAITLATLA HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHCCHHHHHHHHH QHAPVEKGQMVATVKIIPFAVASTLVDTVVKICAGGEILAVNAYQPVRVGVIQTVLPGIK HHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC PSVLDKTLRVTEARLARSGGRLTAERRTPHEIAPVAEAAASLARDNDLVVIFGASAMSDF HHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH ADVVPAAIERAGGTVVRAGMPVDPGNLLVLGTLGGKRIIGAPGCARSPKENGFDWVLDRL HHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHH VAGLDVTAKDIAGMGVGGLLMEIPTRPQPREPLPAKSRLKVGIVLLAAGRSSRMGGPNKL HHCCCCCHHHHCCCCCCHHEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEE LALFDGKPLVRRTAERALGSKASGTIVVTGHQRERVRAALSGLDVTFADNPDFANGLSTS EEEECCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCEEEECCCCCCCCCHHHH LKAGIAYLPEDTAGAMIVLGDMPGVVSGDLDRLIDAFRKAGGNSVVRASHQGKRGNPVLL HHCCEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEE PRALFPAIAHLEGDTGARHLVEAEGLDVVDVEIGEGASVDVDTREALEGAGGVLQD HHHHHHHHHHCCCCCCCHHEEECCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA