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The map label for this gene is yqeB [H]

Identifier: 13470395

GI number: 13470395

Start: 63427

End: 64164

Strand: Direct

Name: yqeB [H]

Synonym: mlr0092

Alternate gene names: 13470395

Gene position: 63427-64164 (Clockwise)

Preceding gene: 13470394

Following gene: 13470396

Centisome position: 0.9

GC content: 64.77

Gene sequence:

>738_bases
ATGGATCCATACGCCCTGAAAGCTTTGAATGCCGAGCGCCGCGCCCGCCGTGCGGCGATCCTCGTCACCGATCTCGGTGA
TGGCCGCGACCGCATCGTGCGTGAGGGCGACCAGGTCGCCGGTGATCTTGGAGCCGCGATCGCCAAGGCCTTTCGATCAG
GCAATTCCGGTTCGGTCGAGGCTGAAGGGCGGACCTTCTTTCTCAACGCGCATCTGCCGCAGCCGCGCCTCCTGGTGATC
GGCGCCGTCCATATCAGCCAGGCGCTGGCGCCGATGGCGAAAATCGCCGGCTATCCCGTCGAGATCATCGATCCGCGCAC
CGCTTTTGCCACGCCGGACCGCTTTCCCGATGTCGCTCTGCATGCCGAATGGCCGGAAGATGTGCTGAAGCGCCAGCCGC
TCGACAGCTACACCGCACTTGCCGCCGTCACTCATGACCCGAAGATCGACGATTTCGCGCTGAAGGCCGCGCTAGACGCC
AATTGCTTCTATGTCGGTGCGCTTGGCAGCCGCAAGACGCACGCCAAGCGGGTCGAGCGCCTGCTGGCGCTGGGCGCTGC
TGCCGACCAGATCGCCCGTATCCATGCGCCGATCGGGCTCGATATCGGTGCCGCGAGCCCCGCCGAGATCGCGGTAGCCA
TTCTCGCGCAGACCATCTACGCCTTCCGCTCGCGCGGCCTCGATGTCTCCGCATCGGCGCAAAGATCGGAATCGATTTTG
GAGAAGCACGATGCGTAG

Upstream 100 bases:

>100_bases
GATGCTCGAATTCGGCGTCGCCGACGAAACCGCCTGGCAGGTCGGCCTGTCCTGCGGCGGCCGCATCAAGGTGTATGTCG
AGCGGTTGGGCTGATCTCAG

Downstream 100 bases:

>100_bases
ATTCAAAGCAGCAGAGCGTCCTTTGCGCGTCCAAGTGGACGCGCGGCGCTCTGCGGGCGCGGTAGCGTGAAATTCGGTCC
GATTGCGATTGAAGAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MDPYALKALNAERRARRAAILVTDLGDGRDRIVREGDQVAGDLGAAIAKAFRSGNSGSVEAEGRTFFLNAHLPQPRLLVI
GAVHISQALAPMAKIAGYPVEIIDPRTAFATPDRFPDVALHAEWPEDVLKRQPLDSYTALAAVTHDPKIDDFALKAALDA
NCFYVGALGSRKTHAKRVERLLALGAAADQIARIHAPIGLDIGAASPAEIAVAILAQTIYAFRSRGLDVSASAQRSESIL
EKHDA

Sequences:

>Translated_245_residues
MDPYALKALNAERRARRAAILVTDLGDGRDRIVREGDQVAGDLGAAIAKAFRSGNSGSVEAEGRTFFLNAHLPQPRLLVI
GAVHISQALAPMAKIAGYPVEIIDPRTAFATPDRFPDVALHAEWPEDVLKRQPLDSYTALAAVTHDPKIDDFALKAALDA
NCFYVGALGSRKTHAKRVERLLALGAAADQIARIHAPIGLDIGAASPAEIAVAILAQTIYAFRSRGLDVSASAQRSESIL
EKHDA
>Mature_245_residues
MDPYALKALNAERRARRAAILVTDLGDGRDRIVREGDQVAGDLGAAIAKAFRSGNSGSVEAEGRTFFLNAHLPQPRLLVI
GAVHISQALAPMAKIAGYPVEIIDPRTAFATPDRFPDVALHAEWPEDVLKRQPLDSYTALAAVTHDPKIDDFALKAALDA
NCFYVGALGSRKTHAKRVERLLALGAAADQIARIHAPIGLDIGAASPAEIAVAILAQTIYAFRSRGLDVSASAQRSESIL
EKHDA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=195, Percent_Identity=30.2564102564103, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 26158; Mature: 26158

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPYALKALNAERRARRAAILVTDLGDGRDRIVREGDQVAGDLGAAIAKAFRSGNSGSVE
CCCHHHHHHCHHHHHCEEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEE
AEGRTFFLNAHLPQPRLLVIGAVHISQALAPMAKIAGYPVEIIDPRTAFATPDRFPDVAL
ECCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEE
HAEWPEDVLKRQPLDSYTALAAVTHDPKIDDFALKAALDANCFYVGALGSRKTHAKRVER
ECCCCHHHHHCCCCCHHHHEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
LLALGAAADQIARIHAPIGLDIGAASPAEIAVAILAQTIYAFRSRGLDVSASAQRSESIL
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
EKHDA
HHCCC
>Mature Secondary Structure
MDPYALKALNAERRARRAAILVTDLGDGRDRIVREGDQVAGDLGAAIAKAFRSGNSGSVE
CCCHHHHHHCHHHHHCEEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEE
AEGRTFFLNAHLPQPRLLVIGAVHISQALAPMAKIAGYPVEIIDPRTAFATPDRFPDVAL
ECCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEE
HAEWPEDVLKRQPLDSYTALAAVTHDPKIDDFALKAALDANCFYVGALGSRKTHAKRVER
ECCCCHHHHHCCCCCHHHHEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
LLALGAAADQIARIHAPIGLDIGAASPAEIAVAILAQTIYAFRSRGLDVSASAQRSESIL
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
EKHDA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]