| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470392
Identifier: 13470392
GI number: 13470392
Start: 60832
End: 61761
Strand: Direct
Name: 13470392
Synonym: mlr0088
Alternate gene names: NA
Gene position: 60832-61761 (Clockwise)
Preceding gene: 13470391
Following gene: 13470393
Centisome position: 0.86
GC content: 63.76
Gene sequence:
>930_bases ATGACCGAACTGAAACCGCGCCCCGTACCGCGGACGATCGACGAGACGCTCGATCTCCTGACCGGCGCGGACTATGTGGC GGACCGGTCGCTGGCGACCGTGCTTTTCCTGTCGTTGCGTATGAACCGGCCATTGTTCCTCGAGGGCGAGGCCGGCGTCG GCAAGACCGAGATCGCCAAGGTGCTGGCGCAGGCGCTTGGCCGCCGGCTGATCCGCTTGCAGTGCTATGAAGGGCTCGAC GTTTCGTCTGCCGTCTACGAGTGGAATTACGCCGCGCAGATGATCGAGATCCGCATGGAGGAGGCGGCCGGCAAGGTCGA CCGCTCCGCCATGGAGCGCAACGTCTTCTCGGAAAAATACCTGATCCGCCGCCCGGTGCTCGATGCGCTGACCGGCAAGA CCGGAGCGGCCCCCGTCTTCCTGATCGACGAACTCGACCGCACCGACGAAGCTTTCGAAGCCTTCCTGCTCGAAATCCTT TCCGACTACCAGGTGACGGTGCCGGAGCTCGGCACCATCAAGGCGCAAGAACCGCCGATCGTCATCATCACCACCAACCG CACCCGCGAGATCCACGACGCGTTGAAGCGGCGCTGCCTGTATCACTGGGTCGATTATCCCAATGCTGAGCGCGAATTGG AGATCGTACGCCGCAAAGTGCCGCGGGCCAACCAGCGGCTTTCGGCGGAGGTGGTCTCCTTCATCCAGAAACTGCGCCAG ATCGAACTGTTCAAGGTGCCGGGCGTCGCCGAGACCATAGATTGGGCCGGCGCGCTGACCGAACTCGACAAGGTGGCACT CGACCCGGAAACTGTGTCCGACACGATCGGCGTGCTGCTGAAATACCAGGACGACATTGCCCGCATCGGCACGGGCGAGG GCCGGCGCATCCTCGACGAGGTCAAGGCCGAGCTCGCGGCGGCGGAGTAA
Upstream 100 bases:
>100_bases TGACAGGCCTTCGCATGGGCGATAATTTGCGGCCGCTGATCTATCACGCCCGCGGCTATCATGTCCTGGACAGCGGAGCG GCGGCGTTCACGGAGAAAGA
Downstream 100 bases:
>100_bases CGCGATGAAAGCGCCGGGTGCTTACCCCAAAGAGGCCGACCCCAAGGAGGCGACGGCGGACGGACGCATCGCTGACAACA TCGTCTATTTCGCCCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; AAA_5 ATPase; AAA Family ATPase; MoxR-Like ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; ATPase Central Domain-Containing Protein; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; ATPase Protein; Aaa ATPase; ATPase Associated With Various Cellular; ATPase-Like Protein; Carbon Monoxide Dehydrogenase Accesory Protein; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; AAA ATPase Family Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; MoxR-Like ATPase CoxD; CoxD-Like Protein; ATP-Dependent Protease Subunit
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTELKPRPVPRTIDETLDLLTGADYVADRSLATVLFLSLRMNRPLFLEGEAGVGKTEIAKVLAQALGRRLIRLQCYEGLD VSSAVYEWNYAAQMIEIRMEEAAGKVDRSAMERNVFSEKYLIRRPVLDALTGKTGAAPVFLIDELDRTDEAFEAFLLEIL SDYQVTVPELGTIKAQEPPIVIITTNRTREIHDALKRRCLYHWVDYPNAERELEIVRRKVPRANQRLSAEVVSFIQKLRQ IELFKVPGVAETIDWAGALTELDKVALDPETVSDTIGVLLKYQDDIARIGTGEGRRILDEVKAELAAAE
Sequences:
>Translated_309_residues MTELKPRPVPRTIDETLDLLTGADYVADRSLATVLFLSLRMNRPLFLEGEAGVGKTEIAKVLAQALGRRLIRLQCYEGLD VSSAVYEWNYAAQMIEIRMEEAAGKVDRSAMERNVFSEKYLIRRPVLDALTGKTGAAPVFLIDELDRTDEAFEAFLLEIL SDYQVTVPELGTIKAQEPPIVIITTNRTREIHDALKRRCLYHWVDYPNAERELEIVRRKVPRANQRLSAEVVSFIQKLRQ IELFKVPGVAETIDWAGALTELDKVALDPETVSDTIGVLLKYQDDIARIGTGEGRRILDEVKAELAAAE >Mature_308_residues TELKPRPVPRTIDETLDLLTGADYVADRSLATVLFLSLRMNRPLFLEGEAGVGKTEIAKVLAQALGRRLIRLQCYEGLDV SSAVYEWNYAAQMIEIRMEEAAGKVDRSAMERNVFSEKYLIRRPVLDALTGKTGAAPVFLIDELDRTDEAFEAFLLEILS DYQVTVPELGTIKAQEPPIVIITTNRTREIHDALKRRCLYHWVDYPNAERELEIVRRKVPRANQRLSAEVVSFIQKLRQI ELFKVPGVAETIDWAGALTELDKVALDPETVSDTIGVLLKYQDDIARIGTGEGRRILDEVKAELAAAE
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34796; Mature: 34665
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELKPRPVPRTIDETLDLLTGADYVADRSLATVLFLSLRMNRPLFLEGEAGVGKTEIAK CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH VLAQALGRRLIRLQCYEGLDVSSAVYEWNYAAQMIEIRMEEAAGKVDRSAMERNVFSEKY HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH LIRRPVLDALTGKTGAAPVFLIDELDRTDEAFEAFLLEILSDYQVTVPELGTIKAQEPPI HHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCEECCCCCE VIITTNRTREIHDALKRRCLYHWVDYPNAERELEIVRRKVPRANQRLSAEVVSFIQKLRQ EEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IELFKVPGVAETIDWAGALTELDKVALDPETVSDTIGVLLKYQDDIARIGTGEGRRILDE HHHEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VKAELAAAE HHHHHHCCC >Mature Secondary Structure TELKPRPVPRTIDETLDLLTGADYVADRSLATVLFLSLRMNRPLFLEGEAGVGKTEIAK CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH VLAQALGRRLIRLQCYEGLDVSSAVYEWNYAAQMIEIRMEEAAGKVDRSAMERNVFSEKY HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH LIRRPVLDALTGKTGAAPVFLIDELDRTDEAFEAFLLEILSDYQVTVPELGTIKAQEPPI HHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCEECCCCCE VIITTNRTREIHDALKRRCLYHWVDYPNAERELEIVRRKVPRANQRLSAEVVSFIQKLRQ EEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IELFKVPGVAETIDWAGALTELDKVALDPETVSDTIGVLLKYQDDIARIGTGEGRRILDE HHHEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VKAELAAAE HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA