| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470350
Identifier: 13470350
GI number: 13470350
Start: 21462
End: 21785
Strand: Direct
Name: 13470350
Synonym: mlr0026
Alternate gene names: NA
Gene position: 21462-21785 (Clockwise)
Preceding gene: 13470348
Following gene: 13470353
Centisome position: 0.31
GC content: 64.2
Gene sequence:
>324_bases ATGGACAATGAACGCATCGCCGAACTGTTCTCAGGGCTGGGCCCGGTCAGCATCCGCAGGTTGTTCGGCGGCAAGGGCAT CTATTTCGACGGCGTCATCATCGCCATCGTGCTGCGCGGCGAGTTGCTGCTCAAGGCCGACGAGCAAAGCGCGCCCGATT TCGAGGCCGAGGGCTGCAAGCAATGGGCCTATACCGGCAAGCGCCACGGCAAGCTGGTCGCCATGCCCTATTGGAGCATT CCCGACAGCGCCTTTGACGATCCCGACGAGATGACGGTGTGGGCGCGCCGCGCCTATGAGGCAGGGCGGCGCGCAGGGAA GTGA
Upstream 100 bases:
>100_bases AGAAGCGGCATGACAAAAACTCCGATGGAATGGTCTTAACCTGTCAGCATGGTTCTGGTTGCGCGATGACAATGTCAAAT GCCGGTGACATGATCGCGGC
Downstream 100 bases:
>100_bases ACTACAGGGCCTTGGCTATCTCGGCCGCCAGCCGCGCATTGTTTTCGACCAGCGCGATATTAGTCTTGAGGCTGCGGCCG CCGGTCAACTCCAGGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: TfoX Domain Protein; TfoX-Like; TfoX N-Terminal; TfoX Protein; TfoX N-Terminal Domain Superfamily; FX Family Protein; Regulator Protein Of Competence-Specific Genes; TfoX N-Terminal Domain Protein; TfoX-Like Protein; DNA Transformation Protein; Regulator Of Competence-Specific Genes-Like Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MDNERIAELFSGLGPVSIRRLFGGKGIYFDGVIIAIVLRGELLLKADEQSAPDFEAEGCKQWAYTGKRHGKLVAMPYWSI PDSAFDDPDEMTVWARRAYEAGRRAGK
Sequences:
>Translated_107_residues MDNERIAELFSGLGPVSIRRLFGGKGIYFDGVIIAIVLRGELLLKADEQSAPDFEAEGCKQWAYTGKRHGKLVAMPYWSI PDSAFDDPDEMTVWARRAYEAGRRAGK >Mature_107_residues MDNERIAELFSGLGPVSIRRLFGGKGIYFDGVIIAIVLRGELLLKADEQSAPDFEAEGCKQWAYTGKRHGKLVAMPYWSI PDSAFDDPDEMTVWARRAYEAGRRAGK
Specific function: Unknown
COG id: COG3070
COG function: function code K; Regulator of competence-specific genes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11952; Mature: 11952
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNERIAELFSGLGPVSIRRLFGGKGIYFDGVIIAIVLRGELLLKADEQSAPDFEAEGCK CCHHHHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHCHHEEEECCCCCCCCCCHHHH QWAYTGKRHGKLVAMPYWSIPDSAFDDPDEMTVWARRAYEAGRRAGK HHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDNERIAELFSGLGPVSIRRLFGGKGIYFDGVIIAIVLRGELLLKADEQSAPDFEAEGCK CCHHHHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHCHHEEEECCCCCCCCCCHHHH QWAYTGKRHGKLVAMPYWSIPDSAFDDPDEMTVWARRAYEAGRRAGK HHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA