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The map label for this gene is recA

Identifier: 13470353

GI number: 13470353

Start: 24004

End: 25101

Strand: Direct

Name: recA

Synonym: mlr0030

Alternate gene names: 13470353

Gene position: 24004-25101 (Clockwise)

Preceding gene: 13470350

Following gene: 13470354

Centisome position: 0.34

GC content: 63.3

Gene sequence:

>1098_bases
ATGGCTCAGAATTCTTTGCGGCTTGTAGAGGATAAGGCAGTGGACAAATCAAAGGCTCTGGATGCGGCGCTGTCGCAAAT
CGAGCGGGCTTTCGGCAAGGGCTCGATCATGCGGCTCGGCGCGAACGAGCAGGTCGTCGAGATCGAAACCGTGCCGACCG
GCTCGCTCGGCCTCGACATCGCGCTCGGCGTCGGTGGCCTGCCGCGCGGCCGCATCATCGAGATCTACGGACCGGAAAGC
TCGGGCAAGACGACGCTGGCCCTCCACACGGTGGCCGAAGCCCAGAAGAAGGGCGGCATCTGCGCCTTCGTCGACGCCGA
ACACGCGCTCGATCCGGTCTATGCCCGCAAGCTCGGCGTCGACCTTGAAAACCTGCTGATCTCGCAGCCCGATACCGGCG
AGCAGGCGCTGGAGATCTGCGACACGCTGGTGCGTTCCGGCGCCATCGACGTGCTGGTGGTCGATTCGGTCGCGGCACTG
ACGCCGCGCGCCGAAATCGAGGGCGAGATGGGCGATTCGCTGCCCGGCCTGCAGGCTCGACTGATGAGCCAGGCGCTGCG
CAAGCTGACCGCCTCGATCTCGCGCTCCAACACCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGT
TCGGTTCGCCCGAGACCACGACCGGCGGCAATGCGCTGAAATTCTATGCGTCGGTGCGCCTCGATATCCGCCGCATCGGC
TCGGTCAAGGACCGCGACGAGGTCGTTGGCAACCAGACCCGCGTCAAGGTGGTCAAGAACAAGCTGGCGCCGCCCTTCAA
GGTGGTCGAGTTCGACATCATGTATGGCGAGGGCGTGTCCAAGACCGGCGAACTGGTCGACCTCGGCGTCAAGGCCGGCG
TGGTTGAGAAATCGGGCGCCTGGTTCTCCTACAATTCGCAACGTCTCGGCCAGGGGCGCGAAAATGCAAAGCTGTTCCTG
CGCGACAATCCCGATACCGCACGCGAGATCGAACTGGCGCTCAGGCAGAATGCCGGGCTGATCGCCGAAAAATTCCTCGA
GAATGGCGGCTCTGAAGGCGGCGACGACGGTTTTGAGGACGAAGCCGGCGCAATGTAG

Upstream 100 bases:

>100_bases
AGATATTTGATCCCTCTTGCCAAACGAGAACAAAAAAGGTACAAAATGACAGGGATTACGGATTGTCCGGCCTTCATTGA
CGACCAAGGGGTGATGTATC

Downstream 100 bases:

>100_bases
GCCGCGGACAGAGTTCGGCCATAAAGTCGGTCTATGACCTGATGCTTAAGTAATCGAGTTCTTTAGTACCGCGTCCAAAA
CCGCCGGCCTTCGCGCCGGC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MAQNSLRLVEDKAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEIYGPES
SGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAAL
TPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
SVKDRDEVVGNQTRVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKLFL
RDNPDTAREIELALRQNAGLIAEKFLENGGSEGGDDGFEDEAGAM

Sequences:

>Translated_365_residues
MAQNSLRLVEDKAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEIYGPES
SGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAAL
TPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
SVKDRDEVVGNQTRVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKLFL
RDNPDTAREIELALRQNAGLIAEKFLENGGSEGGDDGFEDEAGAM
>Mature_364_residues
AQNSLRLVEDKAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEIYGPESS
GKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALT
PRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGS
VKDRDEVVGNQTRVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKLFLR
DNPDTAREIELALRQNAGLIAEKFLENGGSEGGDDGFEDEAGAM

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=322, Percent_Identity=70.8074534161491, Blast_Score=482, Evalue=1e-137,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_RHILO (Q98NQ6)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_101919.1
- ProteinModelPortal:   Q98NQ6
- SMR:   Q98NQ6
- GeneID:   1224582
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr0030
- NMPDR:   fig|266835.1.peg.24
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 39062; Mature: 38931

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNSLRLVEDKAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDI
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCEEE
ALGVGGLPRGRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCEEEEECCHHHCCHHHHHHHCC
DLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQAR
CHHHHEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHH
LMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEHHHHC
SVKDRDEVVGNQTRVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGA
CCCCHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEECCCC
WFSYNSQRLGQGRENAKLFLRDNPDTAREIELALRQNAGLIAEKFLENGGSEGGDDGFED
EEEECCHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
EAGAM
CCCCC
>Mature Secondary Structure 
AQNSLRLVEDKAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDI
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCEEE
ALGVGGLPRGRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCEEEEECCHHHCCHHHHHHHCC
DLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQAR
CHHHHEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHH
LMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEHHHHC
SVKDRDEVVGNQTRVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGA
CCCCHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEECCCC
WFSYNSQRLGQGRENAKLFLRDNPDTAREIELALRQNAGLIAEKFLENGGSEGGDDGFED
EEEECCHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
EAGAM
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968