Click here to switch to the map view.

The map label for this gene is 13470331

Identifier: 13470331

GI number: 13470331

Start: 287

End: 1084

Strand: Direct

Name: 13470331

Synonym: mlr0002

Alternate gene names: NA

Gene position: 287-1084 (Clockwise)

Preceding gene: NA

Following gene: 13470332

Centisome position: 0.0

GC content: 56.89

Gene sequence:

>798_bases
ATGTTCTGGGTCACGAAAAAGGCCCTGATGCCTTTCCTGATGCTGCCGGCCGGAATAATCTTCGTCTCGGCGGTGGGCTA
CGCAATCAACTGGCTGTTTTCGACACTCTTCCAGTTCCAGCCACCGCTGGTCGAGGGACCGGCGGGGCCAGTGACGGTGC
TGATCTTCACCATCACCATGCTGCTCGCCTACGATATTTCCTATTATCTCTATCACGTCGCCCAGCATCGCTATCCCCTG
CTTTGGGAACTGCACAAGGTGCATCACTCGGCCGAGGTGATGGTCGGGATCACCAAGGACCGGGTTCACCCGCTCGACGA
GCTGATGAATCGAGCCTGGGATGGCCTCATCGTCGGCATCTGCTTCGGCATCTGGTCGCTGATTTCGCTGAACCTTGTCG
AACTGACCGTCTTTGGCGTCAACGTCTATGTCATGCGCAACATCCTGATGATGGATTTCGTCAGGCACACGCATTTCAAG
ATTTCGTTCGGCCCGCTCAACAATGTGATCCTGTGTCCGCATTGGCACCAGCTGCATCACAGCACCGATCCGCGCCACTA
TGACAAGAATTTCGGCCTGCTCTTCTCGTTCTGGGATCGACTCTTCGGAACATTGTGCGTGCCGAAACCTGACGAGGACT
TCAAGTTCGGACTGGTCGACCGCAATGTCCGCGACTACCAGTCCCTCGCGGGCCTTTATGTGATGCCGCTGAAGCGGATG
TGGGGGCATATTGCCAGGCGCATCCGGCCTGCAAAGTCACGGACCGTACAGTCATCGGAAGAAGGGACGCGGCCATGA

Upstream 100 bases:

>100_bases
CGCCTATTGGCGCACCGTCGAGGCGAAGAGCTGGAAGGAGTTCTTCGAGTTCGTCGTCCCGCACGAGGTCATCACCCATC
CCTCGGCGAAGGCCGACCTG

Downstream 100 bases:

>100_bases
ACGCTCCCTTCGTGCTGGCGATTCCGCGGACACGCACCTTCGAAGTCGTGACATCTGCGGCGCGCCTGGCCGAGATCGCA
CCGGCCTGGACCGCGCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase Family Protein; Transmembrane Protein; Sterol Desaturase-Related Protein; C-5 Sterol Desaturase; Sterol Desaturase-Like; Sterol Desaturase-Like Protein; Transmembrane Fatty Acid Synthesis Protein; Sterol Desaturase Transmembrane Protein; Creatininase Subfamily; Sterol Desaturase Protein

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MFWVTKKALMPFLMLPAGIIFVSAVGYAINWLFSTLFQFQPPLVEGPAGPVTVLIFTITMLLAYDISYYLYHVAQHRYPL
LWELHKVHHSAEVMVGITKDRVHPLDELMNRAWDGLIVGICFGIWSLISLNLVELTVFGVNVYVMRNILMMDFVRHTHFK
ISFGPLNNVILCPHWHQLHHSTDPRHYDKNFGLLFSFWDRLFGTLCVPKPDEDFKFGLVDRNVRDYQSLAGLYVMPLKRM
WGHIARRIRPAKSRTVQSSEEGTRP

Sequences:

>Translated_265_residues
MFWVTKKALMPFLMLPAGIIFVSAVGYAINWLFSTLFQFQPPLVEGPAGPVTVLIFTITMLLAYDISYYLYHVAQHRYPL
LWELHKVHHSAEVMVGITKDRVHPLDELMNRAWDGLIVGICFGIWSLISLNLVELTVFGVNVYVMRNILMMDFVRHTHFK
ISFGPLNNVILCPHWHQLHHSTDPRHYDKNFGLLFSFWDRLFGTLCVPKPDEDFKFGLVDRNVRDYQSLAGLYVMPLKRM
WGHIARRIRPAKSRTVQSSEEGTRP
>Mature_265_residues
MFWVTKKALMPFLMLPAGIIFVSAVGYAINWLFSTLFQFQPPLVEGPAGPVTVLIFTITMLLAYDISYYLYHVAQHRYPL
LWELHKVHHSAEVMVGITKDRVHPLDELMNRAWDGLIVGICFGIWSLISLNLVELTVFGVNVYVMRNILMMDFVRHTHFK
ISFGPLNNVILCPHWHQLHHSTDPRHYDKNFGLLFSFWDRLFGTLCVPKPDEDFKFGLVDRNVRDYQSLAGLYVMPLKRM
WGHIARRIRPAKSRTVQSSEEGTRP

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI25144659, Length=162, Percent_Identity=30.8641975308642, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30772; Mature: 30772

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWVTKKALMPFLMLPAGIIFVSAVGYAINWLFSTLFQFQPPLVEGPAGPVTVLIFTITM
CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LLAYDISYYLYHVAQHRYPLLWELHKVHHSAEVMVGITKDRVHPLDELMNRAWDGLIVGI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHH
CFGIWSLISLNLVELTVFGVNVYVMRNILMMDFVRHTHFKISFGPLNNVILCPHWHQLHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEECCCHHHHCC
STDPRHYDKNFGLLFSFWDRLFGTLCVPKPDEDFKFGLVDRNVRDYQSLAGLYVMPLKRM
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
WGHIARRIRPAKSRTVQSSEEGTRP
HHHHHHHHCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFWVTKKALMPFLMLPAGIIFVSAVGYAINWLFSTLFQFQPPLVEGPAGPVTVLIFTITM
CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LLAYDISYYLYHVAQHRYPLLWELHKVHHSAEVMVGITKDRVHPLDELMNRAWDGLIVGI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHH
CFGIWSLISLNLVELTVFGVNVYVMRNILMMDFVRHTHFKISFGPLNNVILCPHWHQLHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEECCCHHHHCC
STDPRHYDKNFGLLFSFWDRLFGTLCVPKPDEDFKFGLVDRNVRDYQSLAGLYVMPLKRM
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
WGHIARRIRPAKSRTVQSSEEGTRP
HHHHHHHHCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA