| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470332
Identifier: 13470332
GI number: 13470332
Start: 1006
End: 2223
Strand: Direct
Name: 13470332
Synonym: mlr0003
Alternate gene names: NA
Gene position: 1006-2223 (Clockwise)
Preceding gene: 13470331
Following gene: 13470334
Centisome position: 0.01
GC content: 65.44
Gene sequence:
>1218_bases GTGGGGGCATATTGCCAGGCGCATCCGGCCTGCAAAGTCACGGACCGTACAGTCATCGGAAGAAGGGACGCGGCCATGAA CGCTCCCTTCGTGCTGGCGATTCCGCGGACACGCACCTTCGAAGTCGTGACATCTGCGGCGCGCCTGGCCGAGATCGCAC CGGCCTGGACCGCGCTCTGGCAGCGAGCGGGCGGGCTTGTCTTCCAGCACCCGGACTGGATCGCGGCCTGGTGGCGCACC ACCCCGCATCAGGAGCGGCGCACGCTCAGGATCGGGCTTGCTTGGAATGGCGATCGGCTCGATGGCGTGATCGCGCTCGC CACTTTCAGGCGCTCCGGCATCCGCATGCTCGAATGGGCGGCGAAGGATCACAGCGACTATGGCGACGCGCTGGTTGCGC CCGATAGCGATCCGCAGGTGATCTCCCGTCTCTGGCAGCATGTTTTTGATCAGGGCGGCTTCGACCTGGCCTATCTCAAC CGCCTGCTGCCGGATGCCGGGGTCCGGGCCCTGCTGGATCCGGCCTCGCGCCATGCCAGGGCGCTTCGGCCCAACCACCG CAGTGAAATCAGCTATCGTGTCGTCGGTCCCTGGCAAAGTGGGGCGGAATGGTTCGAGACGCTGTCCAAGAAGGCCCGGC AGAACTACCGTCGCGGCCGCAAATTCATGGAGGAAGGCGGTGCGGTGCGTTTCCGCCTGCTGGGTGCGGACGACCCGCGC GAGCCGGTGCTCGCACGGGTCGCGGTGCTGAAGCGCCTCTGGCTTGCCCGGCATGGCCGCGTCTCGGACCTGTTCGACAA GGGCTCGCCGGTTCTCGCCGCGCTGGTTTCGGTGCTGGCCGAACTCGGGCTGTTGCGCATCTTCGTGTTGGAACTCGACG ACACGATCATCGCCGTCTCGATCAATTTCGAGCAGCACGGCACGATGATGGCTTTCGTCACCACCTATGATCCCGAATAT GAGCGCGCCTCGCCGGGCATGGTGCTGATGATGGACTATATCCAGTGGTCGCTCGACCGTGGCCTCGCCAAAGTCGATTT TCTCTGCGGCGGCGAGGATTTCAAGCGGCGCTTCGCCACGCAATCAGTCAGGCTGTCGTCGATGATCGGCGCGCGCGGTC TGCGCGGCCATCTCGCCGCGCTTGCCGATCGTGCCGTCCATGTCACGAAATCCTCGCGGGCACAGCGGCAGCCGAACGCG CAAACGCCCGACGAGTAA
Upstream 100 bases:
>100_bases TGCCGAAACCTGACGAGGACTTCAAGTTCGGACTGGTCGACCGCAATGTCCGCGACTACCAGTCCCTCGCGGGCCTTTAT GTGATGCCGCTGAAGCGGAT
Downstream 100 bases:
>100_bases GGACGGCTCGTATGGGCCCTAGCCCACGCTCAAAGCGCGCGAACGGCTTCCAGCACGTCCTCGGCATGGCCCTTGACCCG GACCTTGCGCCAAATCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MGAYCQAHPACKVTDRTVIGRRDAAMNAPFVLAIPRTRTFEVVTSAARLAEIAPAWTALWQRAGGLVFQHPDWIAAWWRT TPHQERRTLRIGLAWNGDRLDGVIALATFRRSGIRMLEWAAKDHSDYGDALVAPDSDPQVISRLWQHVFDQGGFDLAYLN RLLPDAGVRALLDPASRHARALRPNHRSEISYRVVGPWQSGAEWFETLSKKARQNYRRGRKFMEEGGAVRFRLLGADDPR EPVLARVAVLKRLWLARHGRVSDLFDKGSPVLAALVSVLAELGLLRIFVLELDDTIIAVSINFEQHGTMMAFVTTYDPEY ERASPGMVLMMDYIQWSLDRGLAKVDFLCGGEDFKRRFATQSVRLSSMIGARGLRGHLAALADRAVHVTKSSRAQRQPNA QTPDE
Sequences:
>Translated_405_residues MGAYCQAHPACKVTDRTVIGRRDAAMNAPFVLAIPRTRTFEVVTSAARLAEIAPAWTALWQRAGGLVFQHPDWIAAWWRT TPHQERRTLRIGLAWNGDRLDGVIALATFRRSGIRMLEWAAKDHSDYGDALVAPDSDPQVISRLWQHVFDQGGFDLAYLN RLLPDAGVRALLDPASRHARALRPNHRSEISYRVVGPWQSGAEWFETLSKKARQNYRRGRKFMEEGGAVRFRLLGADDPR EPVLARVAVLKRLWLARHGRVSDLFDKGSPVLAALVSVLAELGLLRIFVLELDDTIIAVSINFEQHGTMMAFVTTYDPEY ERASPGMVLMMDYIQWSLDRGLAKVDFLCGGEDFKRRFATQSVRLSSMIGARGLRGHLAALADRAVHVTKSSRAQRQPNA QTPDE >Mature_404_residues GAYCQAHPACKVTDRTVIGRRDAAMNAPFVLAIPRTRTFEVVTSAARLAEIAPAWTALWQRAGGLVFQHPDWIAAWWRTT PHQERRTLRIGLAWNGDRLDGVIALATFRRSGIRMLEWAAKDHSDYGDALVAPDSDPQVISRLWQHVFDQGGFDLAYLNR LLPDAGVRALLDPASRHARALRPNHRSEISYRVVGPWQSGAEWFETLSKKARQNYRRGRKFMEEGGAVRFRLLGADDPRE PVLARVAVLKRLWLARHGRVSDLFDKGSPVLAALVSVLAELGLLRIFVLELDDTIIAVSINFEQHGTMMAFVTTYDPEYE RASPGMVLMMDYIQWSLDRGLAKVDFLCGGEDFKRRFATQSVRLSSMIGARGLRGHLAALADRAVHVTKSSRAQRQPNAQ TPDE
Specific function: Unknown
COG id: COG5653
COG function: function code M; Protein involved in cellulose biosynthesis (CelD)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45475; Mature: 45343
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAYCQAHPACKVTDRTVIGRRDAAMNAPFVLAIPRTRTFEVVTSAARLAEIAPAWTALW CCCCCCCCCCCEECCCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH QRAGGLVFQHPDWIAAWWRTTPHQERRTLRIGLAWNGDRLDGVIALATFRRSGIRMLEWA HHHCCCEEECCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHH AKDHSDYGDALVAPDSDPQVISRLWQHVFDQGGFDLAYLNRLLPDAGVRALLDPASRHAR HHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCHHHHHHH ALRPNHRSEISYRVVGPWQSGAEWFETLSKKARQNYRRGRKFMEEGGAVRFRLLGADDPR HCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC EPVLARVAVLKRLWLARHGRVSDLFDKGSPVLAALVSVLAELGLLRIFVLELDDTIIAVS HHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEECCEEEEEE INFEQHGTMMAFVTTYDPEYERASPGMVLMMDYIQWSLDRGLAKVDFLCGGEDFKRRFAT EEECCCCCEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEEECCHHHHHHHHH QSVRLSSMIGARGLRGHLAALADRAVHVTKSSRAQRQPNAQTPDE HHHHHHHHHCCCCHHHHHHHHHHHHHEECCHHHHHCCCCCCCCCC >Mature Secondary Structure GAYCQAHPACKVTDRTVIGRRDAAMNAPFVLAIPRTRTFEVVTSAARLAEIAPAWTALW CCCCCCCCCCEECCCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH QRAGGLVFQHPDWIAAWWRTTPHQERRTLRIGLAWNGDRLDGVIALATFRRSGIRMLEWA HHHCCCEEECCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHH AKDHSDYGDALVAPDSDPQVISRLWQHVFDQGGFDLAYLNRLLPDAGVRALLDPASRHAR HHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCHHHHHHH ALRPNHRSEISYRVVGPWQSGAEWFETLSKKARQNYRRGRKFMEEGGAVRFRLLGADDPR HCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC EPVLARVAVLKRLWLARHGRVSDLFDKGSPVLAALVSVLAELGLLRIFVLELDDTIIAVS HHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEECCEEEEEE INFEQHGTMMAFVTTYDPEYERASPGMVLMMDYIQWSLDRGLAKVDFLCGGEDFKRRFAT EEECCCCCEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEEECCHHHHHHHHH QSVRLSSMIGARGLRGHLAALADRAVHVTKSSRAQRQPNAQTPDE HHHHHHHHHCCCCHHHHHHHHHHHHHEECCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA