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The map label for this gene is rlpA [C]

Identifier: 15603791

GI number: 15603791

Start: 2165742

End: 2166626

Strand: Direct

Name: rlpA [C]

Synonym: PM1926

Alternate gene names: 15603791

Gene position: 2165742-2166626 (Clockwise)

Preceding gene: 15603790

Following gene: 15603792

Centisome position: 95.94

GC content: 38.64

Gene sequence:

>885_bases
ATGAAACAAAAAATTTTTCAAATATTGACCGCACTTTGTTGCATATTCTATGTGATGAGTGCTCAAGCAATAGATGCAAA
GAAGCTTTATGGTTTACAAGGCCCGAAGTTGATCTATCAAGCACCCGTAACCAAATCACATCATTATGTGGTGAAAGGGG
TGAGTTATCGCACACAAACGTCCAAAGAGGCCAGTGGCTATGCGAGAGATGGTATTGCCAGCTTTTACCATAAAAAATTT
AATGGACGAAAAACGGCGAGTGGTCAAATTTACAACGAAAATTTATATACGGCTGCGCATAAAACGCTCCCCTTGAACAG
CTATGTGTTGGTTACGAATTTACGTAATCAACGTAAAGTGATCGTGCGTATTAATGACCGAGGACCTTTTGTAAAAGGTC
GAATTATTGATTTATCACGTGCTGCAGCGCGAGAAATCGGCTTAATTGGTAGTGGTGTTGGTCATGTGCGTGTGGAACTG
ATACAGTTAGATAGACAAGGGCGAATTTCAGGCGCAGCCAGTGCGACGTTGGCAAAATTAGCCAAGAACCAAGAGGCAGT
CAATATGTTACTGCAAGGAGAGGATACGGTCGAATTAACACAACATACTGAAGAAAAAACAGTAAAAGCAGCGACCACTA
AGCCTGAAAAATATACAACGGTTTATAAAATCCGTATACTTAATTTAGATTCAAAAAAACAAGCTGAAAAATTAATTAGT
AAATTGGGACGTGAGGATATTCGTGCGGACATCACAGTAAATCAGGATAAATTTGATATTTACTTTGGACCGTTTAGCGA
TAAATCTCAAGTCAATGACGTCAAAGCACAATTAAGAAAATTGAATTACTCGAAACCATTAATTGTGTACACCTTTGACG
ATTAA

Upstream 100 bases:

>100_bases
ATTATGTCCATTCATACCCATAAAGAACATTTTTTAAAGGGAACTAATTAAACGATTTATTATCTTAGATAGTGATTCTT
AATAATTGAACTGAACGATG

Downstream 100 bases:

>100_bases
CCTTATTTAAGATGGATACGGAGAGTATGTTTAAAACAGTTGTAACGAAAAGTAAAATCGCATTGATAACGGGCTTATGT
ATTGCCCCAAGTTTGTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKQKIFQILTALCCIFYVMSAQAIDAKKLYGLQGPKLIYQAPVTKSHHYVVKGVSYRTQTSKEASGYARDGIASFYHKKF
NGRKTASGQIYNENLYTAAHKTLPLNSYVLVTNLRNQRKVIVRINDRGPFVKGRIIDLSRAAAREIGLIGSGVGHVRVEL
IQLDRQGRISGAASATLAKLAKNQEAVNMLLQGEDTVELTQHTEEKTVKAATTKPEKYTTVYKIRILNLDSKKQAEKLIS
KLGREDIRADITVNQDKFDIYFGPFSDKSQVNDVKAQLRKLNYSKPLIVYTFDD

Sequences:

>Translated_294_residues
MKQKIFQILTALCCIFYVMSAQAIDAKKLYGLQGPKLIYQAPVTKSHHYVVKGVSYRTQTSKEASGYARDGIASFYHKKF
NGRKTASGQIYNENLYTAAHKTLPLNSYVLVTNLRNQRKVIVRINDRGPFVKGRIIDLSRAAAREIGLIGSGVGHVRVEL
IQLDRQGRISGAASATLAKLAKNQEAVNMLLQGEDTVELTQHTEEKTVKAATTKPEKYTTVYKIRILNLDSKKQAEKLIS
KLGREDIRADITVNQDKFDIYFGPFSDKSQVNDVKAQLRKLNYSKPLIVYTFDD
>Mature_294_residues
MKQKIFQILTALCCIFYVMSAQAIDAKKLYGLQGPKLIYQAPVTKSHHYVVKGVSYRTQTSKEASGYARDGIASFYHKKF
NGRKTASGQIYNENLYTAAHKTLPLNSYVLVTNLRNQRKVIVRINDRGPFVKGRIIDLSRAAAREIGLIGSGVGHVRVEL
IQLDRQGRISGAASATLAKLAKNQEAVNMLLQGEDTVELTQHTEEKTVKAATTKPEKYTTVYKIRILNLDSKKQAEKLIS
KLGREDIRADITVNQDKFDIYFGPFSDKSQVNDVKAQLRKLNYSKPLIVYTFDD

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family

Homologues:

Organism=Escherichia coli, GI1786852, Length=138, Percent_Identity=39.1304347826087, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLPA_PASMU (Q9CJR6)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246865.1
- PRIDE:   Q9CJR6
- GeneID:   1245273
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1926
- NMPDR:   fig|272843.1.peg.1927
- HOGENOM:   HBG495102
- OMA:   NIQTEVN
- ProtClustDB:   CLSK789914
- BioCyc:   PMUL272843:PM1926-MONOMER
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730
- Gene3D:   G3DSA:3.30.70.1070
- TIGRFAMs:   TIGR00413

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR; SSF50685 Barwin_like; SSF110997 Spore_cell-division_bac

EC number: NA

Molecular weight: Translated: 33050; Mature: 33050

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKIFQILTALCCIFYVMSAQAIDAKKLYGLQGPKLIYQAPVTKSHHYVVKGVSYRTQT
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCCCCCCEEEEEECEECCCC
SKEASGYARDGIASFYHKKFNGRKTASGQIYNENLYTAAHKTLPLNSYVLVTNLRNQRKV
CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEHHCCCCCCCEEEEEECCCCEEE
IVRINDRGPFVKGRIIDLSRAAAREIGLIGSGVGHVRVELIQLDRQGRISGAASATLAKL
EEEECCCCCEEEEEEEEHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
AKNQEAVNMLLQGEDTVELTQHTEEKTVKAATTKPEKYTTVYKIRILNLDSKKQAEKLIS
HCCHHHHHHHHCCCCCEEHHHCCHHHHEEHCCCCCCCEEEEEEEEEEECCCHHHHHHHHH
KLGREDIRADITVNQDKFDIYFGPFSDKSQVNDVKAQLRKLNYSKPLIVYTFDD
HHCHHHCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MKQKIFQILTALCCIFYVMSAQAIDAKKLYGLQGPKLIYQAPVTKSHHYVVKGVSYRTQT
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCCCCCCEEEEEECEECCCC
SKEASGYARDGIASFYHKKFNGRKTASGQIYNENLYTAAHKTLPLNSYVLVTNLRNQRKV
CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEHHCCCCCCCEEEEEECCCCEEE
IVRINDRGPFVKGRIIDLSRAAAREIGLIGSGVGHVRVELIQLDRQGRISGAASATLAKL
EEEECCCCCEEEEEEEEHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
AKNQEAVNMLLQGEDTVELTQHTEEKTVKAATTKPEKYTTVYKIRILNLDSKKQAEKLIS
HCCHHHHHHHHCCCCCEEHHHCCHHHHEEHCCCCCCCEEEEEEEEEEECCCHHHHHHHHH
KLGREDIRADITVNQDKFDIYFGPFSDKSQVNDVKAQLRKLNYSKPLIVYTFDD
HHCHHHCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100