Click here to switch to the map view.

The map label for this gene is ygfY [C]

Identifier: 15603655

GI number: 15603655

Start: 2013754

End: 2014008

Strand: Reverse

Name: ygfY [C]

Synonym: PM1790

Alternate gene names: 15603655

Gene position: 2014008-2013754 (Counterclockwise)

Preceding gene: 15603660

Following gene: 15603654

Centisome position: 89.21

GC content: 37.25

Gene sequence:

>255_bases
ATGACCCAATACAACAAACTGAGAATTGAATGGGATTGTCGGCGAGGAATGCTCGAACTGGATAACGTCATTATGCCATT
TTATCGACAGCACTTTGACGCCTTATCTGACACACAAAAAGACACCTTTATTCGTTTATTAGCGTGTAGCGATTTACAGC
TTTTTTCTTGGTTCTTTAATCGAGGTATGGCAACTGATCCTCAATTACAACAAATGGTTGATTACATTCAAAAAACATTG
AAACTCACAGATTAA

Upstream 100 bases:

>100_bases
AAGTCCTCTTTTCGCGCCAACAGGCAAAAAGAGTAACTGAGTTTATTTTCCTGTCTTTCCTTGCTATATTTACGCAGTTT
ACATCTTCTAAGGATATCAA

Downstream 100 bases:

>100_bases
TTTGTCTTTACAAAAAAGATTGAACTTTTTTTATTCGGCACCGTCTAACTGTTTGCAAGAGCTTGCTGTCTTTGAATATT
AAGGCTTGTTAGAGGTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MTQYNKLRIEWDCRRGMLELDNVIMPFYRQHFDALSDTQKDTFIRLLACSDLQLFSWFFNRGMATDPQLQQMVDYIQKTL
KLTD

Sequences:

>Translated_84_residues
MTQYNKLRIEWDCRRGMLELDNVIMPFYRQHFDALSDTQKDTFIRLLACSDLQLFSWFFNRGMATDPQLQQMVDYIQKTL
KLTD
>Mature_83_residues
TQYNKLRIEWDCRRGMLELDNVIMPFYRQHFDALSDTQKDTFIRLLACSDLQLFSWFFNRGMATDPQLQQMVDYIQKTLK
LTD

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0350 family

Homologues:

Organism=Escherichia coli, GI1789264, Length=73, Percent_Identity=54.7945205479452, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1790_PASMU (Q9CK44)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246729.1
- ProteinModelPortal:   Q9CK44
- SMR:   Q9CK44
- GeneID:   1245137
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1790
- NMPDR:   fig|272843.1.peg.1791
- HOGENOM:   HBG730588
- OMA:   KLRIEWD
- ProtClustDB:   CLSK870616
- BioCyc:   PMUL272843:PM1790-MONOMER
- InterPro:   IPR005631
- Gene3D:   G3DSA:1.10.150.250

Pfam domain/function: PF03937 DUF339; SSF109910 DUF339

EC number: NA

Molecular weight: Translated: 10159; Mature: 10028

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQYNKLRIEWDCRRGMLELDNVIMPFYRQHFDALSDTQKDTFIRLLACSDLQLFSWFFN
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
RGMATDPQLQQMVDYIQKTLKLTD
CCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQYNKLRIEWDCRRGMLELDNVIMPFYRQHFDALSDTQKDTFIRLLACSDLQLFSWFFN
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
RGMATDPQLQQMVDYIQKTLKLTD
CCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100