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The map label for this gene is ycjO [H]

Identifier: 15603626

GI number: 15603626

Start: 1984320

End: 1985204

Strand: Reverse

Name: ycjO [H]

Synonym: PM1761

Alternate gene names: 15603626

Gene position: 1985204-1984320 (Counterclockwise)

Preceding gene: 15603627

Following gene: 15603625

Centisome position: 87.94

GC content: 37.4

Gene sequence:

>885_bases
ATGTATTACAAACATCATAACTATACAAGATGGATATTTGTTTTACCGGCAATATTAGTCGTATCCGTACTATTCATTTA
TCCATTTTTATCTAGTATTTTTTATAGTTTTACCAACAAAAACTTGATCATGCCGCATTACAGTTTTGTAGGCCTAGCGA
ACTATCGAGCTGTATTATCCGATCCAAATTTCTGGATGTCATTTTTCAATTCTCTAAAATGGACAATTTTTTCTTTAACA
GGTCAAGTATTAGTGGGTTTCTTTCTCGCGCTTGCGTTAAATCGAGTTAAACATTTTAAATGGCTTTATAAAATTTTATT
AATTATCCCTTGGGCCTTTCCGACCATTGTAATTGCCTTTTCTTGGCAATGGATTTTAAACGGTGTATATGGCTATTTAC
CTAATATGTTAGTCCAACTTGGCTTAATGGAAATTGCACCTAATTTCTTATCTGACCGCACTTGGGCGTTTGTATGTCTT
GTTTTTATTAACATATGGTTCGGCGCACCGATGATTATGGTGAATGTACTGTCCGCCTTACAGACTGTTCCCGCTGATCA
ATATGAAGCCGCCAAAATTGATGGCGCAAACGCTTGGCAAATCTTCCGTTACATCACTTTACCGCATATTAAAGTGGTCG
TGGGATTATTGGTGGTATTAAGAACAGTTTGGGTATTCAATAACTTTGACATCATTTACCTCATTACAGGTGGTGGTCCT
GCAAATGCCACCATGACTTTACCAATTTTTGCCTATGACATGGGCTGGGGAAGTAAATTGTTAGGACGCTCATCCGCCGT
CACCGTGCTGCTCTTTATCTTCTTGCTCTCTGTTTGCTTTATTTACTTCAAAATCATTAACCGTTGGGAAAAAGAGGGGA
AATAA

Upstream 100 bases:

>100_bases
AATATCTTGCCAATTTACTTATGTAAATAAGTATTAGGGGGGCTTTGTCTAAAATTTCACAATGTCGCATATCTTATGGA
TTTTATAAGAAGTTCTCCTT

Downstream 100 bases:

>100_bases
TATGAAAAAGAAATCTACTCTATTGGGCGACATTATTTCTCATCTTTTCCTGATGGTTACCACCATTATTGCGGTTTTTC
CACTGATATGGATTTTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MYYKHHNYTRWIFVLPAILVVSVLFIYPFLSSIFYSFTNKNLIMPHYSFVGLANYRAVLSDPNFWMSFFNSLKWTIFSLT
GQVLVGFFLALALNRVKHFKWLYKILLIIPWAFPTIVIAFSWQWILNGVYGYLPNMLVQLGLMEIAPNFLSDRTWAFVCL
VFINIWFGAPMIMVNVLSALQTVPADQYEAAKIDGANAWQIFRYITLPHIKVVVGLLVVLRTVWVFNNFDIIYLITGGGP
ANATMTLPIFAYDMGWGSKLLGRSSAVTVLLFIFLLSVCFIYFKIINRWEKEGK

Sequences:

>Translated_294_residues
MYYKHHNYTRWIFVLPAILVVSVLFIYPFLSSIFYSFTNKNLIMPHYSFVGLANYRAVLSDPNFWMSFFNSLKWTIFSLT
GQVLVGFFLALALNRVKHFKWLYKILLIIPWAFPTIVIAFSWQWILNGVYGYLPNMLVQLGLMEIAPNFLSDRTWAFVCL
VFINIWFGAPMIMVNVLSALQTVPADQYEAAKIDGANAWQIFRYITLPHIKVVVGLLVVLRTVWVFNNFDIIYLITGGGP
ANATMTLPIFAYDMGWGSKLLGRSSAVTVLLFIFLLSVCFIYFKIINRWEKEGK
>Mature_294_residues
MYYKHHNYTRWIFVLPAILVVSVLFIYPFLSSIFYSFTNKNLIMPHYSFVGLANYRAVLSDPNFWMSFFNSLKWTIFSLT
GQVLVGFFLALALNRVKHFKWLYKILLIIPWAFPTIVIAFSWQWILNGVYGYLPNMLVQLGLMEIAPNFLSDRTWAFVCL
VFINIWFGAPMIMVNVLSALQTVPADQYEAAKIDGANAWQIFRYITLPHIKVVVGLLVVLRTVWVFNNFDIIYLITGGGP
ANATMTLPIFAYDMGWGSKLLGRSSAVTVLLFIFLLSVCFIYFKIINRWEKEGK

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=266, Percent_Identity=33.8345864661654, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI1790465, Length=259, Percent_Identity=29.7297297297297, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1789861, Length=283, Percent_Identity=27.5618374558304, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33973; Mature: 33973

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCCEEEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]