Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 15603550

GI number: 15603550

Start: 1894345

End: 1895046

Strand: Direct

Name: yhhW [C]

Synonym: PM1685

Alternate gene names: 15603550

Gene position: 1894345-1895046 (Clockwise)

Preceding gene: 15603549

Following gene: 15603551

Centisome position: 83.91

GC content: 41.6

Gene sequence:

>702_bases
ATGTTACGCGTACGCTATGCACATGAAAGAGGAAAAAGTCATCCCGCAATCCACTGGCTAAGGGGATATCATAGTTTTTC
CTTTGCTGATTATTATTCTCCCCAACATATACACTTCTCACATTTACGTGTGATTAACGAAGATATTATTGCCCCACAAC
ACGGTTTCGATATGCATCCGCATCAAGATATGGAAATTTTAACCTATATCTTGTCTGGCACAATTGAACATCAAGATAGC
ATGGGCAATCACACCCAATTACATGCTGGCGAATTTCAAATCATGTCGGCAGGATCAGGCGTGCATCACGCTGAAATCAA
TCCAAGTAGTGAGCATGATGTCCATTTATACCAAATCTGGATCTTACCGAAGTCAAAAGGCATTGCACCGCGTTATGAAC
AAGGTTGCTTTGCTGACACAGAAGGAGCAACCTTAATTTTATCCCCGGAAGCAAAAGACGGCGCCTTTTATATTCATCAA
GACATGTCTTTATGGCGTTGGCAACTTAGTTTAGAACAAAGTGCGGTCAAAACGATTCCACTTTTGCCAACGCGGCGCTA
TTGGCTACAACTGGTAAAAGGACAACTCCGTGTGAATGACGTCCTACTCAACACCAGTGACGGTCTGGCAATTACACACG
AAAATGTCTTACAGATTGAACTGATTCAAAACAGCGAATTTTTATTGTTCGATTTAGTATAA

Upstream 100 bases:

>100_bases
AAGAGTGGTGTTTTTTTATCCATTAGAAAAAAGAGCATTGACGACAGGCATGCTGCCAATCAGACAAGCCTCCAGTGCTT
CACAAACACAGGAATAGATT

Downstream 100 bases:

>100_bases
CACAAGAAAAATAGCGGAATTCTCCGCTATTTTTTGTTATCCTTAGTCTAATTTAAGCTCTATGGATATTTGCTATGACA
GATCAACACGCTTTTGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein PM1685

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MLRVRYAHERGKSHPAIHWLRGYHSFSFADYYSPQHIHFSHLRVINEDIIAPQHGFDMHPHQDMEILTYILSGTIEHQDS
MGNHTQLHAGEFQIMSAGSGVHHAEINPSSEHDVHLYQIWILPKSKGIAPRYEQGCFADTEGATLILSPEAKDGAFYIHQ
DMSLWRWQLSLEQSAVKTIPLLPTRRYWLQLVKGQLRVNDVLLNTSDGLAITHENVLQIELIQNSEFLLFDLV

Sequences:

>Translated_233_residues
MLRVRYAHERGKSHPAIHWLRGYHSFSFADYYSPQHIHFSHLRVINEDIIAPQHGFDMHPHQDMEILTYILSGTIEHQDS
MGNHTQLHAGEFQIMSAGSGVHHAEINPSSEHDVHLYQIWILPKSKGIAPRYEQGCFADTEGATLILSPEAKDGAFYIHQ
DMSLWRWQLSLEQSAVKTIPLLPTRRYWLQLVKGQLRVNDVLLNTSDGLAITHENVLQIELIQNSEFLLFDLV
>Mature_233_residues
MLRVRYAHERGKSHPAIHWLRGYHSFSFADYYSPQHIHFSHLRVINEDIIAPQHGFDMHPHQDMEILTYILSGTIEHQDS
MGNHTQLHAGEFQIMSAGSGVHHAEINPSSEHDVHLYQIWILPKSKGIAPRYEQGCFADTEGATLILSPEAKDGAFYIHQ
DMSLWRWQLSLEQSAVKTIPLLPTRRYWLQLVKGQLRVNDVLLNTSDGLAITHENVLQIELIQNSEFLLFDLV

Specific function: Putative quercetin 2,3-dioxygenase

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family

Homologues:

Organism=Escherichia coli, GI1789847, Length=232, Percent_Identity=54.3103448275862, Blast_Score=259, Evalue=1e-70,
Organism=Escherichia coli, GI1789493, Length=239, Percent_Identity=28.8702928870293, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1685_PASMU (Q9CKD7)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246624.1
- ProteinModelPortal:   Q9CKD7
- SMR:   Q9CKD7
- GeneID:   1245032
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1685
- NMPDR:   fig|272843.1.peg.1686
- HOGENOM:   HBG370454
- OMA:   SEYNPNS
- BioCyc:   PMUL272843:PM1685-MONOMER
- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710
- Gene3D:   G3DSA:2.60.120.10
- PANTHER:   PTHR13903
- PIRSF:   PIRSF006232

Pfam domain/function: PF02678 Pirin; SSF51182 RmlC_like_cupin

EC number: =1.13.11.24

Molecular weight: Translated: 26805; Mature: 26805

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVRYAHERGKSHPAIHWLRGYHSFSFADYYSPQHIHFSHLRVINEDIIAPQHGFDMHP
CEEEEEHHHCCCCCCEEEEECCCCCCCCHHCCCCCCEEHHHHEEEHHHHCCCCCCCCCCC
HQDMEILTYILSGTIEHQDSMGNHTQLHAGEFQIMSAGSGVHHAEINPSSEHDVHLYQIW
CCCHHHHHHHHHCCEECCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCCCEEEEEEE
ILPKSKGIAPRYEQGCFADTEGATLILSPEAKDGAFYIHQDMSLWRWQLSLEQSAVKTIP
EEECCCCCCCCCCCCCEECCCCCEEEECCCCCCCEEEEECCCEEEEEEEEHHHHHHHEEC
LLPTRRYWLQLVKGQLRVNDVLLNTSDGLAITHENVLQIELIQNSEFLLFDLV
CCCCHHHHHHHHHCCEEEEEEEEECCCCEEEECCCEEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MLRVRYAHERGKSHPAIHWLRGYHSFSFADYYSPQHIHFSHLRVINEDIIAPQHGFDMHP
CEEEEEHHHCCCCCCEEEEECCCCCCCCHHCCCCCCEEHHHHEEEHHHHCCCCCCCCCCC
HQDMEILTYILSGTIEHQDSMGNHTQLHAGEFQIMSAGSGVHHAEINPSSEHDVHLYQIW
CCCHHHHHHHHHCCEECCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCCCEEEEEEE
ILPKSKGIAPRYEQGCFADTEGATLILSPEAKDGAFYIHQDMSLWRWQLSLEQSAVKTIP
EEECCCCCCCCCCCCCEECCCCCEEEECCCCCCCEEEEECCCEEEEEEEEHHHHHHHEEC
LLPTRRYWLQLVKGQLRVNDVLLNTSDGLAITHENVLQIELIQNSEFLLFDLV
CCCCHHHHHHHHHCCEEEEEEEEECCCCEEEECCCEEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100