Click here to switch to the map view.

The map label for this gene is ybeQ [H]

Identifier: 15603476

GI number: 15603476

Start: 1821399

End: 1821917

Strand: Direct

Name: ybeQ [H]

Synonym: PM1611

Alternate gene names: 15603476

Gene position: 1821399-1821917 (Clockwise)

Preceding gene: 15603475

Following gene: 15603477

Centisome position: 80.68

GC content: 45.47

Gene sequence:

>519_bases
ATGCAAAGATGGAGCAAAACACTGCTCAGTATTATGTTGCTTGTGAGTACAATGAATGTCTTCGCTCAACGAGAAGAAGA
CCCGGTTTTTGAACAAGGTGTTGAAGCCTATAAACGCGGTGATCATGCTACTGCGTTTAAACTTTGGCTATCACGAGCCG
AGCAAGGGGAGATGAGCGCTCAATTTAATGTGGGGAGAATGTACGACGATGGTGACGGTGTTGAACAAGACAAGCAACAA
GCTTTGAAATGGTATCAAAAATCCGCTGAGCAAAATCACCCCGATGCACAGTATCATTTAGGGCTGATGTACAGTGAAGG
CGACGGCATTGCACAAGACTTTAAACAAGCCTACAAATGGTATAGCCAATCTGCCGTACAGGGCGATGCGCGTGCGCTCT
ATAATTTAGGTACACTCTATGCGAATGGCGAAGGAATCGAACGTGATTGGGACAGAGCGAAAATGTATTTTAAACAAGCT
TGCAAAGCGGGTTTGCCAGAAGGGTGTGATTGGGAGTAA

Upstream 100 bases:

>100_bases
CCTTCTACTTACCCGCGGGCAGTTATGCCACTGCCTTGGTGAGAGAAGTGGTGAATGTGCAAGAAGATTAATTTCAACCC
AACATTTAAAAGGAATGGCT

Downstream 100 bases:

>100_bases
AACGTTTCTAAAAAGCACCGCACTTTAAACAAACGCATTCAAAGCATATAACAAAGAATAAGGACAACATCATGAAAATT
CTTCTCAGCAACGACGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MQRWSKTLLSIMLLVSTMNVFAQREEDPVFEQGVEAYKRGDHATAFKLWLSRAEQGEMSAQFNVGRMYDDGDGVEQDKQQ
ALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGIERDWDRAKMYFKQA
CKAGLPEGCDWE

Sequences:

>Translated_172_residues
MQRWSKTLLSIMLLVSTMNVFAQREEDPVFEQGVEAYKRGDHATAFKLWLSRAEQGEMSAQFNVGRMYDDGDGVEQDKQQ
ALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGIERDWDRAKMYFKQA
CKAGLPEGCDWE
>Mature_172_residues
MQRWSKTLLSIMLLVSTMNVFAQREEDPVFEQGVEAYKRGDHATAFKLWLSRAEQGEMSAQFNVGRMYDDGDGVEQDKQQ
ALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGIERDWDRAKMYFKQA
CKAGLPEGCDWE

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=124, Percent_Identity=37.9032258064516, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI19923669, Length=121, Percent_Identity=37.1900826446281, Blast_Score=80, Evalue=6e-16,
Organism=Escherichia coli, GI87081769, Length=123, Percent_Identity=40.650406504065, Blast_Score=94, Evalue=4e-21,
Organism=Escherichia coli, GI1786867, Length=125, Percent_Identity=40.8, Blast_Score=80, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17563256, Length=128, Percent_Identity=31.25, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355295, Length=126, Percent_Identity=35.7142857142857, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 19760; Mature: 19760

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRWSKTLLSIMLLVSTMNVFAQREEDPVFEQGVEAYKRGDHATAFKLWLSRAEQGEMSA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
QFNVGRMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHH
YSQSAVQGDARALYNLGTLYANGEGIERDWDRAKMYFKQACKAGLPEGCDWE
HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQRWSKTLLSIMLLVSTMNVFAQREEDPVFEQGVEAYKRGDHATAFKLWLSRAEQGEMSA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
QFNVGRMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHH
YSQSAVQGDARALYNLGTLYANGEGIERDWDRAKMYFKQACKAGLPEGCDWE
HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]