| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yheS [C]
Identifier: 15603447
GI number: 15603447
Start: 1791589
End: 1793511
Strand: Direct
Name: yheS [C]
Synonym: PM1582
Alternate gene names: 15603447
Gene position: 1791589-1793511 (Clockwise)
Preceding gene: 15603445
Following gene: 15603457
Centisome position: 79.36
GC content: 42.9
Gene sequence:
>1923_bases ATGCTTTTTTTTACAAATTTAACATTAAAGCGCGGGCAATCCGTGTTGCTCGAAAATACATCGGTTGCAATTAACCCCGG ACAAAAAGTGGGCTTAGTCGGAAAAAATGGGTGTGGCAAGTCATCTTTATTGGCATTATTAAAAAAAGAGATTAGCGCAG AAGGCGGTGACGTCAGTTTTCCTTCCAATTGGACGTTATCTTGGGTCAATCAAGAAACGCCTGCCTTAATGACCTCTGCA ATCGATTATGTGATCGAAGGTGATCGGGAATATTGCCGCTTACAACGTGAGTTAGTATTAGCCAATGAACAAGGCGATGG ACATAAAATTGCTCATCTGCATGCGCAATTAGATGCGATTGATGCATGGACAATTCAAGCACGCGCTGCCGCACTATTGC ACGGTTTGGGCTTTAGTCAAAGCGAATTACAGCAGCCAGTCAAAGCCTTTTCAGGTGGTTGGCGTATGCGCTTAAATTTA GCACAAGCATTACTCTGTCCTTCTGATTTATTATTATTGGATGAGCCGACTAACCACTTAGATTTAGATACGGTCATGTG GTTAGAGCGTTGGCTGGTACAATACAAAGGCACCTTAGTGTTAATTTCACACGATCGTGATTTTCTGGATCCTATCGTCA ATAAAATTATCCATATTGAACATCAGAAGTTGAATGAATATACCGGTGATTATTCTTCCTTTGAAGTTCAACGCGCCACG AAACTGGCACAGCAGAATGCACTTTATCGTCAACAGCAACAAAAAGTCGCACATTTACAAAAATATATTGATCGTTTCAA GGCAAAAGCTTCCAAAGCTAAACAGGCGCAAAGTCGGGTGAAAGCCTTGGAACGGATGGAATTAATCGCCCCAGCTTATG TGGATAATCCGTTTCATTTTACCTTTCGTGAACCCTTGTCTTTACCGAATCCGTTGTTAGCTATGCAGCAAGTAAGCGCA GGCTATCCGAGCGCAGAGGGACAAAGTGCGGTCGAAATTTTAGAAAAAATCAAATTGAACTTGGTACCAGGATCTCGGAT TGGACTATTAGGGAAAAATGGCGCGGGGAAATCGACACTGATTAAATTATTGGCAGGTGAATTAACACCGCTTTCGGGTC AGGTTCAGTTGGCGAAAGGTGTCCAGCTTGGCTATTTTGCTCAACATCAATTAGAAACGTTACGTCTCGATGAAAGCCCA CTTTGGCATTTACAAAAGCTAGCACCACAACATACAGAACAGCAGTTACGGGATTATTTGGGCGGTTTTGCGTTCAAAGG CGATAAGGTGAATGAGGCGGTGAAGTCCTTTTCTGGTGGGGAGAAAGCCCGTTTAGTGTTAGCCTTGATTGTGTGGCAAC GTCCAAACTTATTGTTACTCGATGAGCCGACTAACCACTTAGATTTAGATATGCGCCAAGCGCTGACGGAAGCCTTGGTA GATTATCAAGGGTCGTTGGTCGTGGTATCGCATGATCGCCATTTATTACGTAATACAGTGGAAGAATTTTATCTGGTACA TGATAAAAAGGTTGAGCCTTTCAGTGGCGATTTAGAGGATTACCAGAAATGGTTAACTGATGTTAATCGCAATACGGAAG AAAAAGCGGATACCAATGCACCGGTTGATAATGCCAATAGCAGTGCGAATCGCAAAGAACAAAAACGCCGTGAGGCAGAA TTGCGACAACAAACCGCCCCGTTACGCAAAAAATTGCAGCAACTTGAACAAAAAATGGAAACCGTATCGAGCCACTTAGG GCAAATCGAAGCGCAACTGGTCGAATCGGATTTGTATTTGGCGGAAAATAAAGAAAAATTGACCGCACTTTTAAATGAGC AAGTGAGCAATAAAAAACACTTAGAAACGCTTGAAATGGATTGGCTCGCGTTACAAGAGGAACTCGAAGGACTACTGGAG TAA
Upstream 100 bases:
>100_bases ACAAATTGCACGATTAACGAATCAAACATTGGCAACTCCGATAAAAAAGTAGAGAATAGCTCATTCTATAATAAAAGTTG AACAAGACATACGAGAACGC
Downstream 100 bases:
>100_bases GTAAACGTGGGAACAGGAAAGGACGTGGATTGGCACGTCCTTTTTTGTTTATTTTCGTTGATTTAATGTGGTTTTGAAAT GTGCTTCAATTTGCTCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MLFFTNLTLKRGQSVLLENTSVAINPGQKVGLVGKNGCGKSSLLALLKKEISAEGGDVSFPSNWTLSWVNQETPALMTSA IDYVIEGDREYCRLQRELVLANEQGDGHKIAHLHAQLDAIDAWTIQARAAALLHGLGFSQSELQQPVKAFSGGWRMRLNL AQALLCPSDLLLLDEPTNHLDLDTVMWLERWLVQYKGTLVLISHDRDFLDPIVNKIIHIEHQKLNEYTGDYSSFEVQRAT KLAQQNALYRQQQQKVAHLQKYIDRFKAKASKAKQAQSRVKALERMELIAPAYVDNPFHFTFREPLSLPNPLLAMQQVSA GYPSAEGQSAVEILEKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTPLSGQVQLAKGVQLGYFAQHQLETLRLDESP LWHLQKLAPQHTEQQLRDYLGGFAFKGDKVNEAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALV DYQGSLVVVSHDRHLLRNTVEEFYLVHDKKVEPFSGDLEDYQKWLTDVNRNTEEKADTNAPVDNANSSANRKEQKRREAE LRQQTAPLRKKLQQLEQKMETVSSHLGQIEAQLVESDLYLAENKEKLTALLNEQVSNKKHLETLEMDWLALQEELEGLLE
Sequences:
>Translated_640_residues MLFFTNLTLKRGQSVLLENTSVAINPGQKVGLVGKNGCGKSSLLALLKKEISAEGGDVSFPSNWTLSWVNQETPALMTSA IDYVIEGDREYCRLQRELVLANEQGDGHKIAHLHAQLDAIDAWTIQARAAALLHGLGFSQSELQQPVKAFSGGWRMRLNL AQALLCPSDLLLLDEPTNHLDLDTVMWLERWLVQYKGTLVLISHDRDFLDPIVNKIIHIEHQKLNEYTGDYSSFEVQRAT KLAQQNALYRQQQQKVAHLQKYIDRFKAKASKAKQAQSRVKALERMELIAPAYVDNPFHFTFREPLSLPNPLLAMQQVSA GYPSAEGQSAVEILEKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTPLSGQVQLAKGVQLGYFAQHQLETLRLDESP LWHLQKLAPQHTEQQLRDYLGGFAFKGDKVNEAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALV DYQGSLVVVSHDRHLLRNTVEEFYLVHDKKVEPFSGDLEDYQKWLTDVNRNTEEKADTNAPVDNANSSANRKEQKRREAE LRQQTAPLRKKLQQLEQKMETVSSHLGQIEAQLVESDLYLAENKEKLTALLNEQVSNKKHLETLEMDWLALQEELEGLLE >Mature_640_residues MLFFTNLTLKRGQSVLLENTSVAINPGQKVGLVGKNGCGKSSLLALLKKEISAEGGDVSFPSNWTLSWVNQETPALMTSA IDYVIEGDREYCRLQRELVLANEQGDGHKIAHLHAQLDAIDAWTIQARAAALLHGLGFSQSELQQPVKAFSGGWRMRLNL AQALLCPSDLLLLDEPTNHLDLDTVMWLERWLVQYKGTLVLISHDRDFLDPIVNKIIHIEHQKLNEYTGDYSSFEVQRAT KLAQQNALYRQQQQKVAHLQKYIDRFKAKASKAKQAQSRVKALERMELIAPAYVDNPFHFTFREPLSLPNPLLAMQQVSA GYPSAEGQSAVEILEKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTPLSGQVQLAKGVQLGYFAQHQLETLRLDESP LWHLQKLAPQHTEQQLRDYLGGFAFKGDKVNEAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALV DYQGSLVVVSHDRHLLRNTVEEFYLVHDKKVEPFSGDLEDYQKWLTDVNRNTEEKADTNAPVDNANSSANRKEQKRREAE LRQQTAPLRKKLQQLEQKMETVSSHLGQIEAQLVESDLYLAENKEKLTALLNEQVSNKKHLETLEMDWLALQEELEGLLE
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=35.7677902621723, Blast_Score=337, Evalue=2e-92, Organism=Homo sapiens, GI10947137, Length=530, Percent_Identity=36.2264150943396, Blast_Score=328, Evalue=1e-89, Organism=Homo sapiens, GI27881506, Length=530, Percent_Identity=36.2264150943396, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI10947135, Length=524, Percent_Identity=35.1145038167939, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI69354671, Length=524, Percent_Identity=35.1145038167939, Blast_Score=259, Evalue=6e-69, Organism=Escherichia coli, GI1789751, Length=639, Percent_Identity=69.170579029734, Blast_Score=922, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=533, Percent_Identity=33.9587242026266, Blast_Score=315, Evalue=7e-87, Organism=Escherichia coli, GI1787182, Length=631, Percent_Identity=27.2583201267829, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI2367384, Length=530, Percent_Identity=31.3207547169811, Blast_Score=210, Evalue=3e-55, Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=33, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787758, Length=241, Percent_Identity=26.9709543568465, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1788002, Length=187, Percent_Identity=33.6898395721925, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786319, Length=200, Percent_Identity=30.5, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI48994997, Length=208, Percent_Identity=25.4807692307692, Blast_Score=66, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17553372, Length=524, Percent_Identity=37.5954198473282, Blast_Score=340, Evalue=2e-93, Organism=Caenorhabditis elegans, GI17555318, Length=529, Percent_Identity=34.4045368620038, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=33.6363636363636, Blast_Score=296, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17565586, Length=226, Percent_Identity=26.1061946902655, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17556528, Length=311, Percent_Identity=23.7942122186495, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=548, Percent_Identity=34.1240875912409, Blast_Score=322, Evalue=2e-88, Organism=Saccharomyces cerevisiae, GI6320874, Length=519, Percent_Identity=35.0674373795761, Blast_Score=319, Evalue=9e-88, Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=31.3624678663239, Blast_Score=170, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6323278, Length=407, Percent_Identity=29.97542997543, Blast_Score=147, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6324314, Length=406, Percent_Identity=28.0788177339901, Blast_Score=146, Evalue=9e-36, Organism=Drosophila melanogaster, GI24666836, Length=526, Percent_Identity=36.5019011406844, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24642252, Length=542, Percent_Identity=37.4538745387454, Blast_Score=357, Evalue=2e-98, Organism=Drosophila melanogaster, GI18859989, Length=542, Percent_Identity=37.4538745387454, Blast_Score=357, Evalue=2e-98, Organism=Drosophila melanogaster, GI24641342, Length=543, Percent_Identity=33.7016574585635, Blast_Score=305, Evalue=5e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 72119; Mature: 72119
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFFTNLTLKRGQSVLLENTSVAINPGQKVGLVGKNGCGKSSLLALLKKEISAEGGDVSF CEEEEEEEHHCCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC PSNWTLSWVNQETPALMTSAIDYVIEGDREYCRLQRELVLANEQGDGHKIAHLHAQLDAI CCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCEEEEHHHHHHHH DAWTIQARAAALLHGLGFSQSELQQPVKAFSGGWRMRLNLAQALLCPSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCC DLDTVMWLERWLVQYKGTLVLISHDRDFLDPIVNKIIHIEHQKLNEYTGDYSSFEVQRAT CHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KLAQQNALYRQQQQKVAHLQKYIDRFKAKASKAKQAQSRVKALERMELIAPAYVDNPFHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TFREPLSLPNPLLAMQQVSAGYPSAEGQSAVEILEKIKLNLVPGSRIGLLGKNGAGKSTL EECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHH IKLLAGELTPLSGQVQLAKGVQLGYFAQHQLETLRLDESPLWHLQKLAPQHTEQQLRDYL HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH GGFAFKGDKVNEAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALV CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHH DYQGSLVVVSHDRHLLRNTVEEFYLVHDKKVEPFSGDLEDYQKWLTDVNRNTEEKADTNA CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCC PVDNANSSANRKEQKRREAELRQQTAPLRKKLQQLEQKMETVSSHLGQIEAQLVESDLYL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AENKEKLTALLNEQVSNKKHLETLEMDWLALQEELEGLLE HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLFFTNLTLKRGQSVLLENTSVAINPGQKVGLVGKNGCGKSSLLALLKKEISAEGGDVSF CEEEEEEEHHCCCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC PSNWTLSWVNQETPALMTSAIDYVIEGDREYCRLQRELVLANEQGDGHKIAHLHAQLDAI CCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCEEEEHHHHHHHH DAWTIQARAAALLHGLGFSQSELQQPVKAFSGGWRMRLNLAQALLCPSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCC DLDTVMWLERWLVQYKGTLVLISHDRDFLDPIVNKIIHIEHQKLNEYTGDYSSFEVQRAT CHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KLAQQNALYRQQQQKVAHLQKYIDRFKAKASKAKQAQSRVKALERMELIAPAYVDNPFHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TFREPLSLPNPLLAMQQVSAGYPSAEGQSAVEILEKIKLNLVPGSRIGLLGKNGAGKSTL EECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHH IKLLAGELTPLSGQVQLAKGVQLGYFAQHQLETLRLDESPLWHLQKLAPQHTEQQLRDYL HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH GGFAFKGDKVNEAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALV CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHH DYQGSLVVVSHDRHLLRNTVEEFYLVHDKKVEPFSGDLEDYQKWLTDVNRNTEEKADTNA CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCC PVDNANSSANRKEQKRREAELRQQTAPLRKKLQQLEQKMETVSSHLGQIEAQLVESDLYL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AENKEKLTALLNEQVSNKKHLETLEMDWLALQEELEGLLE HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]