Click here to switch to the map view.

The map label for this gene is 15603445

Identifier: 15603445

GI number: 15603445

Start: 1788816

End: 1790798

Strand: Direct

Name: 15603445

Synonym: PM1580

Alternate gene names: NA

Gene position: 1788816-1790798 (Clockwise)

Preceding gene: 15603444

Following gene: 15603447

Centisome position: 79.24

GC content: 45.18

Gene sequence:

>1983_bases
ATGACGGATAAAATCCAAACAGATACTACTAATCTCGGTAGCCGAGAACAAGCGATCTTAGAAAAATATGATCGCGAATC
GGTGACCCGACAGACCAATCCTTTGCAAAAAGGGCTCATTACGGTCATTGCCGTGTGCTATTCCTTATTTCATCTCTACA
TTACGTTTTATCCTCTACCGACTTTATTACAACGTGCGATTCATGTTGGCGTTGGGGCAATTTTGATTTTTTTAATTTAT
CCTGCGACACGAAAACATCGGCAGGGTGGTGTCGCTTGGTATGACTGGCTATGGGTCGGGATTGCTAGCCTTGGCATGGG
GTATTTAGTCCATCAGTATAACGACATTATGACGATTCGCGGTGGGATTCCAAATACGGCAGATATTGTAGTGGCTATTC
TGACGGTATTGGCGGTGTTAGAAGTCACTCGTCGTATAACCGGACTGATTCTCGTACTTTTTGCTTTGCTTTTCCTCGCG
TATCCTTTTGTGAGTTCAATGGACTTTATTCCTGACCGCTTACTGACCCGCCCTTATGATGTGGGGGATATTTTTGGTCA
ACTTTATCTCAAAACCGAAGGGTTATATTCCTCAGCAATCGGCGCCTCGGTGACGTTCATTTTCTTGTTTATTTTGTTTG
GTGCCTTTCTTGCTAAATCGGGGATGGGGCAGTTATTTAATGACATCGCGTTAGCCATTGCCGGCGATAAACAAGGGGGA
CCGGCGAAAGTGGCGGTGATTTCAAGTGGCTTTATGGGCAGTATTAATGGGGCGGCAGTGGCAAATGTGGTCAGCACGGG
CGCGTTTACGATCCCTTTAATGAAAAAAATCGGCTATCACCGCAATTTTGCCGGGGCAGTAGAAGCAAGTGCTTCGGTAG
GTGGACAAATTCTCCCACCAATTATGGGCGCGAGTGCGTTTATTATGGCGGAAACAACAGGCGTGAGTTACGGCACGATT
GCACTTGCCGCACTTTTTCCTGCCGTGTTGTATTATCTTGGAGTAATTGCGCAAGTGCATTTCCGTGCTGGCAAACAAAA
CTTGAAAGGATTGTCAAAAGATCAATTACCGCAGTTTAAAGCGATTATGAAAGCACGTGGGCATATGTTATTGCCGATTG
TTGCATTGGTGTGGTTTTTGATTGAATCGGTGCCGATTGGTTATGCGGCGGTTTATACCATTGGGATTACGGTATTAATT
AGCCAGTTGCGCAAAGAAACACGTATGGGAATAAAGGAAATTATTGCTGCGTTGGAAGATGGGGCGAAACAATCACTGTC
GGTCATGGCGGCTTGTGCGGTCGTCGGGATTGTGATTGGCGTGGTGAATTTAACCAGTTTTGGCACAGTAATTACCTCGT
CTATTGTAACTTTGGGGGCAGGCTCGTTATTATTCACCTTATTTTTAACCATGATTGCGTCTATGATTTTAGGCATGGGC
TTGCCGTCTATTCCTGCGTATATCATCACGGCAACCATGGCTGCACCTGCACTTGCGACGTTTAATGTCCCTGTGTTAGT
GGCACATATGTTTGTGTTTTATTTTGGTATTTTTGCCAATATTACGCCTCCAGTCGCCTTAGCTGCGTTTGCGGGGGCGG
GGATTGCACAGGGCGATCCGATGAAAACAGGCTGGCAATCGCTACGTTTGGCAGTGGCGGGTTTTATTGTGCCGTTTATG
TTTGTGTATAACCCGAATATGCTGATGATTGATGTGAGCAATGTCGCGGTGACAGCAAAAACGTTCCCACTCCCTCATAT
CGTTGACATTATCAGTGTGTTGATTTCTTCGACAATTGGTGTATTAGGTTTATCAGCTGCCACAGAAGGATATTTCAAAC
AGGCAATGCCAATTTGGCAACGCGTAATATTAGCTATTGGTTCCTTTATGTTAATTATTCCAGAACTAATGACAGATTTG
ATTGGTATCGCAGTGGTGGCGGTCATGATATGGCTGAATTTCCGTCGACCTTCATTGCAGTAA

Upstream 100 bases:

>100_bases
TGGCATTTCCCGATTTATCAAACCTTACCCGATTATTCCACTGTCAATATTAAACCAACACAATCGCCTTTGATTCTTTT
TTTGTTAGGGAGTGCATGTA

Downstream 100 bases:

>100_bases
CGCGGGTACATAAACAAAAAGGCGATTATCTATCGCCTTTTTGTTGTTGGAATGCAGGGAGAAATCGGTATGAATTCACC
GTATATTCGTCGTTGTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; Trap Family Transporter; TRAP-Type Transporter Permease Component; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; C4-Dicarboxylate Anaerobic Carrier; Permease; TRAP-Type Transport System Permease; TRAP Transporter Permease; Integral Membrane Protein; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; TRAP Transporter Large Permease; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP Family Transporter; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP-Type Transporter Fused Permeases; Trap Transporter; C4-Dicarboxylate Transporter; TRAP-Type Transport System; TRAP Transporter Membrane-Spanning Component; TRAP Type Transporter Protein; Inner Membrane Protein

Number of amino acids: Translated: 660; Mature: 659

Protein sequence:

>660_residues
MTDKIQTDTTNLGSREQAILEKYDRESVTRQTNPLQKGLITVIAVCYSLFHLYITFYPLPTLLQRAIHVGVGAILIFLIY
PATRKHRQGGVAWYDWLWVGIASLGMGYLVHQYNDIMTIRGGIPNTADIVVAILTVLAVLEVTRRITGLILVLFALLFLA
YPFVSSMDFIPDRLLTRPYDVGDIFGQLYLKTEGLYSSAIGASVTFIFLFILFGAFLAKSGMGQLFNDIALAIAGDKQGG
PAKVAVISSGFMGSINGAAVANVVSTGAFTIPLMKKIGYHRNFAGAVEASASVGGQILPPIMGASAFIMAETTGVSYGTI
ALAALFPAVLYYLGVIAQVHFRAGKQNLKGLSKDQLPQFKAIMKARGHMLLPIVALVWFLIESVPIGYAAVYTIGITVLI
SQLRKETRMGIKEIIAALEDGAKQSLSVMAACAVVGIVIGVVNLTSFGTVITSSIVTLGAGSLLFTLFLTMIASMILGMG
LPSIPAYIITATMAAPALATFNVPVLVAHMFVFYFGIFANITPPVALAAFAGAGIAQGDPMKTGWQSLRLAVAGFIVPFM
FVYNPNMLMIDVSNVAVTAKTFPLPHIVDIISVLISSTIGVLGLSAATEGYFKQAMPIWQRVILAIGSFMLIIPELMTDL
IGIAVVAVMIWLNFRRPSLQ

Sequences:

>Translated_660_residues
MTDKIQTDTTNLGSREQAILEKYDRESVTRQTNPLQKGLITVIAVCYSLFHLYITFYPLPTLLQRAIHVGVGAILIFLIY
PATRKHRQGGVAWYDWLWVGIASLGMGYLVHQYNDIMTIRGGIPNTADIVVAILTVLAVLEVTRRITGLILVLFALLFLA
YPFVSSMDFIPDRLLTRPYDVGDIFGQLYLKTEGLYSSAIGASVTFIFLFILFGAFLAKSGMGQLFNDIALAIAGDKQGG
PAKVAVISSGFMGSINGAAVANVVSTGAFTIPLMKKIGYHRNFAGAVEASASVGGQILPPIMGASAFIMAETTGVSYGTI
ALAALFPAVLYYLGVIAQVHFRAGKQNLKGLSKDQLPQFKAIMKARGHMLLPIVALVWFLIESVPIGYAAVYTIGITVLI
SQLRKETRMGIKEIIAALEDGAKQSLSVMAACAVVGIVIGVVNLTSFGTVITSSIVTLGAGSLLFTLFLTMIASMILGMG
LPSIPAYIITATMAAPALATFNVPVLVAHMFVFYFGIFANITPPVALAAFAGAGIAQGDPMKTGWQSLRLAVAGFIVPFM
FVYNPNMLMIDVSNVAVTAKTFPLPHIVDIISVLISSTIGVLGLSAATEGYFKQAMPIWQRVILAIGSFMLIIPELMTDL
IGIAVVAVMIWLNFRRPSLQ
>Mature_659_residues
TDKIQTDTTNLGSREQAILEKYDRESVTRQTNPLQKGLITVIAVCYSLFHLYITFYPLPTLLQRAIHVGVGAILIFLIYP
ATRKHRQGGVAWYDWLWVGIASLGMGYLVHQYNDIMTIRGGIPNTADIVVAILTVLAVLEVTRRITGLILVLFALLFLAY
PFVSSMDFIPDRLLTRPYDVGDIFGQLYLKTEGLYSSAIGASVTFIFLFILFGAFLAKSGMGQLFNDIALAIAGDKQGGP
AKVAVISSGFMGSINGAAVANVVSTGAFTIPLMKKIGYHRNFAGAVEASASVGGQILPPIMGASAFIMAETTGVSYGTIA
LAALFPAVLYYLGVIAQVHFRAGKQNLKGLSKDQLPQFKAIMKARGHMLLPIVALVWFLIESVPIGYAAVYTIGITVLIS
QLRKETRMGIKEIIAALEDGAKQSLSVMAACAVVGIVIGVVNLTSFGTVITSSIVTLGAGSLLFTLFLTMIASMILGMGL
PSIPAYIITATMAAPALATFNVPVLVAHMFVFYFGIFANITPPVALAAFAGAGIAQGDPMKTGWQSLRLAVAGFIVPFMF
VYNPNMLMIDVSNVAVTAKTFPLPHIVDIISVLISSTIGVLGLSAATEGYFKQAMPIWQRVILAIGSFMLIIPELMTDLI
GIAVVAVMIWLNFRRPSLQ

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70789; Mature: 70658

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKIQTDTTNLGSREQAILEKYDRESVTRQTNPLQKGLITVIAVCYSLFHLYITFYPLP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLQRAIHVGVGAILIFLIYPATRKHRQGGVAWYDWLWVGIASLGMGYLVHQYNDIMTIR
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
GGIPNTADIVVAILTVLAVLEVTRRITGLILVLFALLFLAYPFVSSMDFIPDRLLTRPYD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC
VGDIFGQLYLKTEGLYSSAIGASVTFIFLFILFGAFLAKSGMGQLFNDIALAIAGDKQGG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCC
PAKVAVISSGFMGSINGAAVANVVSTGAFTIPLMKKIGYHRNFAGAVEASASVGGQILPP
CEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCH
IMGASAFIMAETTGVSYGTIALAALFPAVLYYLGVIAQVHFRAGKQNLKGLSKDQLPQFK
HHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHH
AIMKARGHMLLPIVALVWFLIESVPIGYAAVYTIGITVLISQLRKETRMGIKEIIAALED
HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
GAKQSLSVMAACAVVGIVIGVVNLTSFGTVITSSIVTLGAGSLLFTLFLTMIASMILGMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
LPSIPAYIITATMAAPALATFNVPVLVAHMFVFYFGIFANITPPVALAAFAGAGIAQGDP
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
MKTGWQSLRLAVAGFIVPFMFVYNPNMLMIDVSNVAVTAKTFPLPHIVDIISVLISSTIG
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHH
VLGLSAATEGYFKQAMPIWQRVILAIGSFMLIIPELMTDLIGIAVVAVMIWLNFRRPSLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDKIQTDTTNLGSREQAILEKYDRESVTRQTNPLQKGLITVIAVCYSLFHLYITFYPLP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLQRAIHVGVGAILIFLIYPATRKHRQGGVAWYDWLWVGIASLGMGYLVHQYNDIMTIR
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
GGIPNTADIVVAILTVLAVLEVTRRITGLILVLFALLFLAYPFVSSMDFIPDRLLTRPYD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC
VGDIFGQLYLKTEGLYSSAIGASVTFIFLFILFGAFLAKSGMGQLFNDIALAIAGDKQGG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCC
PAKVAVISSGFMGSINGAAVANVVSTGAFTIPLMKKIGYHRNFAGAVEASASVGGQILPP
CEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCH
IMGASAFIMAETTGVSYGTIALAALFPAVLYYLGVIAQVHFRAGKQNLKGLSKDQLPQFK
HHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHH
AIMKARGHMLLPIVALVWFLIESVPIGYAAVYTIGITVLISQLRKETRMGIKEIIAALED
HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
GAKQSLSVMAACAVVGIVIGVVNLTSFGTVITSSIVTLGAGSLLFTLFLTMIASMILGMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
LPSIPAYIITATMAAPALATFNVPVLVAHMFVFYFGIFANITPPVALAAFAGAGIAQGDP
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
MKTGWQSLRLAVAGFIVPFMFVYNPNMLMIDVSNVAVTAKTFPLPHIVDIISVLISSTIG
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHH
VLGLSAATEGYFKQAMPIWQRVILAIGSFMLIIPELMTDLIGIAVVAVMIWLNFRRPSLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA