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The map label for this gene is 15603408

Identifier: 15603408

GI number: 15603408

Start: 1747090

End: 1747800

Strand: Reverse

Name: 15603408

Synonym: PM1543

Alternate gene names: NA

Gene position: 1747800-1747090 (Counterclockwise)

Preceding gene: 15603409

Following gene: 15603407

Centisome position: 77.42

GC content: 34.88

Gene sequence:

>711_bases
ATGGAGTTTAAAATGCAAAAAATTATCTTAGGAATGCTTGTTGTTACAGCAAGTAATGCGATGGCACTAAACAATAATTT
CAATGTGTACGGAAAAGTTGGGGTGGATCTCGTTTCTCGTTTTGATACCATTGCTATTACACGACATGATACTCAAGCCC
CGAAAAACACAGCACGTTTCTCACCAAGTCTCTTTGCAGAAATCACATATAATGCAACACCTAAGACTGAAGTCGGATTA
GGTTTAGGTTATATTCATCGTAAAAGCAGTCATCACATAATTAAACAAAAAACAGATAATGGAAATCGTGCATTAATTGA
TGTTATAGAAGAATATCCAGTTAATCGGTACAATTCCATACCACTTTATTTCCTTGTTAAACACAATTTTTATAGTCAAT
CGGATCTCCGCTCTTACCTCAAAGTTGACTTTGGTTATGCATTCAATAAAACAAAATCAACGCTCAATTTAACAGAATCA
ACTGATGCTGCTGGCAATAATCAGTATTATATTGAAAAACATAACATCTCGCTTAATGTAGAAAATGGTAACTACTACGG
CATCGGATTTGGCGTTGAGTATAAGAATATCCTTGCTGAAATTGCTTATACACATACGGACTCACGTTTAACTTATTCAT
CTAAACTCATTCGAGGAGAATCAGAATATAAAAATGATGCCCTCCGCTTCTCAGTAGGTTATCGATTCTAA

Upstream 100 bases:

>100_bases
AAACGTATTGTTTTAAATCAATAAATGATTCAGAAACAAACTGAACTCGATTGTTTTTTTAGTGCTAATAAGTATAATTC
TCAGCCGTTTATCAACTAAA

Downstream 100 bases:

>100_bases
CCTTATTACGTTGAAAACCGTTCTATTATCGAACGGTTTTTTTCTTTGACATAAATCATATAACGTTAAAAATTTTTCGC
CATTTTTCAAAATTTTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MEFKMQKIILGMLVVTASNAMALNNNFNVYGKVGVDLVSRFDTIAITRHDTQAPKNTARFSPSLFAEITYNATPKTEVGL
GLGYIHRKSSHHIIKQKTDNGNRALIDVIEEYPVNRYNSIPLYFLVKHNFYSQSDLRSYLKVDFGYAFNKTKSTLNLTES
TDAAGNNQYYIEKHNISLNVENGNYYGIGFGVEYKNILAEIAYTHTDSRLTYSSKLIRGESEYKNDALRFSVGYRF

Sequences:

>Translated_236_residues
MEFKMQKIILGMLVVTASNAMALNNNFNVYGKVGVDLVSRFDTIAITRHDTQAPKNTARFSPSLFAEITYNATPKTEVGL
GLGYIHRKSSHHIIKQKTDNGNRALIDVIEEYPVNRYNSIPLYFLVKHNFYSQSDLRSYLKVDFGYAFNKTKSTLNLTES
TDAAGNNQYYIEKHNISLNVENGNYYGIGFGVEYKNILAEIAYTHTDSRLTYSSKLIRGESEYKNDALRFSVGYRF
>Mature_236_residues
MEFKMQKIILGMLVVTASNAMALNNNFNVYGKVGVDLVSRFDTIAITRHDTQAPKNTARFSPSLFAEITYNATPKTEVGL
GLGYIHRKSSHHIIKQKTDNGNRALIDVIEEYPVNRYNSIPLYFLVKHNFYSQSDLRSYLKVDFGYAFNKTKSTLNLTES
TDAAGNNQYYIEKHNISLNVENGNYYGIGFGVEYKNILAEIAYTHTDSRLTYSSKLIRGESEYKNDALRFSVGYRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1543_PASMU (Q9CKR3)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246482.1
- GeneID:   1244890
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1543
- NMPDR:   fig|272843.1.peg.1544
- HOGENOM:   HBG495800
- OMA:   TIAITRH
- ProtClustDB:   CLSK509104
- BioCyc:   PMUL272843:PM1543-MONOMER
- InterPro:   IPR011250
- Gene3D:   G3DSA:2.40.160.20

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26881; Mature: 26881

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKMQKIILGMLVVTASNAMALNNNFNVYGKVGVDLVSRFDTIAITRHDTQAPKNTARF
CCCHHHHHHHHHHEEECCCEEEECCCCEEEEEECHHHHHCCCEEEEEECCCCCCCCHHCC
SPSLFAEITYNATPKTEVGLGLGYIHRKSSHHIIKQKTDNGNRALIDVIEEYPVNRYNSI
CCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEHHHCCCCCCCCC
PLYFLVKHNFYSQSDLRSYLKVDFGYAFNKTKSTLNLTESTDAAGNNQYYIEKHNISLNV
CEEEEEECCCCCHHHHHHHHEECCCEEECCCCCEEEECCCCCCCCCCEEEEEECCEEEEE
ENGNYYGIGFGVEYKNILAEIAYTHTDSRLTYSSKLIRGESEYKNDALRFSVGYRF
ECCCEEEEEECCHHHHHHHHHHHCCCCCEEEEHHHEECCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MEFKMQKIILGMLVVTASNAMALNNNFNVYGKVGVDLVSRFDTIAITRHDTQAPKNTARF
CCCHHHHHHHHHHEEECCCEEEECCCCEEEEEECHHHHHCCCEEEEEECCCCCCCCHHCC
SPSLFAEITYNATPKTEVGLGLGYIHRKSSHHIIKQKTDNGNRALIDVIEEYPVNRYNSI
CCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEHHHCCCCCCCCC
PLYFLVKHNFYSQSDLRSYLKVDFGYAFNKTKSTLNLTESTDAAGNNQYYIEKHNISLNV
CEEEEEECCCCCHHHHHHHHEECCCEEECCCCCEEEECCCCCCCCCCEEEEEECCEEEEE
ENGNYYGIGFGVEYKNILAEIAYTHTDSRLTYSSKLIRGESEYKNDALRFSVGYRF
ECCCEEEEEECCHHHHHHHHHHHCCCCCEEEEHHHEECCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100