| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is gpmA [H]
Identifier: 15603371
GI number: 15603371
Start: 1704487
End: 1705170
Strand: Reverse
Name: gpmA [H]
Synonym: PM1506
Alternate gene names: 15603371
Gene position: 1705170-1704487 (Counterclockwise)
Preceding gene: 15603375
Following gene: 15603366
Centisome position: 75.53
GC content: 41.52
Gene sequence:
>684_bases ATGGAATTGGTCTTTATTCGCCACGGTTTCAGTGAGTGGAATGCCAAAAACCTATTCACAGGTTGGCGTGATGTCAACTT AACAGAACGCGGTATCGAAGAAGCAAAATCAGCAGGCAAAAAATTACTCGAAGCCGGTTTTGAATTTGATATTGCTTTCA CGTCTGTTTTAACGCGTGCAATTAAAACCTGTAACATTGTGTTAGAAGAATCTAACCAACTTTGGATCCCACAAGTGAAA AACTGGCGTTTAAATGAGCGTCATTACGGTGCATTACAAGGCTTAGATAAAAAAGCCACTGCAGAACAATATGGTGATGA GCAAGTCCATATTTGGCGTCGTTCTTACGATATTTCTCCTCCAGATTTAGATCCACAAGATCCTCATTCTGCCCATAACG ACCGTCGTTATGCTCACTTACCAAGCGATGTGGTACCTGATGCAGAAAACTTAAAAATCACCCTTGAGCGTGTTTTACCT TTCTGGGAAGACCAAATTGCCCCAGCTTTACTGGCGGGTAAACGTGTCCTTGTGACAGCACACGGCAACTCATTACGTGC ATTGGCAAAACACATTGAAGGCATTTCTGATGCAGACATCATGGATTTAGAAATCCCAACCGGTCAGCCATTAGTGTACA AATTAGATGACAATTTAAAAGTCGTGGAAAAATACTACCTTTAA
Upstream 100 bases:
>100_bases TTTGCGACAGATCAGAAAAGCAAAGTATTTCCCTTTTAAAGCCGGCTGTTTTTTGCTATAACTTGCCATAGTTTTTTTAT TAACATTGAGGAGATTTTTT
Downstream 100 bases:
>100_bases TTGAAATCAAGAAAAATCGGGGCAATTGTCCCGATTTTTTTATGAAACTCAACCTAAAAAAAGTGCGGTCCTTTTTACCG CACTTTTTTATCCACAATCG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MELVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGKKLLEAGFEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQVK NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISPPDLDPQDPHSAHNDRRYAHLPSDVVPDAENLKITLERVLP FWEDQIAPALLAGKRVLVTAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYKLDDNLKVVEKYYL
Sequences:
>Translated_227_residues MELVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGKKLLEAGFEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQVK NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISPPDLDPQDPHSAHNDRRYAHLPSDVVPDAENLKITLERVLP FWEDQIAPALLAGKRVLVTAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYKLDDNLKVVEKYYL >Mature_227_residues MELVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGKKLLEAGFEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQVK NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISPPDLDPQDPHSAHNDRRYAHLPSDVVPDAENLKITLERVLP FWEDQIAPALLAGKRVLVTAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYKLDDNLKVVEKYYL
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=220, Percent_Identity=53.6363636363636, Blast_Score=255, Evalue=3e-68, Organism=Homo sapiens, GI4505753, Length=224, Percent_Identity=54.0178571428571, Blast_Score=244, Evalue=5e-65, Organism=Homo sapiens, GI4502445, Length=225, Percent_Identity=49.7777777777778, Blast_Score=241, Evalue=3e-64, Organism=Homo sapiens, GI40353764, Length=225, Percent_Identity=49.7777777777778, Blast_Score=241, Evalue=3e-64, Organism=Homo sapiens, GI71274132, Length=224, Percent_Identity=52.2321428571429, Blast_Score=233, Evalue=8e-62, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=53.416149068323, Blast_Score=166, Evalue=2e-41, Organism=Escherichia coli, GI1786970, Length=226, Percent_Identity=53.0973451327434, Blast_Score=262, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6322697, Length=227, Percent_Identity=53.3039647577093, Blast_Score=257, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6324516, Length=276, Percent_Identity=31.5217391304348, Blast_Score=131, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6320183, Length=284, Percent_Identity=32.7464788732394, Blast_Score=130, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6324857, Length=189, Percent_Identity=25.9259259259259, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646216, Length=221, Percent_Identity=52.0361990950226, Blast_Score=236, Evalue=1e-62, Organism=Drosophila melanogaster, GI85725270, Length=224, Percent_Identity=52.6785714285714, Blast_Score=228, Evalue=4e-60, Organism=Drosophila melanogaster, GI85725272, Length=224, Percent_Identity=52.6785714285714, Blast_Score=228, Evalue=4e-60, Organism=Drosophila melanogaster, GI24650981, Length=224, Percent_Identity=52.6785714285714, Blast_Score=228, Evalue=4e-60, Organism=Drosophila melanogaster, GI28571815, Length=217, Percent_Identity=39.63133640553, Blast_Score=174, Evalue=6e-44, Organism=Drosophila melanogaster, GI24648979, Length=217, Percent_Identity=39.63133640553, Blast_Score=174, Evalue=6e-44, Organism=Drosophila melanogaster, GI28571817, Length=217, Percent_Identity=39.63133640553, Blast_Score=174, Evalue=6e-44,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 25955; Mature: 25955
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGKKLLEAGFEFDIAFTSVLTRA CEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH IKTCNIVLEESNQLWIPQVKNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISP HHHHEEEEECCCCEECCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCC PDLDPQDPHSAHNDRRYAHLPSDVVPDAENLKITLERVLPFWEDQIAPALLAGKRVLVTA CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHCCCEEEEEE HGNSLRALAKHIEGISDADIMDLEIPTGQPLVYKLDDNLKVVEKYYL CCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCEEHHHHCC >Mature Secondary Structure MELVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGKKLLEAGFEFDIAFTSVLTRA CEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH IKTCNIVLEESNQLWIPQVKNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISP HHHHEEEEECCCCEECCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCC PDLDPQDPHSAHNDRRYAHLPSDVVPDAENLKITLERVLPFWEDQIAPALLAGKRVLVTA CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHCCCEEEEEE HGNSLRALAKHIEGISDADIMDLEIPTGQPLVYKLDDNLKVVEKYYL CCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA