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The map label for this gene is vacJ [C]

Identifier: 15603366

GI number: 15603366

Start: 1697255

End: 1697995

Strand: Reverse

Name: vacJ [C]

Synonym: PM1501

Alternate gene names: 15603366

Gene position: 1697995-1697255 (Counterclockwise)

Preceding gene: 15603371

Following gene: 15603365

Centisome position: 75.22

GC content: 39.68

Gene sequence:

>741_bases
ATGAAAAAAACCAAACGTCTCGTAACCTTGTTCTTAGCTGCCACAGTATTAAGTGGCTGTGCGACTATTGATTCAAAAAC
AGGTGAGCGTAAAGATCCATTAGAAGGCTTTAACCGCACAATGTGGGATTTTAACTATAAAGTAGTTGATCCTTATCTGT
TAAAACCTGTTGCGACAGGTTGGAAAGAGTATGTTCCAACACCTGTAAAATCCGGTTTAACGAATGTTGCGAATAACCTA
GATGAACCAGCCAGTTTTGTAAACCGCTTACTTTCAGGTGAATTTAAAAAAGCGATGACTCACTTCAATCGTTTTTGGAT
TAATACGGTATTTGGTATCGGTGGGTTAATTGATGTGGCAAGCTATAGCCCACCGTTAAGAGTAGAAAATCAAAGCCGTT
TTGGTGATACACTCGGACGCTATGGGGTTGAAACTGGTTCTTATGTCATGCTACCACTTTATGGACCAGCCACACCACGC
CAAGACATTGGTAATTTGGCGGATACCACCTACCCAATGCTATCTTTATTAGGACCTTGGTCACTCTTAAAATCTGGCGT
ACAAATTATTGACGGTCGCGCTAAAGCATTAGATAAAGATGCCTTATTAGAACAATCACAAGATCCGTATATTACTTTCC
GTGAAGCTTATTTCCAAAACCTTGAATATCGAGTGAAAGACGGCAAAGTAAGCACACCAAAACAGGATCTCGCTCAAGAT
ATCTTAAATGAAATTGATTAA

Upstream 100 bases:

>100_bases
ATACAAAAAAGTACACATTTTTTCCGCCACAATAAATTGTCTTGTAGTTATGCATTAACTTGCTAAAATGGTATTTCTTT
TCATCTTATAGAGAGCGGAT

Downstream 100 bases:

>100_bases
AAGGAATACATTATGGAAATGACATCGACACAACGTTTAATCTTGGCCAACCAATATAAATTAATGGGCTTATTAGATAG
TCAAAATGCACAAAAATATC

Product: VacJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKKTKRLVTLFLAATVLSGCATIDSKTGERKDPLEGFNRTMWDFNYKVVDPYLLKPVATGWKEYVPTPVKSGLTNVANNL
DEPASFVNRLLSGEFKKAMTHFNRFWINTVFGIGGLIDVASYSPPLRVENQSRFGDTLGRYGVETGSYVMLPLYGPATPR
QDIGNLADTTYPMLSLLGPWSLLKSGVQIIDGRAKALDKDALLEQSQDPYITFREAYFQNLEYRVKDGKVSTPKQDLAQD
ILNEID

Sequences:

>Translated_246_residues
MKKTKRLVTLFLAATVLSGCATIDSKTGERKDPLEGFNRTMWDFNYKVVDPYLLKPVATGWKEYVPTPVKSGLTNVANNL
DEPASFVNRLLSGEFKKAMTHFNRFWINTVFGIGGLIDVASYSPPLRVENQSRFGDTLGRYGVETGSYVMLPLYGPATPR
QDIGNLADTTYPMLSLLGPWSLLKSGVQIIDGRAKALDKDALLEQSQDPYITFREAYFQNLEYRVKDGKVSTPKQDLAQD
ILNEID
>Mature_246_residues
MKKTKRLVTLFLAATVLSGCATIDSKTGERKDPLEGFNRTMWDFNYKVVDPYLLKPVATGWKEYVPTPVKSGLTNVANNL
DEPASFVNRLLSGEFKKAMTHFNRFWINTVFGIGGLIDVASYSPPLRVENQSRFGDTLGRYGVETGSYVMLPLYGPATPR
QDIGNLADTTYPMLSLLGPWSLLKSGVQIIDGRAKALDKDALLEQSQDPYITFREAYFQNLEYRVKDGKVSTPKQDLAQD
ILNEID

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=246, Percent_Identity=48.3739837398374, Blast_Score=231, Evalue=3e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 27529; Mature: 27529

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTKRLVTLFLAATVLSGCATIDSKTGERKDPLEGFNRTMWDFNYKVVDPYLLKPVATG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHH
WKEYVPTPVKSGLTNVANNLDEPASFVNRLLSGEFKKAMTHFNRFWINTVFGIGGLIDVA
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYSPPLRVENQSRFGDTLGRYGVETGSYVMLPLYGPATPRQDIGNLADTTYPMLSLLGPW
CCCCCCEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHH
SLLKSGVQIIDGRAKALDKDALLEQSQDPYITFREAYFQNLEYRVKDGKVSTPKQDLAQD
HHHHHHHHHHCCHHHHCCHHHHHHCCCCCCEEHHHHHHHCCCEEECCCCCCCCHHHHHHH
ILNEID
HHHHCC
>Mature Secondary Structure
MKKTKRLVTLFLAATVLSGCATIDSKTGERKDPLEGFNRTMWDFNYKVVDPYLLKPVATG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHH
WKEYVPTPVKSGLTNVANNLDEPASFVNRLLSGEFKKAMTHFNRFWINTVFGIGGLIDVA
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYSPPLRVENQSRFGDTLGRYGVETGSYVMLPLYGPATPRQDIGNLADTTYPMLSLLGPW
CCCCCCEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHH
SLLKSGVQIIDGRAKALDKDALLEQSQDPYITFREAYFQNLEYRVKDGKVSTPKQDLAQD
HHHHHHHHHHCCHHHHCCHHHHHHCCCCCCEEHHHHHHHCCCEEECCCCCCCCHHHHHHH
ILNEID
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]