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The map label for this gene is ygbK [C]

Identifier: 15603230

GI number: 15603230

Start: 1555820

End: 1557061

Strand: Reverse

Name: ygbK [C]

Synonym: PM1365

Alternate gene names: 15603230

Gene position: 1557061-1555820 (Counterclockwise)

Preceding gene: 15603231

Following gene: 15603229

Centisome position: 68.97

GC content: 44.2

Gene sequence:

>1242_bases
ATGTTAGGTGTCATTGCAGATGATTTTACTGGTGCGAGTGATATTGCCAGTTTTCTAGTGGAAAATGGGCTTGCTACCGT
ACAGATGAATGGGGTGCCTAAGCAGTCGTTGACAGCGCCTGTGGATGCGATTGTGATCAGTTTAAAGTCACGTTCTAATC
CCGTTGATGAAGCCATCGCTCAATCTTTACAAGCACTACATTGGTTACAACAACAGGGCTGTACTCAGTTCTATTTTAAA
TATTGTTCCACCTTTGATAGTACAGCAAAAGGCAATATTGGTCCTGTGACGGATGCATTATTGGATGCGTTAAGCGCGGA
TTTCACAATTATTTGCCCAGCTTTACCGGTTAATGGTCGCACTATTTTTAATGGTTATCTGTTTGTTGGTGAGGTGCTGT
TGAATGAATCCGGTATGCAAAATCACCCGATTACGCCGATGAAAGATGCCAATTTAGTGCGCTTGATGGATCAACAAGCG
CGCGGGAAAACAGGACTTGTGCGCTATGCGGATCTGTTGAAAGGCAGTGACTATGTGAAATCGTGTTTTCGTACTTTACA
ACAACAAGGCTTCCGTTATGCAGTCGTGGATTCTGTCGATAATGATCAATTAGCTGTTTTGGCAGAAGCCATTACAGACT
TGAAATTGGTGACGGGGGGATCGGGATTAGCTGCTTATATGGCGGCGCGTGCCAGTGGTGGTCAGCATGGCGACAATGCG
TTATTGCCACCAAAAGGTAAAACGGTGGTGCTGTCAGGGTCTTGTTCTGTGATGACCAATAAACAAGTGGCGAAATATGC
AGAAAAAGCACCGCACTTTTATTTGGATGTTGAACAAAGCCTATCAAATCCTGCGTATGCCGATGTGCTAGCAAAATGGG
TTATTGCTCATTTAGATCACGATTTGGCGCCTATGGTGTATGCCACGGTATCACCCGATAAGCTCAAACAAATTCAAGCG
GAATTTGGTGTGGAGAAAGCTAGCCAAGCGATCGAAAACACATTTGCACAGCTTGCGCAAAAACTGAAAGCCGCTGGGGT
AGTGAACTTCATTACTGCGGGTGGAGAAACGTCAAGCATTGTGGTTCAGCAACTTGGTTTTACAGGCTTCCAAATCGGTA
AACAAATTGCTCCCGGAGTGCCTTGGTTAAAAGCATTAGATGAAGATATTTATCTTGCTTTGAAATCAGGGAATTTCGGG
ACAGAAGACTTTTTTGCTTTCGCACAAGGAATGTTGATATGA

Upstream 100 bases:

>100_bases
TTACGTCAGCCAGCAATGCGGGGTATGGCAAAGAAGATGATAGTGCGGTCATTAAGATTTTTAGTGGCATTGAATTACCA
CAGAAAAAAGGAGCGTGATT

Downstream 100 bases:

>100_bases
CAGAACTCGAACAAAAAAAAGAAATGGTGAATCTTGCGCGCTCATTATTTGAACGAGGCTATAGTGTGGGGGGCGCAGGA
AATTTGTCTGTACGTTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MLGVIADDFTGASDIASFLVENGLATVQMNGVPKQSLTAPVDAIVISLKSRSNPVDEAIAQSLQALHWLQQQGCTQFYFK
YCSTFDSTAKGNIGPVTDALLDALSADFTIICPALPVNGRTIFNGYLFVGEVLLNESGMQNHPITPMKDANLVRLMDQQA
RGKTGLVRYADLLKGSDYVKSCFRTLQQQGFRYAVVDSVDNDQLAVLAEAITDLKLVTGGSGLAAYMAARASGGQHGDNA
LLPPKGKTVVLSGSCSVMTNKQVAKYAEKAPHFYLDVEQSLSNPAYADVLAKWVIAHLDHDLAPMVYATVSPDKLKQIQA
EFGVEKASQAIENTFAQLAQKLKAAGVVNFITAGGETSSIVVQQLGFTGFQIGKQIAPGVPWLKALDEDIYLALKSGNFG
TEDFFAFAQGMLI

Sequences:

>Translated_413_residues
MLGVIADDFTGASDIASFLVENGLATVQMNGVPKQSLTAPVDAIVISLKSRSNPVDEAIAQSLQALHWLQQQGCTQFYFK
YCSTFDSTAKGNIGPVTDALLDALSADFTIICPALPVNGRTIFNGYLFVGEVLLNESGMQNHPITPMKDANLVRLMDQQA
RGKTGLVRYADLLKGSDYVKSCFRTLQQQGFRYAVVDSVDNDQLAVLAEAITDLKLVTGGSGLAAYMAARASGGQHGDNA
LLPPKGKTVVLSGSCSVMTNKQVAKYAEKAPHFYLDVEQSLSNPAYADVLAKWVIAHLDHDLAPMVYATVSPDKLKQIQA
EFGVEKASQAIENTFAQLAQKLKAAGVVNFITAGGETSSIVVQQLGFTGFQIGKQIAPGVPWLKALDEDIYLALKSGNFG
TEDFFAFAQGMLI
>Mature_413_residues
MLGVIADDFTGASDIASFLVENGLATVQMNGVPKQSLTAPVDAIVISLKSRSNPVDEAIAQSLQALHWLQQQGCTQFYFK
YCSTFDSTAKGNIGPVTDALLDALSADFTIICPALPVNGRTIFNGYLFVGEVLLNESGMQNHPITPMKDANLVRLMDQQA
RGKTGLVRYADLLKGSDYVKSCFRTLQQQGFRYAVVDSVDNDQLAVLAEAITDLKLVTGGSGLAAYMAARASGGQHGDNA
LLPPKGKTVVLSGSCSVMTNKQVAKYAEKAPHFYLDVEQSLSNPAYADVLAKWVIAHLDHDLAPMVYATVSPDKLKQIQA
EFGVEKASQAIENTFAQLAQKLKAAGVVNFITAGGETSSIVVQQLGFTGFQIGKQIAPGVPWLKALDEDIYLALKSGNFG
TEDFFAFAQGMLI

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=382, Percent_Identity=56.5445026178011, Blast_Score=417, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 44244; Mature: 44244

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVIADDFTGASDIASFLVENGLATVQMNGVPKQSLTAPVDAIVISLKSRSNPVDEAIA
CCCEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHCCCHHHHEEEECCCCCCHHHHHH
QSLQALHWLQQQGCTQFYFKYCSTFDSTAKGNIGPVTDALLDALSADFTIICPALPVNGR
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCC
TIFNGYLFVGEVLLNESGMQNHPITPMKDANLVRLMDQQARGKTGLVRYADLLKGSDYVK
EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
SCFRTLQQQGFRYAVVDSVDNDQLAVLAEAITDLKLVTGGSGLAAYMAARASGGQHGDNA
HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCCCCCC
LLPPKGKTVVLSGSCSVMTNKQVAKYAEKAPHFYLDVEQSLSNPAYADVLAKWVIAHLDH
CCCCCCCEEEEECCCCEEECHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCC
DLAPMVYATVSPDKLKQIQAEFGVEKASQAIENTFAQLAQKLKAAGVVNFITAGGETSSI
CCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHH
VVQQLGFTGFQIGKQIAPGVPWLKALDEDIYLALKSGNFGTEDFFAFAQGMLI
HHHHHCCCHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLGVIADDFTGASDIASFLVENGLATVQMNGVPKQSLTAPVDAIVISLKSRSNPVDEAIA
CCCEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHCCCHHHHEEEECCCCCCHHHHHH
QSLQALHWLQQQGCTQFYFKYCSTFDSTAKGNIGPVTDALLDALSADFTIICPALPVNGR
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCC
TIFNGYLFVGEVLLNESGMQNHPITPMKDANLVRLMDQQARGKTGLVRYADLLKGSDYVK
EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
SCFRTLQQQGFRYAVVDSVDNDQLAVLAEAITDLKLVTGGSGLAAYMAARASGGQHGDNA
HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCCCCCC
LLPPKGKTVVLSGSCSVMTNKQVAKYAEKAPHFYLDVEQSLSNPAYADVLAKWVIAHLDH
CCCCCCCEEEEECCCCEEECHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCC
DLAPMVYATVSPDKLKQIQAEFGVEKASQAIENTFAQLAQKLKAAGVVNFITAGGETSSI
CCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHH
VVQQLGFTGFQIGKQIAPGVPWLKALDEDIYLALKSGNFGTEDFFAFAQGMLI
HHHHHCCCHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]