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The map label for this gene is ygbL [C]

Identifier: 15603229

GI number: 15603229

Start: 1555191

End: 1555823

Strand: Reverse

Name: ygbL [C]

Synonym: PM1364

Alternate gene names: 15603229

Gene position: 1555823-1555191 (Counterclockwise)

Preceding gene: 15603230

Following gene: 15603228

Centisome position: 68.92

GC content: 44.87

Gene sequence:

>633_bases
ATGACAGAACTCGAACAAAAAAAAGAAATGGTGAATCTTGCGCGCTCATTATTTGAACGAGGCTATAGTGTGGGGGGCGC
AGGAAATTTGTCTGTACGTTTAGATGAGAAACGTATTTTAGTCACGCCAACGGGCTCTTCTTTGGGGCGTTTAGAGGCGG
ACAGTCTCTCTGTATTGGATATGGAAGGCAACTTGTTATCGGGTAAGAAGCCCTCTAAGGAGTCTGTCTTTCATTTGGCG
ATGTATCACCAAAATCCGGCATGTCATGCCATTGTTCATTTACATTCAACTTATCTCACTGCCCTTTCGTGTTTAGAGGG
GCTCAATCCAGATAATGCGATGAAAGCATTCACACCCTACTATGTGATGCGTGTCGGCAAGCTTCCGGTGATTCCTTATT
ATCGCCCCGGTGATACGAATATTGCGCGTGAACTGAGTGAACGCGCATTACTGAGCAAAGCGTTTTTATTGGCCAATCAC
GGTGTGGTTGTAACGGGAACCGATTTGGTTGATGCCGTGGACAATACCGAAGAATTAGAGGAAACCGCAAAATTGTATTT
CCTCTTAAAAGGCCAACAAGTTCGTTATCTGACCGATGACGAAGTGAAAGATCTCGAAAAGAGGGGAAAATAG

Upstream 100 bases:

>100_bases
TGCCTTGGTTAAAAGCATTAGATGAAGATATTTATCTTGCTTTGAAATCAGGGAATTTCGGGACAGAAGACTTTTTTGCT
TTCGCACAAGGAATGTTGAT

Downstream 100 bases:

>100_bases
TATGCCAAAATTTGCTGCAAATTTAACCATGATGTTTACTGAAGTGCCTTTTTTAGATCGTTTTGAAGCGGCGTCGAAAG
CGGGCTTTAAATATGTGGAA

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTELEQKKEMVNLARSLFERGYSVGGAGNLSVRLDEKRILVTPTGSSLGRLEADSLSVLDMEGNLLSGKKPSKESVFHLA
MYHQNPACHAIVHLHSTYLTALSCLEGLNPDNAMKAFTPYYVMRVGKLPVIPYYRPGDTNIARELSERALLSKAFLLANH
GVVVTGTDLVDAVDNTEELEETAKLYFLLKGQQVRYLTDDEVKDLEKRGK

Sequences:

>Translated_210_residues
MTELEQKKEMVNLARSLFERGYSVGGAGNLSVRLDEKRILVTPTGSSLGRLEADSLSVLDMEGNLLSGKKPSKESVFHLA
MYHQNPACHAIVHLHSTYLTALSCLEGLNPDNAMKAFTPYYVMRVGKLPVIPYYRPGDTNIARELSERALLSKAFLLANH
GVVVTGTDLVDAVDNTEELEETAKLYFLLKGQQVRYLTDDEVKDLEKRGK
>Mature_209_residues
TELEQKKEMVNLARSLFERGYSVGGAGNLSVRLDEKRILVTPTGSSLGRLEADSLSVLDMEGNLLSGKKPSKESVFHLAM
YHQNPACHAIVHLHSTYLTALSCLEGLNPDNAMKAFTPYYVMRVGKLPVIPYYRPGDTNIARELSERALLSKAFLLANHG
VVVTGTDLVDAVDNTEELEETAKLYFLLKGQQVRYLTDDEVKDLEKRGK

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=199, Percent_Identity=55.7788944723618, Blast_Score=237, Evalue=4e-64,
Organism=Escherichia coli, GI1789164, Length=203, Percent_Identity=32.0197044334975, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23329; Mature: 23198

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELEQKKEMVNLARSLFERGYSVGGAGNLSVRLDEKRILVTPTGSSLGRLEADSLSVLD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCEEEEE
MEGNLLSGKKPSKESVFHLAMYHQNPACHAIVHLHSTYLTALSCLEGLNPDNAMKAFTPY
ECCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHH
YVMRVGKLPVIPYYRPGDTNIARELSERALLSKAFLLANHGVVVTGTDLVDAVDNTEELE
HHEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCHHHHH
ETAKLYFLLKGQQVRYLTDDEVKDLEKRGK
HHHHEEEEECCCEEEEECCHHHHHHHHCCC
>Mature Secondary Structure 
TELEQKKEMVNLARSLFERGYSVGGAGNLSVRLDEKRILVTPTGSSLGRLEADSLSVLD
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCEEEEE
MEGNLLSGKKPSKESVFHLAMYHQNPACHAIVHLHSTYLTALSCLEGLNPDNAMKAFTPY
ECCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHH
YVMRVGKLPVIPYYRPGDTNIARELSERALLSKAFLLANHGVVVTGTDLVDAVDNTEELE
HHEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCHHHHH
ETAKLYFLLKGQQVRYLTDDEVKDLEKRGK
HHHHEEEEECCCEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]