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The map label for this gene is yibD [C]

Identifier: 15603171

GI number: 15603171

Start: 1500842

End: 1501606

Strand: Direct

Name: yibD [C]

Synonym: PM1306

Alternate gene names: 15603171

Gene position: 1500842-1501606 (Clockwise)

Preceding gene: 15603168

Following gene: 15603172

Centisome position: 66.48

GC content: 42.35

Gene sequence:

>765_bases
ATGCCAACACTTAGCGTTGCGATGATTGTTAAAAATGAAGCCGAGCATTTAGCACAATGTTTAGATACAGTGAAAGATTG
GGTGGATGACATTGTGATTTTAGATTCGGGGAGTACGGACAACACAAAAGAAATTGCGTTAAGTTATGGTGCAAAGTTCT
ATGCGCATTGTGAGTGGCCAGGTTTTGGGCGCCAACGTCAAATCGCGCAACAATATGTGACTACTGATTACGTCTTATGG
CTAGATGCGGATGAACGTGTTACGCCAGAATTGCGTGAGTCTATTCAACGCGCGGTCGCAAAAAATGAAAAAAATGTGGT
GTATAAAATTTCACGTTTAAGTGAAGTATTTGGACGCAAAATTCGCCACTCTAACTGGTATCCTGATTTTGTCTTGCGCC
TATATCCAACGGCACTGACACAATATAATGATGAACCGGTGCATGAAAAGGTCATGGTGCCGAGCCATGCAAAAGTGGAA
AAATTAGCTGGGGATTTAGAGCATTACACTTATAAAGATATGCACCACTACTTAGTGAAATCTGCGGGTTATGCTAAAGC
TTGGGCAGAAAAACGGGAAAAAGCGGGTAAAAAAGGCAGTCTTTTGGCTGCGTTCACTCATGCGATTGGCTGTTTTGCTA
AGATGTATATTTTCAATGCGGGTTTCCTTGACGGTAAACAAGGCTTACTCCTTGCCGTCCTCTCCGCCCATTCGACCTTT
GTCAAATATGCAGACTTATGGGTTAGAACACAAACGAAAAAGTAA

Upstream 100 bases:

>100_bases
ATAGACGAAACGTAACATAGCATAAATATTCGGTTATGTTAAAATGACAGACATTGCCCTTAGTATAAACTGTTGCACTC
AAGACATAAAGGATTAAAGT

Downstream 100 bases:

>100_bases
TTTAAATTCAGAGAGCAGCACAAGGATTTTCCTTGTGCTTTTTTATGCGACATTTCTCACAAAAAACACTTTTAATTCCT
TGGTTTGACGTGAAGTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPTLSVAMIVKNEAEHLAQCLDTVKDWVDDIVILDSGSTDNTKEIALSYGAKFYAHCEWPGFGRQRQIAQQYVTTDYVLW
LDADERVTPELRESIQRAVAKNEKNVVYKISRLSEVFGRKIRHSNWYPDFVLRLYPTALTQYNDEPVHEKVMVPSHAKVE
KLAGDLEHYTYKDMHHYLVKSAGYAKAWAEKREKAGKKGSLLAAFTHAIGCFAKMYIFNAGFLDGKQGLLLAVLSAHSTF
VKYADLWVRTQTKK

Sequences:

>Translated_254_residues
MPTLSVAMIVKNEAEHLAQCLDTVKDWVDDIVILDSGSTDNTKEIALSYGAKFYAHCEWPGFGRQRQIAQQYVTTDYVLW
LDADERVTPELRESIQRAVAKNEKNVVYKISRLSEVFGRKIRHSNWYPDFVLRLYPTALTQYNDEPVHEKVMVPSHAKVE
KLAGDLEHYTYKDMHHYLVKSAGYAKAWAEKREKAGKKGSLLAAFTHAIGCFAKMYIFNAGFLDGKQGLLLAVLSAHSTF
VKYADLWVRTQTKK
>Mature_253_residues
PTLSVAMIVKNEAEHLAQCLDTVKDWVDDIVILDSGSTDNTKEIALSYGAKFYAHCEWPGFGRQRQIAQQYVTTDYVLWL
DADERVTPELRESIQRAVAKNEKNVVYKISRLSEVFGRKIRHSNWYPDFVLRLYPTALTQYNDEPVHEKVMVPSHAKVEK
LAGDLEHYTYKDMHHYLVKSAGYAKAWAEKREKAGKKGSLLAAFTHAIGCFAKMYIFNAGFLDGKQGLLLAVLSAHSTFV
KYADLWVRTQTKK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 28995; Mature: 28864

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLSVAMIVKNEAEHLAQCLDTVKDWVDDIVILDSGSTDNTKEIALSYGAKFYAHCEWP
CCCCEEEHEECCCHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCEEEEEECCC
GFGRQRQIAQQYVTTDYVLWLDADERVTPELRESIQRAVAKNEKNVVYKISRLSEVFGRK
CCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IRHSNWYPDFVLRLYPTALTQYNDEPVHEKVMVPSHAKVEKLAGDLEHYTYKDMHHYLVK
HHCCCCCHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
SAGYAKAWAEKREKAGKKGSLLAAFTHAIGCFAKMYIFNAGFLDGKQGLLLAVLSAHSTF
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
VKYADLWVRTQTKK
HHHHHHHEEECCCC
>Mature Secondary Structure 
PTLSVAMIVKNEAEHLAQCLDTVKDWVDDIVILDSGSTDNTKEIALSYGAKFYAHCEWP
CCCEEEHEECCCHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCEEEEEECCC
GFGRQRQIAQQYVTTDYVLWLDADERVTPELRESIQRAVAKNEKNVVYKISRLSEVFGRK
CCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IRHSNWYPDFVLRLYPTALTQYNDEPVHEKVMVPSHAKVEKLAGDLEHYTYKDMHHYLVK
HHCCCCCHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
SAGYAKAWAEKREKAGKKGSLLAAFTHAIGCFAKMYIFNAGFLDGKQGLLLAVLSAHSTF
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
VKYADLWVRTQTKK
HHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]