| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yoaT [H]
Identifier: 15603037
GI number: 15603037
Start: 1367079
End: 1367924
Strand: Direct
Name: yoaT [H]
Synonym: PM1172
Alternate gene names: 15603037
Gene position: 1367079-1367924 (Clockwise)
Preceding gene: 15603035
Following gene: 15603040
Centisome position: 60.56
GC content: 35.58
Gene sequence:
>846_bases ATGCTAAATAAAATAGATAGTTGGCTCATTCAACACCCCCAAACTCAGCATCTCACGGGTATAAAACGATTCAGTATAGA ATTTTTATTTTTTGGCTTAAAAGAAATTCGCGCCTGCCTATTTGCAGGTTTATTCTTTATCGCCATGTTTATCACACCAA AAGCAGGTTTCTTAGGGCTACCTCGTTATGATGTACTTCTAATTTTTGCGATTTTACTACAAGTTATCATGTTTTATACA AAATTTGAAACACTAGATGAAATCAAATCCATTACACTATTTCATCTTATTGGCTTCGCACTAGAATTGTTTAAAACCTC AAGCAGTATCCAATCTTGGTCCTATCCTGATTTTGCTTACAGTAAAATCTATGGCGTCCCCTTATTTACAGGTTTTATGT ATGCTGCAGTAGGTAGTTATATCATCCAAGCTTGGCGTTTATTTGACCTCAAAATTAAAAGTCACCCACCGTATTTTTTA TCCACATTAACTGCAATTCTTATTTACCTAAATTTTTTCACTCATCATTATATTGGTGATTATCGCTGGTATTTAGCTGT TTTTGCTTTAGGGTTATATGCGCGTACCATCGTATATTTCACCCCTTACGATAAACCACGGAAAATGCCATTATTGTTTG CATTTATGCTAATAGGTTTCTTTATTTGGCTAGCTGAAAATATGGGAACATTTATTGGCATCTGGCGCTACCCTAATCAA ATTGGAGCATGGTCAATGGTACACGTCAGTAAATGGAGTGCGTGGGCGCTATTAGTTATCATGACCTTTACTATCGTAGC GAACTTAAAACACATCAAAAAAAGTATTCGCGTTTCACGAGACTAA
Upstream 100 bases:
>100_bases TAACAACCGTTCAATCGGTTGTTTTTTAATCAAAAAAAGAACAATTCATTGATTTTCTCTTTTATAATAAACGTCTTTCG CAATATAAATTCAGATAAAA
Downstream 100 bases:
>100_bases TGCGACTAAAAAAAGACCGCGCTTAATCGCACGGTCTTTAAAAATAAGCATGTTCAGCTAGTGAGTGCTAGTACTGGTTG TCGTACGACTTGCACGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MLNKIDSWLIQHPQTQHLTGIKRFSIEFLFFGLKEIRACLFAGLFFIAMFITPKAGFLGLPRYDVLLIFAILLQVIMFYT KFETLDEIKSITLFHLIGFALELFKTSSSIQSWSYPDFAYSKIYGVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHPPYFL STLTAILIYLNFFTHHYIGDYRWYLAVFALGLYARTIVYFTPYDKPRKMPLLFAFMLIGFFIWLAENMGTFIGIWRYPNQ IGAWSMVHVSKWSAWALLVIMTFTIVANLKHIKKSIRVSRD
Sequences:
>Translated_281_residues MLNKIDSWLIQHPQTQHLTGIKRFSIEFLFFGLKEIRACLFAGLFFIAMFITPKAGFLGLPRYDVLLIFAILLQVIMFYT KFETLDEIKSITLFHLIGFALELFKTSSSIQSWSYPDFAYSKIYGVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHPPYFL STLTAILIYLNFFTHHYIGDYRWYLAVFALGLYARTIVYFTPYDKPRKMPLLFAFMLIGFFIWLAENMGTFIGIWRYPNQ IGAWSMVHVSKWSAWALLVIMTFTIVANLKHIKKSIRVSRD >Mature_281_residues MLNKIDSWLIQHPQTQHLTGIKRFSIEFLFFGLKEIRACLFAGLFFIAMFITPKAGFLGLPRYDVLLIFAILLQVIMFYT KFETLDEIKSITLFHLIGFALELFKTSSSIQSWSYPDFAYSKIYGVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHPPYFL STLTAILIYLNFFTHHYIGDYRWYLAVFALGLYARTIVYFTPYDKPRKMPLLFAFMLIGFFIWLAENMGTFIGIWRYPNQ IGAWSMVHVSKWSAWALLVIMTFTIVANLKHIKKSIRVSRD
Specific function: Unknown
COG id: COG3739
COG function: function code S; Uncharacterized integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008535 [H]
Pfam domain/function: PF05675 DUF817 [H]
EC number: NA
Molecular weight: Translated: 32880; Mature: 32880
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKIDSWLIQHPQTQHLTGIKRFSIEFLFFGLKEIRACLFAGLFFIAMFITPKAGFLGL CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PRYDVLLIFAILLQVIMFYTKFETLDEIKSITLFHLIGFALELFKTSSSIQSWSYPDFAY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SKIYGVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHPPYFLSTLTAILIYLNFFTHHYIGD HHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH YRWYLAVFALGLYARTIVYFTPYDKPRKMPLLFAFMLIGFFIWLAENMGTFIGIWRYPNQ HHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC IGAWSMVHVSKWSAWALLVIMTFTIVANLKHIKKSIRVSRD CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNKIDSWLIQHPQTQHLTGIKRFSIEFLFFGLKEIRACLFAGLFFIAMFITPKAGFLGL CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PRYDVLLIFAILLQVIMFYTKFETLDEIKSITLFHLIGFALELFKTSSSIQSWSYPDFAY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SKIYGVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHPPYFLSTLTAILIYLNFFTHHYIGD HHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH YRWYLAVFALGLYARTIVYFTPYDKPRKMPLLFAFMLIGFFIWLAENMGTFIGIWRYPNQ HHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC IGAWSMVHVSKWSAWALLVIMTFTIVANLKHIKKSIRVSRD CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]