Click here to switch to the map view.

The map label for this gene is yaeB [C]

Identifier: 15603035

GI number: 15603035

Start: 1365745

End: 1366485

Strand: Direct

Name: yaeB [C]

Synonym: PM1170

Alternate gene names: 15603035

Gene position: 1365745-1366485 (Clockwise)

Preceding gene: 15603031

Following gene: 15603037

Centisome position: 60.5

GC content: 41.7

Gene sequence:

>741_bases
ATGTCTGACTTATCACTCCAGTTACACGCGATTGGTATTATTCATACCCCTTATAAAGAAAAATTTTCGGTACCGCGTCA
GCCCAACTTAGTCCAAGATGGCACAGGGATCCTAGAATTACTCCCCCCTTATAATCAAGCAGAAACAGTCAGAGGATTAG
CACAATTCAGTCACCTATGGTTGATTTTTCAATTTGATCGAGTCGCTACAGGAAAATGGCGTCCAACCGTTAGACCACCA
CGTTTAGGTGGTAATCAACGTGTGGGGGTGTTTGCCTCCCGTTCAACCCATAGACCCAATCCTTTAGGTTTATCGAAAGT
GGAGTTACGCCGAGTGGAATGTCAAAATGGCAAGGTTCTCCTTCATTTAGGGGCTGTAGATTTAGTCGATGGTACGCCGA
TTTTTGATATTAAGCCTTATCTTGCTTACGCTGACAGTGAACCTGAGGCAAAATCAGGTTTTGCTCAAGAAAAACCAGAA
TGTACATTGCAAGTCATATTTAGCGAACAAGCACAGAACGCATTACAAAAAATCGAAAAAAAACGACCGCACTTTAAGCG
CTTTATCACAGAGGTAATTGCCCAAGATCCGCGCCCAGCCTATCAAAAGATGCAATCATTAGAACGAGTTTATGGTATTA
GACTACATGAATTTAATATTCGTTGGAAAATGGAAGCAACAGAGGAACAGCAAGCACGCATTTTAGATATAGAAGAGGTA
GAAAAGAAAAAGTGCGACTAA

Upstream 100 bases:

>100_bases
AACATCACTTGTTAAAAGAAAAAGCACGATTTTTCACGTACTTTTACGTAAAATACTGAAATCAGTTTATTCTACACGAA
ATCTTCATACGAAGGAAAAT

Downstream 100 bases:

>100_bases
TATGACATTGTCGCACTGCACGGATTATTTCTTAATGATATTTTTTACATCGATATCGGTTTTATTCCACTCTTTATCGA
CTTTGCCTTGAATAATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSDLSLQLHAIGIIHTPYKEKFSVPRQPNLVQDGTGILELLPPYNQAETVRGLAQFSHLWLIFQFDRVATGKWRPTVRPP
RLGGNQRVGVFASRSTHRPNPLGLSKVELRRVECQNGKVLLHLGAVDLVDGTPIFDIKPYLAYADSEPEAKSGFAQEKPE
CTLQVIFSEQAQNALQKIEKKRPHFKRFITEVIAQDPRPAYQKMQSLERVYGIRLHEFNIRWKMEATEEQQARILDIEEV
EKKKCD

Sequences:

>Translated_246_residues
MSDLSLQLHAIGIIHTPYKEKFSVPRQPNLVQDGTGILELLPPYNQAETVRGLAQFSHLWLIFQFDRVATGKWRPTVRPP
RLGGNQRVGVFASRSTHRPNPLGLSKVELRRVECQNGKVLLHLGAVDLVDGTPIFDIKPYLAYADSEPEAKSGFAQEKPE
CTLQVIFSEQAQNALQKIEKKRPHFKRFITEVIAQDPRPAYQKMQSLERVYGIRLHEFNIRWKMEATEEQQARILDIEEV
EKKKCD
>Mature_245_residues
SDLSLQLHAIGIIHTPYKEKFSVPRQPNLVQDGTGILELLPPYNQAETVRGLAQFSHLWLIFQFDRVATGKWRPTVRPPR
LGGNQRVGVFASRSTHRPNPLGLSKVELRRVECQNGKVLLHLGAVDLVDGTPIFDIKPYLAYADSEPEAKSGFAQEKPEC
TLQVIFSEQAQNALQKIEKKRPHFKRFITEVIAQDPRPAYQKMQSLERVYGIRLHEFNIRWKMEATEEQQARILDIEEVE
KKKCD

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=138, Percent_Identity=37.6811594202899, Blast_Score=99, Evalue=3e-21,
Organism=Escherichia coli, GI1786393, Length=220, Percent_Identity=54.5454545454545, Blast_Score=270, Evalue=5e-74,
Organism=Drosophila melanogaster, GI45552503, Length=273, Percent_Identity=29.6703296703297, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24586408, Length=159, Percent_Identity=39.622641509434, Blast_Score=111, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 28222; Mature: 28091

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLSLQLHAIGIIHTPYKEKFSVPRQPNLVQDGTGILELLPPYNQAETVRGLAQFSHLW
CCCCEEEEEEEEEEECCCHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHEE
LIFQFDRVATGKWRPTVRPPRLGGNQRVGVFASRSTHRPNPLGLSKVELRRVECQNGKVL
EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHEEEEECCCCCEE
LHLGAVDLVDGTPIFDIKPYLAYADSEPEAKSGFAQEKPECTLQVIFSEQAQNALQKIEK
EEECCEEEECCCCEEECCCCEEECCCCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHH
KRPHFKRFITEVIAQDPRPAYQKMQSLERVYGIRLHEFNIRWKMEATEEQQARILDIEEV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCHHHEECCHHHH
EKKKCD
HHHCCC
>Mature Secondary Structure 
SDLSLQLHAIGIIHTPYKEKFSVPRQPNLVQDGTGILELLPPYNQAETVRGLAQFSHLW
CCCEEEEEEEEEEECCCHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHEE
LIFQFDRVATGKWRPTVRPPRLGGNQRVGVFASRSTHRPNPLGLSKVELRRVECQNGKVL
EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHEEEEECCCCCEE
LHLGAVDLVDGTPIFDIKPYLAYADSEPEAKSGFAQEKPECTLQVIFSEQAQNALQKIEK
EEECCEEEECCCCEEECCCCEEECCCCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHH
KRPHFKRFITEVIAQDPRPAYQKMQSLERVYGIRLHEFNIRWKMEATEEQQARILDIEEV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCHHHEECCHHHH
EKKKCD
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]