| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yfcZ [C]
Identifier: 15602935
GI number: 15602935
Start: 1260561
End: 1260887
Strand: Direct
Name: yfcZ [C]
Synonym: PM1070
Alternate gene names: 15602935
Gene position: 1260561-1260887 (Clockwise)
Preceding gene: 15602930
Following gene: 15602937
Centisome position: 55.84
GC content: 39.76
Gene sequence:
>327_bases GTGCTAAATATTTCATCAAAATTAGAAGGAAAAGGTATGAGTAAATTAAAATGCAATCCAGAAGAAGCCAAAGCCTGTTG CTGTGTTGATGTGGGTACTATTATTGATGGTTCTGACTGTACGGTAGAATTTGAACAAGTATATGCCTCGCAAGCACAAG CCGAAGAAGCACTGGCTTATTTAACTGAAAAAGCAAAAGCCGCAGAAAGCGATCCTTGCGAAATCACAAGTGATATTTCA GCCGTAGAACAAGGAGCCTTGCTTAAAGCACAATTTGTGTTTAGCTGCCAAGCAGAAGCCATGATTTTCCAACTTTCGAC ACGATAA
Upstream 100 bases:
>100_bases TAGCAAGAGTTCAGACCAGTCAGATAGATGTGTGAATGATTGATTTTACCTTACAAAAACAAGGGTTAAATTTTACGATC CCGCGGAACAGTGATAAAAT
Downstream 100 bases:
>100_bases AAAAGAAACGAAAAAAAACCGCACATTGATGTGCGGTTTTTTGTTGATTACAGTAACGTCCACAGCAATATAGCTAACAG TTGAGGCGAAATAATCCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MLNISSKLEGKGMSKLKCNPEEAKACCCVDVGTIIDGSDCTVEFEQVYASQAQAEEALAYLTEKAKAAESDPCEITSDIS AVEQGALLKAQFVFSCQAEAMIFQLSTR
Sequences:
>Translated_108_residues MLNISSKLEGKGMSKLKCNPEEAKACCCVDVGTIIDGSDCTVEFEQVYASQAQAEEALAYLTEKAKAAESDPCEITSDIS AVEQGALLKAQFVFSCQAEAMIFQLSTR >Mature_108_residues MLNISSKLEGKGMSKLKCNPEEAKACCCVDVGTIIDGSDCTVEFEQVYASQAQAEEALAYLTEKAKAAESDPCEITSDIS AVEQGALLKAQFVFSCQAEAMIFQLSTR
Specific function: Unknown
COG id: COG3691
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0381 family [H]
Homologues:
Organism=Escherichia coli, GI87082087, Length=92, Percent_Identity=50, Blast_Score=103, Evalue=3e-24, Organism=Escherichia coli, GI1790357, Length=84, Percent_Identity=39.2857142857143, Blast_Score=62, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005272 [H]
Pfam domain/function: PF04175 DUF406 [H]
EC number: NA
Molecular weight: Translated: 11581; Mature: 11581
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNISSKLEGKGMSKLKCNPEEAKACCCVDVGTIIDGSDCTVEFEQVYASQAQAEEALAY CCCCCCCCCCCCCCCEECCHHHHCEEEEEECCCEECCCCCEEEHHHHHHHHHHHHHHHHH LTEKAKAAESDPCEITSDISAVEQGALLKAQFVFSCQAEAMIFQLSTR HHHHHHCCCCCCCCCHHHHHHHHCCCEEEEHEEEECCCCEEEEEEECC >Mature Secondary Structure MLNISSKLEGKGMSKLKCNPEEAKACCCVDVGTIIDGSDCTVEFEQVYASQAQAEEALAY CCCCCCCCCCCCCCCEECCHHHHCEEEEEECCCEECCCCCEEEHHHHHHHHHHHHHHHHH LTEKAKAAESDPCEITSDISAVEQGALLKAQFVFSCQAEAMIFQLSTR HHHHHHCCCCCCCCCHHHHHHHHCCCEEEEHEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]