| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is galM [H]
Identifier: 15602899
GI number: 15602899
Start: 1216498
End: 1217529
Strand: Reverse
Name: galM [H]
Synonym: PM1034
Alternate gene names: 15602899
Gene position: 1217529-1216498 (Counterclockwise)
Preceding gene: 15602900
Following gene: 15602898
Centisome position: 53.93
GC content: 42.83
Gene sequence:
>1032_bases ATGCTGAGCAAGTGTACACTGGGTGTCGCACCAGATGGACAACCATTTCAATTAGTCACTTTATCCAATGCAAAAGGGAT GTCTATCCAAGTGATGGATTGGGGGGCGACATGGTTGTCTTGTAAGGTGCCTGTGCAAAATCAATTACGTGAAGTGTTAT TAGGCTGTCAGCTTGAGGATTACCCTAAGCAACAGGTTTATTTAGGTGCGACTATCGGGCGTTATGCGAATCGTATTGCG AATGGACGTTTTGTATTAAATGGGGTGCCTATTCAGTTACAGACGAATCAAGGACAACATCAGTTACATGGTGGCGAAAA TGGTTTTGATTGCCAACGTTGGCAATTGGAAAAGTGCGGTGAAAATTTTGTGTGTTTTTCACTTTCTTCGCCAGACGGTG ATCAAGGTTTTCCCGGTCATGTGAAAGTATGTGTAACGTACTTACTGAACGAGCAAAATTGTGTAGAAATTCAATTTGAG GCGGAAAGTGATCAAGATACCCCGCTAAATTTGACCAATCATGCTTATTTTAATCTCAATAACGCGGAGCTTGGTGAGGA CATTCGAGAACATTATTTGCAAGTCAATGCTGACCATTACTTACCTGTGAATCCAGAGGGGATCCCTTGTGCAGCGTTGA AATCCGTACAGGGCACCAGTTTTGATTTTCGTGAGATGAAGTCTATTGAGAAAGACTTTTTACAAGATGAACAAGCCCTA GTAAAAGGGTATGATCATGCCTTTCTATTAAATCAAGACAAAGAAAAACTCAGTGCGGTTCTTACGGCAGCAGACGGTTC TTTACGTTTACAGGTCTCCACCTCTCAACCTGCCTTACAAATATATACTGGGAATTTTCTAGCCGGTACGCCGAATCGTT TCGGCTCATACTATCAGGATTACGTCGGGATTGCGTTAGAAACACAAGCCTTACCTGATACCCCTAATCATCCTGAGTGG TGGACATTGGGCGGCATGAGCCAAGCCGGAGAAAAATATCAACATTGGACCCGTTTTAACTTTTCATCATAA
Upstream 100 bases:
>100_bases AAGTGGAAGCCGTTCGTCAGATTATTGCTGATAATTACGCCCAACAAACGGGTTTAAAAGAAGATTTTTATGTGTGTACT GCCTCACAAGGAGTAAGCGT
Downstream 100 bases:
>100_bases CAATAAATGCGAATTGTCGTTTTTTGCCCCACTGTCTAGGGGCTTTTTTTTGCTATTAAGCAGGAAATATGTTACTTTTC AACGGTCAATGTTGACGGAA
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MLSKCTLGVAPDGQPFQLVTLSNAKGMSIQVMDWGATWLSCKVPVQNQLREVLLGCQLEDYPKQQVYLGATIGRYANRIA NGRFVLNGVPIQLQTNQGQHQLHGGENGFDCQRWQLEKCGENFVCFSLSSPDGDQGFPGHVKVCVTYLLNEQNCVEIQFE AESDQDTPLNLTNHAYFNLNNAELGEDIREHYLQVNADHYLPVNPEGIPCAALKSVQGTSFDFREMKSIEKDFLQDEQAL VKGYDHAFLLNQDKEKLSAVLTAADGSLRLQVSTSQPALQIYTGNFLAGTPNRFGSYYQDYVGIALETQALPDTPNHPEW WTLGGMSQAGEKYQHWTRFNFSS
Sequences:
>Translated_343_residues MLSKCTLGVAPDGQPFQLVTLSNAKGMSIQVMDWGATWLSCKVPVQNQLREVLLGCQLEDYPKQQVYLGATIGRYANRIA NGRFVLNGVPIQLQTNQGQHQLHGGENGFDCQRWQLEKCGENFVCFSLSSPDGDQGFPGHVKVCVTYLLNEQNCVEIQFE AESDQDTPLNLTNHAYFNLNNAELGEDIREHYLQVNADHYLPVNPEGIPCAALKSVQGTSFDFREMKSIEKDFLQDEQAL VKGYDHAFLLNQDKEKLSAVLTAADGSLRLQVSTSQPALQIYTGNFLAGTPNRFGSYYQDYVGIALETQALPDTPNHPEW WTLGGMSQAGEKYQHWTRFNFSS >Mature_343_residues MLSKCTLGVAPDGQPFQLVTLSNAKGMSIQVMDWGATWLSCKVPVQNQLREVLLGCQLEDYPKQQVYLGATIGRYANRIA NGRFVLNGVPIQLQTNQGQHQLHGGENGFDCQRWQLEKCGENFVCFSLSSPDGDQGFPGHVKVCVTYLLNEQNCVEIQFE AESDQDTPLNLTNHAYFNLNNAELGEDIREHYLQVNADHYLPVNPEGIPCAALKSVQGTSFDFREMKSIEKDFLQDEQAL VKGYDHAFLLNQDKEKLSAVLTAADGSLRLQVSTSQPALQIYTGNFLAGTPNRFGSYYQDYVGIALETQALPDTPNHPEW WTLGGMSQAGEKYQHWTRFNFSS
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=350, Percent_Identity=39.4285714285714, Blast_Score=213, Evalue=2e-55, Organism=Escherichia coli, GI1786971, Length=341, Percent_Identity=50.4398826979472, Blast_Score=335, Evalue=2e-93, Organism=Caenorhabditis elegans, GI17557428, Length=303, Percent_Identity=29.7029702970297, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI115533334, Length=303, Percent_Identity=29.7029702970297, Blast_Score=153, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6322004, Length=359, Percent_Identity=29.2479108635098, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6324399, Length=353, Percent_Identity=26.628895184136, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6319493, Length=345, Percent_Identity=26.3768115942029, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI24659048, Length=340, Percent_Identity=35.5882352941176, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24668278, Length=341, Percent_Identity=33.1378299120235, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24583720, Length=348, Percent_Identity=30.7471264367816, Blast_Score=164, Evalue=9e-41, Organism=Drosophila melanogaster, GI24668282, Length=340, Percent_Identity=32.0588235294118, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24641876, Length=346, Percent_Identity=30.635838150289, Blast_Score=152, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR013458 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 38340; Mature: 38340
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00545 ALDOSE_1_EPIMERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKCTLGVAPDGQPFQLVTLSNAKGMSIQVMDWGATWLSCKVPVQNQLREVLLGCQLED CCCCEEEECCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHCCCCCC YPKQQVYLGATIGRYANRIANGRFVLNGVPIQLQTNQGQHQLHGGENGFDCQRWQLEKCG CCCCEEEEEHHHHHHHHHHCCCEEEEECEEEEEECCCCCEEECCCCCCCCCHHHHHHHCC ENFVCFSLSSPDGDQGFPGHVKVCVTYLLNEQNCVEIQFEAESDQDTPLNLTNHAYFNLN CCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEECCEEEEECC NAELGEDIREHYLQVNADHYLPVNPEGIPCAALKSVQGTSFDFREMKSIEKDFLQDEQAL CHHHHHHHHHHHEEECCCCEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH VKGYDHAFLLNQDKEKLSAVLTAADGSLRLQVSTSQPALQIYTGNFLAGTPNRFGSYYQD HCCCCEEEEECCCHHHHEEEEEECCCEEEEEEECCCCEEEEEECCEECCCCHHHHHHHHH YVGIALETQALPDTPNHPEWWTLGGMSQAGEKYQHWTRFNFSS HHCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHEEECCCC >Mature Secondary Structure MLSKCTLGVAPDGQPFQLVTLSNAKGMSIQVMDWGATWLSCKVPVQNQLREVLLGCQLED CCCCEEEECCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHCCCCCC YPKQQVYLGATIGRYANRIANGRFVLNGVPIQLQTNQGQHQLHGGENGFDCQRWQLEKCG CCCCEEEEEHHHHHHHHHHCCCEEEEECEEEEEECCCCCEEECCCCCCCCCHHHHHHHCC ENFVCFSLSSPDGDQGFPGHVKVCVTYLLNEQNCVEIQFEAESDQDTPLNLTNHAYFNLN CCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEECCEEEEECC NAELGEDIREHYLQVNADHYLPVNPEGIPCAALKSVQGTSFDFREMKSIEKDFLQDEQAL CHHHHHHHHHHHEEECCCCEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH VKGYDHAFLLNQDKEKLSAVLTAADGSLRLQVSTSQPALQIYTGNFLAGTPNRFGSYYQD HCCCCEEEEECCCHHHHEEEEEECCCEEEEEEECCCCEEEEEECCEECCCCHHHHHHHHH YVGIALETQALPDTPNHPEWWTLGGMSQAGEKYQHWTRFNFSS HHCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 1282642 [H]